RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 LTN1O94822 1766 aa12.82□□□□□ -0.36
SRRM1-217ENST00000490543 ARHGAP33O14559 1287 aa12.82□□□□□ -0.36
SRRM1-217ENST00000490543 TMC1Q8TDI8 760 aa12.82□□□□□ -0.36
SRRM1-217ENST00000490543 LTV1Q96GA3 475 aaPredicted RBP12.82□□□□□ -0.36
SRRM1-217ENST00000490543 ZNF454Q8N9F8 522 aa12.81□□□□□ -0.36
SRRM1-217ENST00000490543 COL24A1Q17RW2 1714 aa12.81□□□□□ -0.36
SRRM1-217ENST00000490543 SHANK3Q9BYB0 1731 aa12.81□□□□□ -0.36
SRRM1-217ENST00000490543 CEP350Q5VT06 3117 aa12.81□□□□□ -0.36
SRRM1-217ENST00000490543 FBLN1P23142 703 aa12.8□□□□□ -0.36
SRRM1-217ENST00000490543 NEUROD1Q13562 356 aa12.8□□□□□ -0.36
SRRM1-217ENST00000490543 COL23A1Q86Y22 540 aaPredicted RBP12.8□□□□□ -0.36
SRRM1-217ENST00000490543 IP6K1Q92551 441 aa12.8□□□□□ -0.36
SRRM1-217ENST00000490543 TUBGCP6Q96RT7 1819 aa12.8□□□□□ -0.36
SRRM1-217ENST00000490543 NSD2O96028 1365 aa12.8□□□□□ -0.36
SRRM1-217ENST00000490543 USP54Q70EL1 1684 aa12.8□□□□□ -0.36
SRRM1-217ENST00000490543 QSER1Q2KHR3 1735 aa12.79□□□□□ -0.36
SRRM1-217ENST00000490543 FOSBP53539 338 aa12.79□□□□□ -0.36
SRRM1-217ENST00000490543 GRIN3BO60391 1043 aa12.78□□□□□ -0.36
SRRM1-217ENST00000490543 PSEN2P49810 448 aa12.78□□□□□ -0.36
SRRM1-217ENST00000490543 MSL1Q68DK7 614 aa12.78□□□□□ -0.36
SRRM1-217ENST00000490543 HDGFL2Q7Z4V5 671 aaPredicted RBP12.78□□□□□ -0.36
SRRM1-217ENST00000490543 CCNL1Q9UK58 526 aaPredicted RBP12.78□□□□□ -0.36
SRRM1-217ENST00000490543 ANKRD36BQ8N2N9 1353 aa12.78□□□□□ -0.36
SRRM1-217ENST00000490543 DMRTA1Q5VZB9 504 aa12.76□□□□□ -0.37
SRRM1-217ENST00000490543 ZCRB1Q8TBF4 217 aaKnown RBP12.76□□□□□ -0.37
SRRM1-217ENST00000490543 A0A1W2PP64 1363 aa12.76□□□□□ -0.37
SRRM1-217ENST00000490543 EDC4Q6P2E9 1401 aaKnown RBP12.76□□□□□ -0.37
SRRM1-217ENST00000490543 ATP10DQ9P241 1426 aa12.76□□□□□ -0.37
SRRM1-217ENST00000490543 DPYSL4O14531 572 aa12.75□□□□□ -0.37
SRRM1-217ENST00000490543 LY75O60449 1722 aa12.75□□□□□ -0.37
SRRM1-217ENST00000490543 HOXC9P31274 260 aa12.75□□□□□ -0.37
SRRM1-217ENST00000490543 MAP3K19Q56UN5 1328 aa12.75□□□□□ -0.37
SRRM1-217ENST00000490543 TERF2IPQ9NYB0 399 aa12.75□□□□□ -0.37
SRRM1-217ENST00000490543 DOT1LQ8TEK3 1739 aa12.74□□□□□ -0.37
SRRM1-217ENST00000490543 MEGF6O75095 1541 aa12.74□□□□□ -0.37
SRRM1-217ENST00000490543 RNF166Q96A37 237 aaPredicted RBP12.74□□□□□ -0.37
SRRM1-217ENST00000490543 KCNK17Q96T54 332 aa12.74□□□□□ -0.37
SRRM1-217ENST00000490543 CARD11Q9BXL7 1154 aa12.74□□□□□ -0.37
SRRM1-217ENST00000490543 AMPHP49418 695 aa12.73□□□□□ -0.37
SRRM1-217ENST00000490543 NBPF6Q5VWK0 638 aa12.73□□□□□ -0.37
SRRM1-217ENST00000490543 NBPF4Q96M43 638 aa12.73□□□□□ -0.37
SRRM1-217ENST00000490543 BCL2L12Q9HB09 334 aa12.73□□□□□ -0.37
SRRM1-217ENST00000490543 RGPD2P0DJD1 1756 aa12.73□□□□□ -0.37
SRRM1-217ENST00000490543 USP47Q96K76 1375 aa12.72□□□□□ -0.37
SRRM1-217ENST00000490543 ADGRD1Q6QNK2 874 aa12.72□□□□□ -0.37
SRRM1-217ENST00000490543 USHBP1Q8N6Y0 703 aa12.72□□□□□ -0.37
SRRM1-217ENST00000490543 ZNF526Q8TF50 670 aaPredicted RBP12.72□□□□□ -0.37
SRRM1-217ENST00000490543 GPBP1L1Q9HC44 474 aaPredicted RBP12.72□□□□□ -0.37
SRRM1-217ENST00000490543 WWC3Q9ULE0 1092 aa12.72□□□□□ -0.37
SRRM1-217ENST00000490543 CD2APQ9Y5K6 639 aa12.72□□□□□ -0.37
SRRM1-217ENST00000490543 FAM208AQ9UK61 1670 aaKnown RBP12.72□□□□□ -0.37
SRRM1-217ENST00000490543 SMIM5Q71RC9 77 aa12.71□□□□□ -0.37
SRRM1-217ENST00000490543 AMIGO3Q86WK7 504 aa12.71□□□□□ -0.37
SRRM1-217ENST00000490543 COG3Q96JB2 828 aa12.71□□□□□ -0.37
SRRM1-217ENST00000490543 HSPA6P17066 643 aa12.7□□□□□ -0.38
SRRM1-217ENST00000490543 RRS1Q15050 365 aaKnown RBP12.7□□□□□ -0.38
SRRM1-217ENST00000490543 ZDHHC16Q969W1 377 aa12.7□□□□□ -0.38
SRRM1-217ENST00000490543 WDR70Q9NW82 654 aa12.7□□□□□ -0.38
SRRM1-217ENST00000490543 TK2O00142 265 aa12.69□□□□□ -0.38
SRRM1-217ENST00000490543 E2F4Q16254 413 aa12.69□□□□□ -0.38
SRRM1-217ENST00000490543 ADAM33Q9BZ11 813 aa12.69□□□□□ -0.38
SRRM1-217ENST00000490543 TSHZ2Q9NRE2 1034 aa12.69□□□□□ -0.38
SRRM1-217ENST00000490543 PCDHGA10Q9Y5H3 936 aa12.69□□□□□ -0.38
SRRM1-217ENST00000490543 ADCY9O60503 1353 aa12.69□□□□□ -0.38
SRRM1-217ENST00000490543 MPRIPQ6WCQ1 1025 aa12.68□□□□□ -0.38
SRRM1-217ENST00000490543 PUS7Q96PZ0 661 aaKnown RBP12.68□□□□□ -0.38
SRRM1-217ENST00000490543 RAPGEF4Q8WZA2 1011 aa12.67□□□□□ -0.38
SRRM1-217ENST00000490543 TESK2Q96S53 571 aa12.67□□□□□ -0.38
SRRM1-217ENST00000490543 PALLDQ8WX93 1383 aa12.67□□□□□ -0.38
SRRM1-217ENST00000490543 IGSF1Q8N6C5 1336 aa12.66□□□□□ -0.38
SRRM1-217ENST00000490543 CYP27B1O15528 508 aa12.66□□□□□ -0.38
SRRM1-217ENST00000490543 PTPREP23469 700 aa12.66□□□□□ -0.38
SRRM1-217ENST00000490543 FLAD1Q8NFF5 587 aa12.66□□□□□ -0.38
SRRM1-217ENST00000490543 C5P01031 1676 aa12.66□□□□□ -0.38
SRRM1-217ENST00000490543 CGNL1Q0VF96 1302 aa12.65□□□□□ -0.38
SRRM1-217ENST00000490543 FYB1O15117 783 aa12.65□□□□□ -0.38
SRRM1-217ENST00000490543 PHF14O94880 888 aa12.65□□□□□ -0.38
SRRM1-217ENST00000490543 TATP17735 454 aaPredicted RBP12.65□□□□□ -0.38
SRRM1-217ENST00000490543 HSP90AB2PQ58FF8 381 aa12.65□□□□□ -0.38
SRRM1-217ENST00000490543 GGNBP2Q9H3C7 697 aa12.65□□□□□ -0.38
SRRM1-217ENST00000490543 TAF1LQ8IZX4 1826 aa12.65□□□□□ -0.39
SRRM1-217ENST00000490543 ST20-MTHFSA0A0A6YYL1 179 aa12.64□□□□□ -0.39
SRRM1-217ENST00000490543 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.64□□□□□ -0.39
SRRM1-217ENST00000490543 HRO43593 1189 aa12.64□□□□□ -0.39
SRRM1-217ENST00000490543 AK7Q96M32 723 aa12.64□□□□□ -0.39
SRRM1-217ENST00000490543 PIGBQ92521 554 aa12.63□□□□□ -0.39
SRRM1-217ENST00000490543 RTL1A6NKG5 1358 aa12.63□□□□□ -0.39
SRRM1-217ENST00000490543 PCDH11XQ9BZA7 1347 aa12.62□□□□□ -0.39
SRRM1-217ENST00000490543 PCDH11YQ9BZA8 1340 aa12.62□□□□□ -0.39
SRRM1-217ENST00000490543 TOGARAM1Q9Y4F4 1720 aa12.62□□□□□ -0.39
SRRM1-217ENST00000490543 PDIA6Q15084 440 aa12.62□□□□□ -0.39
SRRM1-217ENST00000490543 TYW1BQ6NUM6 668 aa12.62□□□□□ -0.39
SRRM1-217ENST00000490543 LINC00116Q8NCU8 138 aa12.62□□□□□ -0.39
SRRM1-217ENST00000490543 SMARCC1Q92922 1105 aaPredicted RBP12.62□□□□□ -0.39
SRRM1-217ENST00000490543 C4BP0C0L5 1744 aa12.62□□□□□ -0.39
SRRM1-217ENST00000490543 FBXW7Q969H0 707 aa12.61□□□□□ -0.39
SRRM1-217ENST00000490543 VPS9D1Q9Y2B5 631 aa12.61□□□□□ -0.39
SRRM1-217ENST00000490543 INSRP06213 1382 aa12.6□□□□□ -0.39
SRRM1-217ENST00000490543 UBR3Q6ZT12 1888 aa12.6□□□□□ -0.39
SRRM1-217ENST00000490543 DDX12PQ92771 950 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms