RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 DDR1Q08345 913 aa31.66■■■□□ 2.66
RHBDD3-206ENST00000493894 USPL1Q5W0Q7 1092 aa31.66■■■□□ 2.66
RHBDD3-206ENST00000493894 ZNF790Q6PG37 636 aa31.66■■■□□ 2.66
RHBDD3-206ENST00000493894 BCS1LQ9Y276 419 aa31.65■■■□□ 2.66
RHBDD3-206ENST00000493894 STARD3NLO95772 234 aa31.64■■■□□ 2.66
RHBDD3-206ENST00000493894 DPEP1P16444 411 aa31.64■■■□□ 2.66
RHBDD3-206ENST00000493894 C1QTNF8P60827 252 aa31.64■■■□□ 2.66
RHBDD3-206ENST00000493894 ZNF496Q96IT1 587 aaPredicted RBP31.64■■■□□ 2.66
RHBDD3-206ENST00000493894 HEG1Q9ULI3 1381 aa31.64■■■□□ 2.66
RHBDD3-206ENST00000493894 NARFQ9UHQ1 456 aa31.63■■■□□ 2.65
RHBDD3-206ENST00000493894 BRCA1P38398 1863 aaKnown RBP31.63■■■□□ 2.65
RHBDD3-206ENST00000493894 POLRMTO00411 1230 aaKnown RBP31.61■■■□□ 2.65
RHBDD3-206ENST00000493894 FCHSD2O94868 740 aa31.61■■■□□ 2.65
RHBDD3-206ENST00000493894 CANXP27824 592 aaKnown RBP31.61■■■□□ 2.65
RHBDD3-206ENST00000493894 TM4SF1P30408 202 aa31.6■■■□□ 2.65
RHBDD3-206ENST00000493894 TEX13AQ9BXU3 409 aaPredicted RBP31.6■■■□□ 2.65
RHBDD3-206ENST00000493894 FMNL2Q96PY5 1086 aa31.59■■■□□ 2.65
RHBDD3-206ENST00000493894 RTF1Q92541 710 aaKnown RBP31.58■■■□□ 2.65
RHBDD3-206ENST00000493894 BTBD11A6QL63 1104 aa31.57■■■□□ 2.64
RHBDD3-206ENST00000493894 GPBP1L1Q9HC44 474 aaPredicted RBP31.57■■■□□ 2.64
RHBDD3-206ENST00000493894 A0A087WZG4 1122 aa31.55■■■□□ 2.64
RHBDD3-206ENST00000493894 EIF5P55010 431 aaKnown RBP31.55■■■□□ 2.64
RHBDD3-206ENST00000493894 NFIXQ14938 502 aa31.55■■■□□ 2.64
RHBDD3-206ENST00000493894 SCN7AQ01118 1682 aa31.54■■■□□ 2.64
RHBDD3-206ENST00000493894 ARFGEF1Q9Y6D6 1849 aa31.54■■■□□ 2.64
RHBDD3-206ENST00000493894 KCNA3P22001 575 aa31.54■■■□□ 2.64
RHBDD3-206ENST00000493894 BCL2L12Q9HB09 334 aa31.54■■■□□ 2.64
RHBDD3-206ENST00000493894 PIM2Q9P1W9 311 aa31.54■■■□□ 2.64
RHBDD3-206ENST00000493894 NRXN2Q9P2S2 1712 aa31.53■■■□□ 2.64
RHBDD3-206ENST00000493894 SENP3-EIF4A1A0A087X0R7 540 aa31.53■■■□□ 2.64
RHBDD3-206ENST00000493894 MCM10Q7L590 875 aa31.53■■■□□ 2.64
RHBDD3-206ENST00000493894 AFDNP55196 1824 aaKnown RBP31.53■■■□□ 2.64
RHBDD3-206ENST00000493894 ZNF526Q8TF50 670 aaPredicted RBP31.52■■■□□ 2.64
RHBDD3-206ENST00000493894 ZNF330Q9Y3S2 320 aaPredicted RBP31.52■■■□□ 2.64
RHBDD3-206ENST00000493894 NEFMP07197 916 aa31.51■■■□□ 2.63
RHBDD3-206ENST00000493894 ARHGAP27Q6ZUM4 889 aa31.51■■■□□ 2.63
RHBDD3-206ENST00000493894 KCNQ3O43525 872 aa31.5■■■□□ 2.63
RHBDD3-206ENST00000493894 IL6STP40189 918 aaPredicted RBP31.5■■■□□ 2.63
RHBDD3-206ENST00000493894 DALRD3Q5D0E6 543 aaKnown RBP31.5■■■□□ 2.63
RHBDD3-206ENST00000493894 HTATSF1O43719 755 aaKnown RBP31.49■■■□□ 2.63
RHBDD3-206ENST00000493894 CHRNA5P30532 468 aa31.49■■■□□ 2.63
RHBDD3-206ENST00000493894 SERPINB2P05120 415 aa31.48■■■□□ 2.63
RHBDD3-206ENST00000493894 NPM2Q86SE8 214 aaKnown RBP31.48■■■□□ 2.63
RHBDD3-206ENST00000493894 DCTN1Q14203 1278 aa31.46■■■□□ 2.63
RHBDD3-206ENST00000493894 BICDL1Q6ZP65 573 aa31.45■■■□□ 2.63
RHBDD3-206ENST00000493894 A1BGP04217 495 aa31.44■■■□□ 2.62
RHBDD3-206ENST00000493894 TBC1D2BQ9UPU7 963 aa31.44■■■□□ 2.62
RHBDD3-206ENST00000493894 DLEC1Q9Y238 1755 aa31.43■■■□□ 2.62
RHBDD3-206ENST00000493894 SNRPA1P09661 255 aaKnown RBP31.42■■■□□ 2.62
RHBDD3-206ENST00000493894 BCORQ6W2J9 1755 aa31.42■■■□□ 2.62
RHBDD3-206ENST00000493894 TBC1D9BQ66K14 1250 aa31.41■■■□□ 2.62
RHBDD3-206ENST00000493894 USP16Q9Y5T5 823 aa31.41■■■□□ 2.62
RHBDD3-206ENST00000493894 DLG5Q8TDM6 1919 aa31.41■■■□□ 2.62
RHBDD3-206ENST00000493894 CARMIL3Q8ND23 1372 aa31.41■■■□□ 2.62
RHBDD3-206ENST00000493894 PRAMEF22A3QJZ6 481 aa31.38■■■□□ 2.61
RHBDD3-206ENST00000493894 TAF7Q15545 349 aaPredicted RBP31.38■■■□□ 2.61
RHBDD3-206ENST00000493894 DZIP3Q86Y13 1208 aaKnown RBP31.38■■■□□ 2.61
RHBDD3-206ENST00000493894 PLEKHF1Q96S99 279 aa31.38■■■□□ 2.61
RHBDD3-206ENST00000493894 PNNQ9H307 717 aaKnown RBP31.38■■■□□ 2.61
RHBDD3-206ENST00000493894 CAMTA2O94983 1202 aa31.37■■■□□ 2.61
RHBDD3-206ENST00000493894 MAPK8IP3Q9UPT6 1336 aa31.37■■■□□ 2.61
RHBDD3-206ENST00000493894 RALBP1Q15311 655 aa31.36■■■□□ 2.61
RHBDD3-206ENST00000493894 C9orf131Q5VYM1 1079 aa31.36■■■□□ 2.61
RHBDD3-206ENST00000493894 C2CD5Q86YS7 1000 aa31.36■■■□□ 2.61
RHBDD3-206ENST00000493894 LAMB4A4D0S4 1761 aa31.35■■■□□ 2.61
RHBDD3-206ENST00000493894 PIP4K2AP48426 406 aaPredicted RBP31.35■■■□□ 2.61
RHBDD3-206ENST00000493894 NFE2L2Q16236 605 aa31.35■■■□□ 2.61
RHBDD3-206ENST00000493894 ANKRD31Q8N7Z5 1873 aa31.34■■■□□ 2.61
RHBDD3-206ENST00000493894 H0YIN7 160 aa31.34■■■□□ 2.61
RHBDD3-206ENST00000493894 PNISRQ8TF01 805 aaKnown RBP31.34■■■□□ 2.61
RHBDD3-206ENST00000493894 KDM3BQ7LBC6 1761 aa31.34■■■□□ 2.61
RHBDD3-206ENST00000493894 SETDB2Q96T68 719 aa31.33■■■□□ 2.61
RHBDD3-206ENST00000493894 KIF3CO14782 793 aa31.32■■■□□ 2.6
RHBDD3-206ENST00000493894 PRR5LQ6MZQ0 368 aa31.32■■■□□ 2.6
RHBDD3-206ENST00000493894 TTLL6Q8N841 843 aa31.32■■■□□ 2.6
RHBDD3-206ENST00000493894 NPHP1O15259 732 aa31.31■■■□□ 2.6
RHBDD3-206ENST00000493894 CNBD1Q8NA66 436 aa31.31■■■□□ 2.6
RHBDD3-206ENST00000493894 BRIP1Q9BX63 1249 aa31.31■■■□□ 2.6
RHBDD3-206ENST00000493894 MIS18AQ9NYP9 233 aa31.31■■■□□ 2.6
RHBDD3-206ENST00000493894 RNF181Q9P0P0 153 aa31.31■■■□□ 2.6
RHBDD3-206ENST00000493894 PDZRN3Q9UPQ7 1066 aa31.31■■■□□ 2.6
RHBDD3-206ENST00000493894 PDE6BP35913 854 aa31.3■■■□□ 2.6
RHBDD3-206ENST00000493894 ZNF652Q9Y2D9 606 aa31.3■■■□□ 2.6
RHBDD3-206ENST00000493894 COL11A2P13942 1736 aaPredicted RBP31.29■■■□□ 2.6
RHBDD3-206ENST00000493894 DDX10Q13206 875 aaKnown RBP31.28■■■□□ 2.6
RHBDD3-206ENST00000493894 NBPF26B4DH59 902 aa31.27■■■□□ 2.6
RHBDD3-206ENST00000493894 ST5P78524 1137 aa31.27■■■□□ 2.6
RHBDD3-206ENST00000493894 NBPF10Q6P3W6 841 aaKnown RBP31.27■■■□□ 2.6
RHBDD3-206ENST00000493894 CLEC4GQ6UXB4 293 aa31.27■■■□□ 2.6
RHBDD3-206ENST00000493894 NBPF15Q8N660 670 aa31.27■■■□□ 2.6
RHBDD3-206ENST00000493894 SBF1O95248 1867 aa31.27■■■□□ 2.6
RHBDD3-206ENST00000493894 RASSF7Q02833 373 aa31.26■■■□□ 2.59
RHBDD3-206ENST00000493894 CCDC24Q8N4L8 307 aa31.26■■■□□ 2.59
RHBDD3-206ENST00000493894 THUMPD2Q9BTF0 503 aaKnown RBP31.26■■■□□ 2.59
RHBDD3-206ENST00000493894 MYBBP1AQ9BQG0 1328 aaKnown RBP31.24■■■□□ 2.59
RHBDD3-206ENST00000493894 RGL2O15211 777 aa31.24■■■□□ 2.59
RHBDD3-206ENST00000493894 ZNF622Q969S3 477 aaKnown RBP eCLIP31.24■■■□□ 2.59
RHBDD3-206ENST00000493894 NMRK2Q9NPI5 230 aa31.24■■■□□ 2.59
RHBDD3-206ENST00000493894 KDM2BQ8NHM5 1336 aa31.23■■■□□ 2.59
RHBDD3-206ENST00000493894 HSPA6P17066 643 aa31.22■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms