RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 NPHP3Q7Z494 1330 aa18.96■□□□□ 0.63
HMGXB3-202ENST00000503427 TDO2P48775 406 aa18.96■□□□□ 0.63
HMGXB3-202ENST00000503427 FILIP1Q7Z7B0 1213 aa18.96■□□□□ 0.63
HMGXB3-202ENST00000503427 CCDC83Q8IWF9 413 aa18.96■□□□□ 0.63
HMGXB3-202ENST00000503427 LUC7LQ9NQ29 371 aaKnown RBP18.96■□□□□ 0.63
HMGXB3-202ENST00000503427 RAI14Q9P0K7 980 aa18.95■□□□□ 0.62
HMGXB3-202ENST00000503427 PZPP20742 1482 aa18.95■□□□□ 0.62
HMGXB3-202ENST00000503427 ERLIN1O75477 346 aa18.95■□□□□ 0.62
HMGXB3-202ENST00000503427 IFIT1P09914 478 aaKnown RBP18.95■□□□□ 0.62
HMGXB3-202ENST00000503427 HSP90AB2PQ58FF8 381 aa18.95■□□□□ 0.62
HMGXB3-202ENST00000503427 WASF1Q92558 559 aa18.95■□□□□ 0.62
HMGXB3-202ENST00000503427 IFIT5Q13325 482 aaKnown RBP18.95■□□□□ 0.62
HMGXB3-202ENST00000503427 CCDC85AQ96PX6 553 aaPredicted RBP18.95■□□□□ 0.62
HMGXB3-202ENST00000503427 H0YHG0 523 aa18.94■□□□□ 0.62
HMGXB3-202ENST00000503427 IDH1O75874 414 aaKnown RBP18.94■□□□□ 0.62
HMGXB3-202ENST00000503427 IMMTQ16891 758 aaKnown RBP18.94■□□□□ 0.62
HMGXB3-202ENST00000503427 PRPF40BQ6NWY9 871 aaKnown RBP18.94■□□□□ 0.62
HMGXB3-202ENST00000503427 NUP133Q8WUM0 1156 aa18.94■□□□□ 0.62
HMGXB3-202ENST00000503427 SSFA2P28290 1259 aa18.94■□□□□ 0.62
HMGXB3-202ENST00000503427 NGLY1Q96IV0 654 aa18.94■□□□□ 0.62
HMGXB3-202ENST00000503427 BICDL1Q6ZP65 573 aa18.94■□□□□ 0.62
HMGXB3-202ENST00000503427 TXLNBQ8N3L3 684 aa18.94■□□□□ 0.62
HMGXB3-202ENST00000503427 SAMD9Q5K651 1589 aa18.94■□□□□ 0.62
HMGXB3-202ENST00000503427 ZPR1O75312 459 aa18.94■□□□□ 0.62
HMGXB3-202ENST00000503427 UBAC1Q9BSL1 405 aa18.94■□□□□ 0.62
HMGXB3-202ENST00000503427 FAM83GA6ND36 823 aa18.93■□□□□ 0.62
HMGXB3-202ENST00000503427 AIDAQ96BJ3 306 aa18.93■□□□□ 0.62
HMGXB3-202ENST00000503427 KRT18P05783 430 aaKnown RBP18.93■□□□□ 0.62
HMGXB3-202ENST00000503427 TBC1D32Q96NH3 1257 aa18.93■□□□□ 0.62
HMGXB3-202ENST00000503427 U3KPZ7 1027 aaPredicted RBP18.93■□□□□ 0.62
HMGXB3-202ENST00000503427 AXDND1Q5T1B0 1012 aaPredicted RBP18.93■□□□□ 0.62
HMGXB3-202ENST00000503427 FERMT3Q86UX7 667 aa18.93■□□□□ 0.62
HMGXB3-202ENST00000503427 A0A087WZG4 1122 aa18.93■□□□□ 0.62
HMGXB3-202ENST00000503427 DDX11Q96FC9 970 aa18.93■□□□□ 0.62
HMGXB3-202ENST00000503427 ZMYM3Q14202 1370 aa18.93■□□□□ 0.62
HMGXB3-202ENST00000503427 KIF2AO00139 706 aaPredicted RBP18.92■□□□□ 0.62
HMGXB3-202ENST00000503427 SNRPA1P09661 255 aaKnown RBP18.92■□□□□ 0.62
HMGXB3-202ENST00000503427 LIMCH1Q9UPQ0 1083 aa18.91■□□□□ 0.62
HMGXB3-202ENST00000503427 ATP7AQ04656 1500 aa18.91■□□□□ 0.62
HMGXB3-202ENST00000503427 PIK3C2GO75747 1445 aa18.91■□□□□ 0.62
HMGXB3-202ENST00000503427 NPATQ14207 1427 aa18.91■□□□□ 0.62
HMGXB3-202ENST00000503427 EIF3JO75822 258 aaKnown RBP18.91■□□□□ 0.62
HMGXB3-202ENST00000503427 IGHDP01880 384 aa18.91■□□□□ 0.62
HMGXB3-202ENST00000503427 TRMT112Q9UI30 125 aaKnown RBP18.91■□□□□ 0.62
HMGXB3-202ENST00000503427 RDXP35241 583 aaKnown RBP18.91■□□□□ 0.62
HMGXB3-202ENST00000503427 CAVIN4Q5BKX8 364 aa18.91■□□□□ 0.62
HMGXB3-202ENST00000503427 PDCL2Q8N4E4 241 aa18.91■□□□□ 0.62
HMGXB3-202ENST00000503427 POLKQ9UBT6 870 aa18.91■□□□□ 0.62
HMGXB3-202ENST00000503427 ZFYVE9O95405 1425 aa18.91■□□□□ 0.62
HMGXB3-202ENST00000503427 MAST1Q9Y2H9 1570 aa18.91■□□□□ 0.62
HMGXB3-202ENST00000503427 TBC1D9Q6ZT07 1266 aa18.9■□□□□ 0.62
HMGXB3-202ENST00000503427 DEF6Q9H4E7 631 aa18.9■□□□□ 0.62
HMGXB3-202ENST00000503427 MAP3K2Q9Y2U5 619 aa18.9■□□□□ 0.62
HMGXB3-202ENST00000503427 BOLA2Q9H3K6 86 aa18.9■□□□□ 0.62
HMGXB3-202ENST00000503427 ABCC1P33527 1531 aa18.9■□□□□ 0.62
HMGXB3-202ENST00000503427 CEP170Q5SW79 1584 aa18.9■□□□□ 0.62
HMGXB3-202ENST00000503427 UHRF1BP1Q6BDS2 1440 aa18.9■□□□□ 0.62
HMGXB3-202ENST00000503427 CAMK4Q16566 473 aa18.9■□□□□ 0.62
HMGXB3-202ENST00000503427 ZFYVE27Q5T4F4 411 aa18.9■□□□□ 0.62
HMGXB3-202ENST00000503427 FAM177A1Q8N128 213 aaPredicted RBP18.9■□□□□ 0.62
HMGXB3-202ENST00000503427 FLT4P35916 1363 aa18.9■□□□□ 0.62
HMGXB3-202ENST00000503427 ANO10Q9NW15 660 aa18.89■□□□□ 0.62
HMGXB3-202ENST00000503427 SOGA3Q5TF21 947 aa18.89■□□□□ 0.61
HMGXB3-202ENST00000503427 TBX22Q9Y458 520 aa18.89■□□□□ 0.61
HMGXB3-202ENST00000503427 YTHDC2Q9H6S0 1430 aaKnown RBP18.89■□□□□ 0.61
HMGXB3-202ENST00000503427 ANKRD18BA2A2Z9 1011 aa18.89■□□□□ 0.61
HMGXB3-202ENST00000503427 HMGB1P09429 215 aaKnown RBP18.89■□□□□ 0.61
HMGXB3-202ENST00000503427 FBLN1P23142 703 aa18.89■□□□□ 0.61
HMGXB3-202ENST00000503427 TRPM2O94759 1503 aa18.89■□□□□ 0.61
HMGXB3-202ENST00000503427 PI4KAP2A4QPH2 592 aa18.88■□□□□ 0.61
HMGXB3-202ENST00000503427 EIF4A2Q14240 407 aaKnown RBP18.88■□□□□ 0.61
HMGXB3-202ENST00000503427 PI4KAP1Q8N8J0 262 aa18.88■□□□□ 0.61
HMGXB3-202ENST00000503427 ABCF2Q9UG63 623 aa18.88■□□□□ 0.61
HMGXB3-202ENST00000503427 CEP131Q9UPN4 1083 aa18.88■□□□□ 0.61
HMGXB3-202ENST00000503427 CCDC181Q5TID7 509 aa18.88■□□□□ 0.61
HMGXB3-202ENST00000503427 STK11IPQ8N1F8 1099 aa18.88■□□□□ 0.61
HMGXB3-202ENST00000503427 HDAC1Q13547 482 aaPredicted RBP18.88■□□□□ 0.61
HMGXB3-202ENST00000503427 ATP2B2Q01814 1243 aa18.88■□□□□ 0.61
HMGXB3-202ENST00000503427 ATP10AO60312 1499 aa18.88■□□□□ 0.61
HMGXB3-202ENST00000503427 CHRNA2Q15822 529 aa18.87■□□□□ 0.61
HMGXB3-202ENST00000503427 ECHDC1Q9NTX5 307 aa18.87■□□□□ 0.61
HMGXB3-202ENST00000503427 SYCP1Q15431 976 aa18.87■□□□□ 0.61
HMGXB3-202ENST00000503427 CFAP100Q494V2 611 aa18.87■□□□□ 0.61
HMGXB3-202ENST00000503427 CWC25Q9NXE8 425 aaPredicted RBP18.87■□□□□ 0.61
HMGXB3-202ENST00000503427 ERLIN2O94905 339 aa18.87■□□□□ 0.61
HMGXB3-202ENST00000503427 SLC5A1P13866 664 aa18.87■□□□□ 0.61
HMGXB3-202ENST00000503427 SFPQP23246 707 aaKnown RBP eCLIP18.87■□□□□ 0.61
HMGXB3-202ENST00000503427 AKAP4Q5JQC9 854 aa18.87■□□□□ 0.61
HMGXB3-202ENST00000503427 C19orf44Q9H6X5 657 aa18.87■□□□□ 0.61
HMGXB3-202ENST00000503427 UBXN4Q92575 508 aa18.87■□□□□ 0.61
HMGXB3-202ENST00000503427 ZNF287Q9HBT7 754 aa18.87■□□□□ 0.61
HMGXB3-202ENST00000503427 MAP3K12Q12852 859 aa18.86■□□□□ 0.61
HMGXB3-202ENST00000503427 CCDC8Q9H0W5 538 aaPredicted RBP18.86■□□□□ 0.61
HMGXB3-202ENST00000503427 ZBTB3Q9H5J0 574 aa18.86■□□□□ 0.61
HMGXB3-202ENST00000503427 CTAGE5O15320 804 aa18.86■□□□□ 0.61
HMGXB3-202ENST00000503427 IQCEQ6IPM2 695 aa18.86■□□□□ 0.61
HMGXB3-202ENST00000503427 PTPN14Q15678 1187 aa18.86■□□□□ 0.61
HMGXB3-202ENST00000503427 GOLGA6L10A6NI86 522 aa18.85■□□□□ 0.61
HMGXB3-202ENST00000503427 RBM5P52756 815 aaKnown RBP eCLIP18.85■□□□□ 0.61
HMGXB3-202ENST00000503427 CCDC191Q8NCU4 936 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms