RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 CHADLQ6NUI6 762 aa19.2■□□□□ 0.66
ATG4B-222ENST00000491867 TIAM2Q8IVF5 1701 aa19.2■□□□□ 0.66
ATG4B-222ENST00000491867 CTCFP49711 727 aaPredicted RBP19.19■□□□□ 0.66
ATG4B-222ENST00000491867 MTHFSP49914 203 aa19.19■□□□□ 0.66
ATG4B-222ENST00000491867 C2CD5Q86YS7 1000 aa19.19■□□□□ 0.66
ATG4B-222ENST00000491867 NFATC2IPQ8NCF5 419 aa19.19■□□□□ 0.66
ATG4B-222ENST00000491867 CNTNAP1P78357 1384 aa19.19■□□□□ 0.66
ATG4B-222ENST00000491867 CDCA8Q53HL2 280 aa19.18■□□□□ 0.66
ATG4B-222ENST00000491867 AIDAQ96BJ3 306 aa19.18■□□□□ 0.66
ATG4B-222ENST00000491867 POTEIP0CG38 1075 aa19.17■□□□□ 0.66
ATG4B-222ENST00000491867 POTEJP0CG39 1038 aa19.17■□□□□ 0.66
ATG4B-222ENST00000491867 H0YIN7 160 aa19.16■□□□□ 0.66
ATG4B-222ENST00000491867 SERPINB2P05120 415 aa19.16■□□□□ 0.66
ATG4B-222ENST00000491867 TNNT2P45379 298 aaPredicted RBP19.16■□□□□ 0.66
ATG4B-222ENST00000491867 FAM161AQ3B820 660 aa19.16■□□□□ 0.66
ATG4B-222ENST00000491867 ERFEQ4G0M1 354 aa19.16■□□□□ 0.66
ATG4B-222ENST00000491867 ADAMTS7Q9UKP4 1686 aa19.16■□□□□ 0.66
ATG4B-222ENST00000491867 SOS1Q07889 1333 aaPredicted RBP19.16■□□□□ 0.66
ATG4B-222ENST00000491867 AFDNP55196 1824 aaKnown RBP19.16■□□□□ 0.66
ATG4B-222ENST00000491867 TJP1Q07157 1748 aa19.15■□□□□ 0.66
ATG4B-222ENST00000491867 AMOTQ4VCS5 1084 aa19.15■□□□□ 0.66
ATG4B-222ENST00000491867 C1orf141Q5JVX7 400 aa19.15■□□□□ 0.66
ATG4B-222ENST00000491867 DNAJC10Q8IXB1 793 aa19.15■□□□□ 0.66
ATG4B-222ENST00000491867 VEGFBP49765 207 aa19.14■□□□□ 0.65
ATG4B-222ENST00000491867 LBX1P52954 281 aa19.14■□□□□ 0.65
ATG4B-222ENST00000491867 ZNF219Q9P2Y4 722 aaPredicted RBP19.14■□□□□ 0.65
ATG4B-222ENST00000491867 NARFQ9UHQ1 456 aa19.14■□□□□ 0.65
ATG4B-222ENST00000491867 DLEC1Q9Y238 1755 aa19.13■□□□□ 0.65
ATG4B-222ENST00000491867 CARMIL3Q8ND23 1372 aa19.12■□□□□ 0.65
ATG4B-222ENST00000491867 C21orf2O43822 256 aa19.12■□□□□ 0.65
ATG4B-222ENST00000491867 DDNO94850 711 aaPredicted RBP19.12■□□□□ 0.65
ATG4B-222ENST00000491867 ABHD8Q96I13 439 aa19.12■□□□□ 0.65
ATG4B-222ENST00000491867 BCL2L12Q9HB09 334 aa19.12■□□□□ 0.65
ATG4B-222ENST00000491867 NRXN2Q9P2S2 1712 aa19.11■□□□□ 0.65
ATG4B-222ENST00000491867 PASKQ96RG2 1323 aa19.11■□□□□ 0.65
ATG4B-222ENST00000491867 CYP19A1P11511 503 aaPredicted RBP19.11■□□□□ 0.65
ATG4B-222ENST00000491867 ZNF622Q969S3 477 aaKnown RBP eCLIP19.11■□□□□ 0.656e-7■■■□□ 14.6
ATG4B-222ENST00000491867 WBP1LQ9NX94 342 aa19.11■□□□□ 0.65
ATG4B-222ENST00000491867 COL15A1P39059 1388 aa19.1■□□□□ 0.65
ATG4B-222ENST00000491867 AEBP1Q8IUX7 1158 aa19.1■□□□□ 0.65
ATG4B-222ENST00000491867 BICDL1Q6ZP65 573 aa19.09■□□□□ 0.65
ATG4B-222ENST00000491867 PCDH10Q9P2E7 1040 aa19.09■□□□□ 0.65
ATG4B-222ENST00000491867 DICER1Q9UPY3 1922 aaKnown RBP19.08■□□□□ 0.65
ATG4B-222ENST00000491867 TMEM88BA6NKF7 163 aa19.08■□□□□ 0.64
ATG4B-222ENST00000491867 LDHDQ86WU2 507 aa19.08■□□□□ 0.64
ATG4B-222ENST00000491867 ZBTB1Q9Y2K1 713 aa19.08■□□□□ 0.64
ATG4B-222ENST00000491867 TAOK3Q9H2K8 898 aa19.07■□□□□ 0.64
ATG4B-222ENST00000491867 LTBP3Q9NS15 1303 aa19.06■□□□□ 0.64
ATG4B-222ENST00000491867 IQCA1LA6NCM1 817 aa19.06■□□□□ 0.64
ATG4B-222ENST00000491867 HSPA8P11142 646 aaKnown RBP19.06■□□□□ 0.64
ATG4B-222ENST00000491867 TAF1DQ9H5J8 278 aaPredicted RBP19.06■□□□□ 0.64
ATG4B-222ENST00000491867 FER1L6Q2WGJ9 1857 aa19.05■□□□□ 0.64
ATG4B-222ENST00000491867 ITGBL1O95965 494 aaPredicted RBP19.05■□□□□ 0.64
ATG4B-222ENST00000491867 SLC39A6Q13433 755 aa19.05■□□□□ 0.64
ATG4B-222ENST00000491867 BRIP1Q9BX63 1249 aa19.05■□□□□ 0.64
ATG4B-222ENST00000491867 PDE4DIPQ5VU43 2346 aa19.05■□□□□ 0.64
ATG4B-222ENST00000491867 PDE6BP35913 854 aa19.04■□□□□ 0.64
ATG4B-222ENST00000491867 CCDC24Q8N4L8 307 aa19.04■□□□□ 0.64
ATG4B-222ENST00000491867 SLC52A2Q9HAB3 445 aa19.04■□□□□ 0.64
ATG4B-222ENST00000491867 PDZRN3Q9UPQ7 1066 aa19.04■□□□□ 0.64
ATG4B-222ENST00000491867 CANXP27824 592 aaKnown RBP19.03■□□□□ 0.64
ATG4B-222ENST00000491867 MLLT1Q03111 559 aaPredicted RBP19.03■□□□□ 0.64
ATG4B-222ENST00000491867 EAPPQ56P03 285 aaPredicted RBP19.03■□□□□ 0.64
ATG4B-222ENST00000491867 SULT6B1Q6IMI4 303 aa19.03■□□□□ 0.64
ATG4B-222ENST00000491867 L3MBTL3Q96JM7 780 aaPredicted RBP19.03■□□□□ 0.64
ATG4B-222ENST00000491867 TBC1D9BQ66K14 1250 aa19.02■□□□□ 0.64
ATG4B-222ENST00000491867 LGR6Q9HBX8 967 aa19.02■□□□□ 0.64
ATG4B-222ENST00000491867 VIRMAQ69YN4 1812 aaKnown RBP19.02■□□□□ 0.63
ATG4B-222ENST00000491867 ANKRD31Q8N7Z5 1873 aa19.01■□□□□ 0.63
ATG4B-222ENST00000491867 CCDC85CA6NKD9 419 aa19.01■□□□□ 0.63
ATG4B-222ENST00000491867 SCN11AQ9UI33 1791 aa19.01■□□□□ 0.63
ATG4B-222ENST00000491867 RASSF10A6NK89 507 aa19■□□□□ 0.63
ATG4B-222ENST00000491867 MAP2K1Q02750 393 aaPredicted RBP19■□□□□ 0.63
ATG4B-222ENST00000491867 DEFB115Q30KQ5 88 aa19■□□□□ 0.63
ATG4B-222ENST00000491867 AKAP4Q5JQC9 854 aa19■□□□□ 0.63
ATG4B-222ENST00000491867 PRR5LQ6MZQ0 368 aa19■□□□□ 0.63
ATG4B-222ENST00000491867 CLEC11AQ9Y240 323 aa19■□□□□ 0.63
ATG4B-222ENST00000491867 RGS19P49795 217 aa18.99■□□□□ 0.63
ATG4B-222ENST00000491867 EIF5P55010 431 aaKnown RBP18.99■□□□□ 0.63
ATG4B-222ENST00000491867 PRPF40BQ6NWY9 871 aaKnown RBP18.99■□□□□ 0.63
ATG4B-222ENST00000491867 CNKSR1Q969H4 720 aa18.99■□□□□ 0.63
ATG4B-222ENST00000491867 COL11A2P13942 1736 aaPredicted RBP18.99■□□□□ 0.63
ATG4B-222ENST00000491867 WDR33Q9C0J8 1336 aaKnown RBP18.99■□□□□ 0.63
ATG4B-222ENST00000491867 SCN4AP35499 1836 aa18.98■□□□□ 0.63
ATG4B-222ENST00000491867 SLX4Q8IY92 1834 aa18.98■□□□□ 0.63
ATG4B-222ENST00000491867 SOGA3Q5TF21 947 aa18.98■□□□□ 0.63
ATG4B-222ENST00000491867 A0A087WZG4 1122 aa18.97■□□□□ 0.63
ATG4B-222ENST00000491867 STYK1Q6J9G0 422 aa18.97■□□□□ 0.63
ATG4B-222ENST00000491867 VSIG10Q8N0Z9 540 aa18.97■□□□□ 0.63
ATG4B-222ENST00000491867 POLR3GLQ9BT43 218 aa18.97■□□□□ 0.63
ATG4B-222ENST00000491867 HACL1Q9UJ83 578 aa18.97■□□□□ 0.63
ATG4B-222ENST00000491867 RNMTO43148 476 aaKnown RBP18.96■□□□□ 0.63
ATG4B-222ENST00000491867 STARD3NLO95772 234 aa18.96■□□□□ 0.63
ATG4B-222ENST00000491867 MAP1SQ66K74 1059 aaPredicted RBP18.96■□□□□ 0.63
ATG4B-222ENST00000491867 CNTROBQ8N137 903 aa18.96■□□□□ 0.63
ATG4B-222ENST00000491867 ABT1Q9ULW3 272 aaKnown RBP18.96■□□□□ 0.63
ATG4B-222ENST00000491867 ZNF541Q9H0D2 1346 aa18.96■□□□□ 0.63
ATG4B-222ENST00000491867 NPHP1O15259 732 aa18.95■□□□□ 0.62
ATG4B-222ENST00000491867 SRGNP10124 158 aa18.95■□□□□ 0.62
ATG4B-222ENST00000491867 EPHX2P34913 555 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms