RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 CCT4P50991 539 aaKnown RBP30.85■■■□□ 2.53
PPP1R3F-205ENST00000495799 MARCH10Q8NA82 808 aaPredicted RBP30.85■■■□□ 2.53
PPP1R3F-205ENST00000495799 PIGBQ92521 554 aa30.85■■■□□ 2.53
PPP1R3F-205ENST00000495799 N4BP2Q86UW6 1770 aaPredicted RBP30.84■■■□□ 2.53
PPP1R3F-205ENST00000495799 CENPQQ7L2Z9 268 aaPredicted RBP30.84■■■□□ 2.53
PPP1R3F-205ENST00000495799 ERBB4Q15303 1308 aa30.84■■■□□ 2.53
PPP1R3F-205ENST00000495799 PRAMEF22A3QJZ6 481 aa30.83■■■□□ 2.53
PPP1R3F-205ENST00000495799 A0A0G2JS52 829 aa30.83■■■□□ 2.53
PPP1R3F-205ENST00000495799 MYT1Q01538 1121 aa30.83■■■□□ 2.53
PPP1R3F-205ENST00000495799 ZBTB40Q9NUA8 1239 aa30.83■■■□□ 2.53
PPP1R3F-205ENST00000495799 ZBTB7BO15156 539 aaPredicted RBP30.81■■■□□ 2.52
PPP1R3F-205ENST00000495799 VSIG10Q8N0Z9 540 aa30.81■■■□□ 2.52
PPP1R3F-205ENST00000495799 PHAXQ9H814 394 aaKnown RBP30.81■■■□□ 2.52
PPP1R3F-205ENST00000495799 SYTL4Q96C24 671 aaPredicted RBP30.8■■■□□ 2.52
PPP1R3F-205ENST00000495799 TEX13AQ9BXU3 409 aaPredicted RBP30.8■■■□□ 2.52
PPP1R3F-205ENST00000495799 ATG3Q9NT62 314 aa30.79■■■□□ 2.52
PPP1R3F-205ENST00000495799 DDX58O95786 925 aaKnown RBP30.78■■■□□ 2.52
PPP1R3F-205ENST00000495799 PRIM1P49642 420 aaKnown RBP30.78■■■□□ 2.52
PPP1R3F-205ENST00000495799 SLC4A10Q6U841 1118 aa30.78■■■□□ 2.52
PPP1R3F-205ENST00000495799 KDM2BQ8NHM5 1336 aa30.78■■■□□ 2.52
PPP1R3F-205ENST00000495799 PTCD1O75127 700 aaKnown RBP30.78■■■□□ 2.52
PPP1R3F-205ENST00000495799 USP16Q9Y5T5 823 aa30.78■■■□□ 2.52
PPP1R3F-205ENST00000495799 F6X3S4 739 aa30.77■■■□□ 2.52
PPP1R3F-205ENST00000495799 RWDD1Q9H446 243 aaPredicted RBP30.77■■■□□ 2.52
PPP1R3F-205ENST00000495799 ASAP1Q9ULH1 1129 aa30.77■■■□□ 2.52
PPP1R3F-205ENST00000495799 KAT6BQ8WYB5 2073 aa30.75■■■□□ 2.51
PPP1R3F-205ENST00000495799 PDIA6Q15084 440 aa30.75■■■□□ 2.51
PPP1R3F-205ENST00000495799 PCDHB15Q9Y5E8 787 aa30.75■■■□□ 2.51
PPP1R3F-205ENST00000495799 ONECUT3O60422 494 aaPredicted RBP30.74■■■□□ 2.51
PPP1R3F-205ENST00000495799 ANXA1P04083 346 aa30.74■■■□□ 2.51
PPP1R3F-205ENST00000495799 PROSER3Q2NL68 480 aa30.73■■■□□ 2.51
PPP1R3F-205ENST00000495799 DNAAF4Q8WXU2 420 aa30.73■■■□□ 2.51
PPP1R3F-205ENST00000495799 QTRT2Q9H974 415 aaKnown RBP30.73■■■□□ 2.51
PPP1R3F-205ENST00000495799 ATP10DQ9P241 1426 aa30.72■■■□□ 2.51
PPP1R3F-205ENST00000495799 KSR2Q6VAB6 950 aa30.71■■■□□ 2.51
PPP1R3F-205ENST00000495799 ACSBG1Q96GR2 724 aa30.71■■■□□ 2.51
PPP1R3F-205ENST00000495799 RBM42Q9BTD8 480 aaKnown RBP30.71■■■□□ 2.51
PPP1R3F-205ENST00000495799 PI4KAP2A4QPH2 592 aa30.7■■■□□ 2.51
PPP1R3F-205ENST00000495799 MYL6BP14649 208 aa30.7■■■□□ 2.51
PPP1R3F-205ENST00000495799 HDAC1Q13547 482 aaPredicted RBP30.7■■■□□ 2.51
PPP1R3F-205ENST00000495799 PI4KAP1Q8N8J0 262 aa30.7■■■□□ 2.51
PPP1R3F-205ENST00000495799 ADCY9O60503 1353 aa30.69■■■□□ 2.5
PPP1R3F-205ENST00000495799 STARD3NLO95772 234 aa30.69■■■□□ 2.5
PPP1R3F-205ENST00000495799 ZNF772Q68DY9 489 aaPredicted RBP30.69■■■□□ 2.5
PPP1R3F-205ENST00000495799 SMARCC1Q92922 1105 aaPredicted RBP30.69■■■□□ 2.5
PPP1R3F-205ENST00000495799 SRCIN1Q9C0H9 1055 aa30.69■■■□□ 2.5
PPP1R3F-205ENST00000495799 GNAI3P08754 354 aa30.68■■■□□ 2.5
PPP1R3F-205ENST00000495799 IGHDP01880 384 aa30.67■■■□□ 2.5
PPP1R3F-205ENST00000495799 FBXO41Q8TF61 875 aa30.66■■■□□ 2.5
PPP1R3F-205ENST00000495799 XAGE3Q8WTP9 111 aa30.66■■■□□ 2.5
PPP1R3F-205ENST00000495799 MAP3K2Q9Y2U5 619 aa30.66■■■□□ 2.5
PPP1R3F-205ENST00000495799 AIMP1Q12904 312 aaKnown RBP30.65■■■□□ 2.5
PPP1R3F-205ENST00000495799 SEPT12Q8IYM1 358 aa30.65■■■□□ 2.5
PPP1R3F-205ENST00000495799 NHSQ6T4R5 1651 aa30.65■■■□□ 2.5
PPP1R3F-205ENST00000495799 COPS6Q7L5N1 327 aa30.64■■■□□ 2.5
PPP1R3F-205ENST00000495799 LRP10Q7Z4F1 713 aa30.64■■■□□ 2.5
PPP1R3F-205ENST00000495799 RIC3Q7Z5B4 369 aa30.64■■■□□ 2.5
PPP1R3F-205ENST00000495799 CICQ96RK0 1608 aaPredicted RBP30.64■■■□□ 2.5
PPP1R3F-205ENST00000495799 BEND3Q5T5X7 828 aa30.63■■■□□ 2.49
PPP1R3F-205ENST00000495799 DNAJC10Q8IXB1 793 aa30.63■■■□□ 2.49
PPP1R3F-205ENST00000495799 MEIS3Q99687 375 aa30.63■■■□□ 2.49
PPP1R3F-205ENST00000495799 TJP1Q07157 1748 aa30.63■■■□□ 2.49
PPP1R3F-205ENST00000495799 ALDH1L1O75891 902 aa30.63■■■□□ 2.49
PPP1R3F-205ENST00000495799 NEXNQ0ZGT2 675 aa30.61■■■□□ 2.49
PPP1R3F-205ENST00000495799 ANKRD13DQ6ZTN6 518 aa30.61■■■□□ 2.49
PPP1R3F-205ENST00000495799 RPAP2Q8IXW5 612 aaPredicted RBP30.61■■■□□ 2.49
PPP1R3F-205ENST00000495799 PALLDQ8WX93 1383 aa30.61■■■□□ 2.49
PPP1R3F-205ENST00000495799 IBTKQ9P2D0 1353 aaPredicted RBP30.61■■■□□ 2.49
PPP1R3F-205ENST00000495799 ZNF831Q5JPB2 1677 aa30.6■■■□□ 2.49
PPP1R3F-205ENST00000495799 NBPF26B4DH59 902 aa30.6■■■□□ 2.49
PPP1R3F-205ENST00000495799 A1BGP04217 495 aa30.6■■■□□ 2.49
PPP1R3F-205ENST00000495799 GNAI2P04899 355 aa30.6■■■□□ 2.49
PPP1R3F-205ENST00000495799 NBPF14Q5TI25 921 aa30.6■■■□□ 2.49
PPP1R3F-205ENST00000495799 NBPF10Q6P3W6 841 aaKnown RBP30.6■■■□□ 2.49
PPP1R3F-205ENST00000495799 NBPF15Q8N660 670 aa30.6■■■□□ 2.49
PPP1R3F-205ENST00000495799 C1orf115Q9H7X2 142 aa30.6■■■□□ 2.49
PPP1R3F-205ENST00000495799 LINS1Q8NG48 757 aa30.58■■■□□ 2.49
PPP1R3F-205ENST00000495799 PLBD2Q8NHP8 589 aa30.58■■■□□ 2.49
PPP1R3F-205ENST00000495799 HDAC5Q9UQL6 1122 aa30.58■■■□□ 2.49
PPP1R3F-205ENST00000495799 ARFGEF2Q9Y6D5 1785 aa30.58■■■□□ 2.49
PPP1R3F-205ENST00000495799 KCNQ2O43526 872 aa30.57■■■□□ 2.48
PPP1R3F-205ENST00000495799 UBTFL1P0CB47 393 aaPredicted RBP30.57■■■□□ 2.48
PPP1R3F-205ENST00000495799 CYP19A1P11511 503 aaPredicted RBP30.57■■■□□ 2.48
PPP1R3F-205ENST00000495799 PIP4K2AP48426 406 aaPredicted RBP30.57■■■□□ 2.48
PPP1R3F-205ENST00000495799 RBM6P78332 1123 aaKnown RBP30.57■■■□□ 2.48
PPP1R3F-205ENST00000495799 METTL22Q9BUU2 404 aaPredicted RBP30.57■■■□□ 2.48
PPP1R3F-205ENST00000495799 LOC102724428A0A0B4J2F2 783 aa30.56■■■□□ 2.48
PPP1R3F-205ENST00000495799 SIK1P57059 783 aa30.56■■■□□ 2.48
PPP1R3F-205ENST00000495799 ANKRD44Q8N8A2 993 aa30.56■■■□□ 2.48
PPP1R3F-205ENST00000495799 SLC4A9Q96Q91 983 aa30.56■■■□□ 2.48
PPP1R3F-205ENST00000495799 USP44Q9H0E7 712 aa30.55■■■□□ 2.48
PPP1R3F-205ENST00000495799 BTAF1O14981 1849 aa30.54■■■□□ 2.48
PPP1R3F-205ENST00000495799 SBF2Q86WG5 1849 aa30.54■■■□□ 2.48
PPP1R3F-205ENST00000495799 HMMRO75330 724 aa30.53■■■□□ 2.48
PPP1R3F-205ENST00000495799 ATP6V1AP38606 617 aa30.53■■■□□ 2.48
PPP1R3F-205ENST00000495799 CEP85Q6P2H3 762 aa30.53■■■□□ 2.48
PPP1R3F-205ENST00000495799 GCC1Q96CN9 775 aa30.53■■■□□ 2.48
PPP1R3F-205ENST00000495799 NUP188Q5SRE5 1749 aa30.53■■■□□ 2.48
PPP1R3F-205ENST00000495799 SMC5Q8IY18 1101 aa30.52■■■□□ 2.48
PPP1R3F-205ENST00000495799 KIF6Q6ZMV9 814 aa30.51■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms