RNA–Protein interactions for RNA: ENST00000498519.5

SHANK2-217, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 510 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-217ENST00000498519 CCER1Q8TC90 406 aaPredicted RBP18.47■□□□□ 0.55
SHANK2-217ENST00000498519 PDZRN3Q9UPQ7 1066 aa18.47■□□□□ 0.55
SHANK2-217ENST00000498519 N4BP2Q86UW6 1770 aaPredicted RBP18.47■□□□□ 0.55
SHANK2-217ENST00000498519 HMOX1P09601 288 aa18.46■□□□□ 0.55
SHANK2-217ENST00000498519 LMNB1P20700 586 aa18.46■□□□□ 0.55
SHANK2-217ENST00000498519 SLC39A6Q13433 755 aa18.46■□□□□ 0.55
SHANK2-217ENST00000498519 TTLL6Q8N841 843 aa18.46■□□□□ 0.55
SHANK2-217ENST00000498519 SMC1BQ8NDV3 1235 aa18.46■□□□□ 0.55
SHANK2-217ENST00000498519 TEX13AQ9BXU3 409 aaPredicted RBP18.46■□□□□ 0.55
SHANK2-217ENST00000498519 RRAGCQ9HB90 399 aa18.46■□□□□ 0.55
SHANK2-217ENST00000498519 H0YIN7 160 aa18.45■□□□□ 0.54
SHANK2-217ENST00000498519 SERPINB2P05120 415 aa18.45■□□□□ 0.54
SHANK2-217ENST00000498519 MTHFSDQ2M296 383 aaKnown RBP18.45■□□□□ 0.54
SHANK2-217ENST00000498519 NPM2Q86SE8 214 aaKnown RBP18.45■□□□□ 0.54
SHANK2-217ENST00000498519 ZBTB1Q9Y2K1 713 aa18.45■□□□□ 0.54
SHANK2-217ENST00000498519 MRC1P22897 1456 aa18.45■□□□□ 0.54
SHANK2-217ENST00000498519 KLRG1Q96E93 195 aa18.44■□□□□ 0.54
SHANK2-217ENST00000498519 KCPQ6ZWJ8 1503 aa18.44■□□□□ 0.54
SHANK2-217ENST00000498519 TEFQ10587 303 aa18.43■□□□□ 0.54
SHANK2-217ENST00000498519 VEGFAP15692 232 aaPredicted RBP18.42■□□□□ 0.54
SHANK2-217ENST00000498519 CANXP27824 592 aaKnown RBP18.42■□□□□ 0.54
SHANK2-217ENST00000498519 C2CD5Q86YS7 1000 aa18.42■□□□□ 0.54
SHANK2-217ENST00000498519 GAS2L2Q8NHY3 880 aa18.42■□□□□ 0.54
SHANK2-217ENST00000498519 MYH14Q7Z406 1995 aaKnown RBP18.42■□□□□ 0.54
SHANK2-217ENST00000498519 TJP1Q07157 1748 aa18.41■□□□□ 0.54
SHANK2-217ENST00000498519 GLTPD2A6NH11 291 aa18.41■□□□□ 0.54
SHANK2-217ENST00000498519 PDE6BP35913 854 aa18.41■□□□□ 0.54
SHANK2-217ENST00000498519 JMYQ8N9B5 988 aa18.41■□□□□ 0.54
SHANK2-217ENST00000498519 KIF7Q2M1P5 1343 aa18.41■□□□□ 0.54
SHANK2-217ENST00000498519 EIF5P55010 431 aaKnown RBP18.4■□□□□ 0.54
SHANK2-217ENST00000498519 DPY19L2Q6NUT2 758 aa18.4■□□□□ 0.54
SHANK2-217ENST00000498519 BCL2L12Q9HB09 334 aa18.4■□□□□ 0.54
SHANK2-217ENST00000498519 ARFGEF1Q9Y6D6 1849 aa18.39■□□□□ 0.54
SHANK2-217ENST00000498519 GNAT3A8MTJ3 354 aa18.39■□□□□ 0.53
SHANK2-217ENST00000498519 CC2D1BQ5T0F9 858 aaKnown RBP18.39■□□□□ 0.53
SHANK2-217ENST00000498519 ZNF790Q6PG37 636 aa18.39■□□□□ 0.53
SHANK2-217ENST00000498519 BRIP1Q9BX63 1249 aa18.39■□□□□ 0.53
SHANK2-217ENST00000498519 BRCA1P38398 1863 aaKnown RBP18.39■□□□□ 0.53
SHANK2-217ENST00000498519 PER1O15534 1290 aaPredicted RBP18.38■□□□□ 0.53
SHANK2-217ENST00000498519 RASSF7Q02833 373 aa18.38■□□□□ 0.53
SHANK2-217ENST00000498519 SCN11AQ9UI33 1791 aa18.37■□□□□ 0.53
SHANK2-217ENST00000498519 U2SURPO15042 1029 aaKnown RBP18.37■□□□□ 0.53
SHANK2-217ENST00000498519 IL6STP40189 918 aaPredicted RBP18.37■□□□□ 0.53
SHANK2-217ENST00000498519 BICDL1Q6ZP65 573 aa18.37■□□□□ 0.53
SHANK2-217ENST00000498519 FMNL2Q96PY5 1086 aa18.37■□□□□ 0.53
SHANK2-217ENST00000498519 NPHP1O15259 732 aa18.36■□□□□ 0.53
SHANK2-217ENST00000498519 CARMIL3Q8ND23 1372 aa18.36■□□□□ 0.53
SHANK2-217ENST00000498519 ZNF622Q969S3 477 aaKnown RBP eCLIP18.36■□□□□ 0.53
SHANK2-217ENST00000498519 ZNF496Q96IT1 587 aaPredicted RBP18.36■□□□□ 0.53
SHANK2-217ENST00000498519 NPC1L1Q9UHC9 1359 aa18.36■□□□□ 0.53
SHANK2-217ENST00000498519 HEG1Q9ULI3 1381 aa18.36■□□□□ 0.53
SHANK2-217ENST00000498519 ADAMTS7Q9UKP4 1686 aa18.35■□□□□ 0.53
SHANK2-217ENST00000498519 SOGA3Q5TF21 947 aa18.35■□□□□ 0.53
SHANK2-217ENST00000498519 SETDB2Q96T68 719 aa18.35■□□□□ 0.53
SHANK2-217ENST00000498519 ST5P78524 1137 aa18.34■□□□□ 0.53
SHANK2-217ENST00000498519 CNKSR1Q969H4 720 aa18.34■□□□□ 0.53
SHANK2-217ENST00000498519 CFAP53Q96M91 514 aa18.34■□□□□ 0.53
SHANK2-217ENST00000498519 ZNF330Q9Y3S2 320 aaPredicted RBP18.34■□□□□ 0.53
SHANK2-217ENST00000498519 NFKBIEO00221 500 aa18.33■□□□□ 0.52
SHANK2-217ENST00000498519 HTRA3P83110 453 aa18.33■□□□□ 0.52
SHANK2-217ENST00000498519 TBC1D9BQ66K14 1250 aa18.33■□□□□ 0.52
SHANK2-217ENST00000498519 CNBD1Q8NA66 436 aa18.33■□□□□ 0.52
SHANK2-217ENST00000498519 IL17REQ8NFR9 667 aa18.33■□□□□ 0.52
SHANK2-217ENST00000498519 TNRC6CQ9HCJ0 1690 aaKnown RBP18.33■□□□□ 0.52
SHANK2-217ENST00000498519 ERFEQ4G0M1 354 aa18.32■□□□□ 0.52
SHANK2-217ENST00000498519 PRR5LQ6MZQ0 368 aa18.32■□□□□ 0.52
SHANK2-217ENST00000498519 TBC1D2BQ9UPU7 963 aa18.32■□□□□ 0.52
SHANK2-217ENST00000498519 BTBD11A6QL63 1104 aa18.31■□□□□ 0.52
SHANK2-217ENST00000498519 C21orf2O43822 256 aa18.31■□□□□ 0.52
SHANK2-217ENST00000498519 TAOK3Q9H2K8 898 aa18.31■□□□□ 0.52
SHANK2-217ENST00000498519 NUDCQ9Y266 331 aa18.31■□□□□ 0.52
SHANK2-217ENST00000498519 WDR90Q96KV7 1748 aa18.31■□□□□ 0.52
SHANK2-217ENST00000498519 LTBP3Q9NS15 1303 aa18.3■□□□□ 0.52
SHANK2-217ENST00000498519 NRXN2Q9P2S2 1712 aa18.3■□□□□ 0.52
SHANK2-217ENST00000498519 STYK1Q6J9G0 422 aa18.3■□□□□ 0.52
SHANK2-217ENST00000498519 ZNF652Q9Y2D9 606 aa18.3■□□□□ 0.52
SHANK2-217ENST00000498519 PRELPP51888 382 aa18.29■□□□□ 0.52
SHANK2-217ENST00000498519 CLEC4GQ6UXB4 293 aa18.29■□□□□ 0.52
SHANK2-217ENST00000498519 RTF1Q92541 710 aaKnown RBP18.29■□□□□ 0.52
SHANK2-217ENST00000498519 MASTLQ96GX5 879 aa18.29■□□□□ 0.52
SHANK2-217ENST00000498519 CEMIPQ8WUJ3 1361 aa18.29■□□□□ 0.52
SHANK2-217ENST00000498519 RGL2O15211 777 aa18.28■□□□□ 0.52
SHANK2-217ENST00000498519 CAMTA2O94983 1202 aa18.28■□□□□ 0.52
SHANK2-217ENST00000498519 DZIP3Q86Y13 1208 aaKnown RBP18.28■□□□□ 0.52
SHANK2-217ENST00000498519 A1BGP04217 495 aa18.27■□□□□ 0.52
SHANK2-217ENST00000498519 SRGNP10124 158 aa18.27■□□□□ 0.52
SHANK2-217ENST00000498519 IQCA1LA6NCM1 817 aa18.26■□□□□ 0.51
SHANK2-217ENST00000498519 SNRPA1P09661 255 aaKnown RBP18.26■□□□□ 0.51
SHANK2-217ENST00000498519 PRKAR2BP31323 418 aa18.26■□□□□ 0.51
SHANK2-217ENST00000498519 COL13A1Q5TAT6 717 aaPredicted RBP18.26■□□□□ 0.51
SHANK2-217ENST00000498519 NBPF5PQ86XG9 351 aaPredicted RBP18.26■□□□□ 0.51
SHANK2-217ENST00000498519 TNS4Q8IZW8 715 aa18.26■□□□□ 0.51
SHANK2-217ENST00000498519 ZNF219Q9P2Y4 722 aaPredicted RBP18.26■□□□□ 0.51
SHANK2-217ENST00000498519 COL3A1P02461 1466 aaPredicted RBP18.26■□□□□ 0.51
SHANK2-217ENST00000498519 CHADLQ6NUI6 762 aa18.25■□□□□ 0.51
SHANK2-217ENST00000498519 PRPF40BQ6NWY9 871 aaKnown RBP18.25■□□□□ 0.51
SHANK2-217ENST00000498519 UBR2Q8IWV8 1755 aa18.25■□□□□ 0.51
SHANK2-217ENST00000498519 CNGB1Q14028 1251 aaPredicted RBP18.24■□□□□ 0.51
SHANK2-217ENST00000498519 TPTE2Q6XPS3 522 aa18.24■□□□□ 0.51
SHANK2-217ENST00000498519 CREBZFQ9NS37 354 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms