RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 GLMNQ92990 594 aa5.74□□□□□ -1.49
SNRNP40-206ENST00000489853 CALR3Q96L12 384 aaKnown RBP5.74□□□□□ -1.49
SNRNP40-206ENST00000489853 MYCBPQ99417 103 aaPredicted RBP5.74□□□□□ -1.49
SNRNP40-206ENST00000489853 RASSF4Q9H2L5 321 aa5.74□□□□□ -1.49
SNRNP40-206ENST00000489853 BRMS1Q9HCU9 246 aa5.74□□□□□ -1.49
SNRNP40-206ENST00000489853 PLA2G2EQ9NZK7 142 aa5.74□□□□□ -1.49
SNRNP40-206ENST00000489853 PAXBP1Q9Y5B6 917 aa5.74□□□□□ -1.49
SNRNP40-206ENST00000489853 RAD50Q92878 1312 aa5.73□□□□□ -1.49
SNRNP40-206ENST00000489853 LMOD3Q0VAK6 560 aa5.73□□□□□ -1.49
SNRNP40-206ENST00000489853 MVPQ14764 893 aaKnown RBP5.73□□□□□ -1.49
SNRNP40-206ENST00000489853 BMP2KLQ5H9B9 411 aa5.73□□□□□ -1.49
SNRNP40-206ENST00000489853 TYW1BQ6NUM6 668 aa5.73□□□□□ -1.49
SNRNP40-206ENST00000489853 C17orf53Q8N3J3 647 aaPredicted RBP5.73□□□□□ -1.49
SNRNP40-206ENST00000489853 SLC26A8Q96RN1 970 aa5.73□□□□□ -1.49
SNRNP40-206ENST00000489853 NCAPGQ9BPX3 1015 aa5.73□□□□□ -1.49
SNRNP40-206ENST00000489853 HCSTQ9UBK5 93 aa5.73□□□□□ -1.49
SNRNP40-206ENST00000489853 RSPH14Q9UHP6 348 aa5.73□□□□□ -1.49
SNRNP40-206ENST00000489853 ABCC2Q92887 1545 aa5.73□□□□□ -1.49
SNRNP40-206ENST00000489853 ERICH4A6NGS2 130 aa5.72□□□□□ -1.49
SNRNP40-206ENST00000489853 GOLGA6L6A8MZA4 724 aa5.72□□□□□ -1.49
SNRNP40-206ENST00000489853 C3orf80F5H4A9 247 aa5.72□□□□□ -1.49
SNRNP40-206ENST00000489853 DHX16O60231 1041 aaKnown RBP5.72□□□□□ -1.49
SNRNP40-206ENST00000489853 OATP04181 439 aa5.72□□□□□ -1.49
SNRNP40-206ENST00000489853 NUCB1Q02818 461 aa5.72□□□□□ -1.49
SNRNP40-206ENST00000489853 MUM1L1Q5H9M0 696 aa5.72□□□□□ -1.49
SNRNP40-206ENST00000489853 C6orf132Q5T0Z8 1188 aa5.72□□□□□ -1.49
SNRNP40-206ENST00000489853 TMCO4Q5TGY1 634 aa5.72□□□□□ -1.49
SNRNP40-206ENST00000489853 ICE2Q659A1 982 aa5.72□□□□□ -1.49
SNRNP40-206ENST00000489853 RIC3Q7Z5B4 369 aa5.72□□□□□ -1.49
SNRNP40-206ENST00000489853 BANK1Q8NDB2 785 aa5.72□□□□□ -1.49
SNRNP40-206ENST00000489853 NOL10Q9BSC4 688 aaKnown RBP5.72□□□□□ -1.49
SNRNP40-206ENST00000489853 SMC4Q9NTJ3 1288 aa5.72□□□□□ -1.49
SNRNP40-206ENST00000489853 KNSTRNQ9Y448 316 aa5.72□□□□□ -1.49
SNRNP40-206ENST00000489853 PIK3C2GO75747 1445 aa5.72□□□□□ -1.49
SNRNP40-206ENST00000489853 DAPK1P53355 1430 aa5.72□□□□□ -1.49
SNRNP40-206ENST00000489853 PPRC1Q5VV67 1664 aaKnown RBP5.72□□□□□ -1.49
SNRNP40-206ENST00000489853 MOXD2PA6NHM9 499 aa5.72□□□□□ -1.49
SNRNP40-206ENST00000489853 TK2O00142 265 aa5.72□□□□□ -1.49
SNRNP40-206ENST00000489853 KDM4AO75164 1064 aa5.72□□□□□ -1.49
SNRNP40-206ENST00000489853 HSP90B1P14625 803 aaKnown RBP5.72□□□□□ -1.49
SNRNP40-206ENST00000489853 NDUFV2P19404 249 aa5.72□□□□□ -1.49
SNRNP40-206ENST00000489853 RFX1P22670 979 aa5.72□□□□□ -1.49
SNRNP40-206ENST00000489853 GUCY2CP25092 1073 aa5.72□□□□□ -1.49
SNRNP40-206ENST00000489853 TMF1P82094 1093 aa5.72□□□□□ -1.49
SNRNP40-206ENST00000489853 RAD51AP2Q09MP3 1159 aa5.72□□□□□ -1.49
SNRNP40-206ENST00000489853 WWC1Q8IX03 1113 aa5.72□□□□□ -1.49
SNRNP40-206ENST00000489853 CEP120Q8N960 986 aa5.72□□□□□ -1.49
SNRNP40-206ENST00000489853 ADAMTS19Q8TE59 1207 aa5.72□□□□□ -1.49
SNRNP40-206ENST00000489853 KIF1BPQ96EK5 621 aa5.72□□□□□ -1.49
SNRNP40-206ENST00000489853 TESK2Q96S53 571 aa5.72□□□□□ -1.49
SNRNP40-206ENST00000489853 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.72□□□□□ -1.49
SNRNP40-206ENST00000489853 FAM198AQ9UFP1 575 aa5.72□□□□□ -1.49
SNRNP40-206ENST00000489853 KCNG1Q9UIX4 513 aa5.72□□□□□ -1.49
SNRNP40-206ENST00000489853 UHRF1BP1LA0JNW5 1464 aa5.71□□□□□ -1.49
SNRNP40-206ENST00000489853 ANKRD36BQ8N2N9 1353 aa5.71□□□□□ -1.5
SNRNP40-206ENST00000489853 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.71□□□□□ -1.5
SNRNP40-206ENST00000489853 CASQ1P31415 396 aa5.71□□□□□ -1.5
SNRNP40-206ENST00000489853 BMS1Q14692 1282 aaKnown RBP5.71□□□□□ -1.5
SNRNP40-206ENST00000489853 SLFNL1Q499Z3 407 aa5.71□□□□□ -1.5
SNRNP40-206ENST00000489853 CCDC146Q8IYE0 955 aa5.71□□□□□ -1.5
SNRNP40-206ENST00000489853 DZIP1LQ8IYY4 767 aaKnown RBP5.71□□□□□ -1.5
SNRNP40-206ENST00000489853 TXLNBQ8N3L3 684 aa5.71□□□□□ -1.5
SNRNP40-206ENST00000489853 CCDC112Q8NEF3 446 aa5.71□□□□□ -1.5
SNRNP40-206ENST00000489853 USP25Q9UHP3 1055 aa5.71□□□□□ -1.5
SNRNP40-206ENST00000489853 NSFL1CQ9UNZ2 370 aaKnown RBP5.71□□□□□ -1.5
SNRNP40-206ENST00000489853 ZDHHC9Q9Y397 364 aa5.71□□□□□ -1.5
SNRNP40-206ENST00000489853 ABCC5O15440 1437 aa5.71□□□□□ -1.5
SNRNP40-206ENST00000489853 YEATS2Q9ULM3 1422 aa5.71□□□□□ -1.5
SNRNP40-206ENST00000489853 TSPOAP1O95153 1857 aa5.71□□□□□ -1.5
SNRNP40-206ENST00000489853 GPRASP1Q5JY77 1395 aa5.71□□□□□ -1.5
SNRNP40-206ENST00000489853 AP1G2O75843 785 aa5.7□□□□□ -1.5
SNRNP40-206ENST00000489853 TEX35Q5T0J7 233 aa5.7□□□□□ -1.5
SNRNP40-206ENST00000489853 RNF20Q5VTR2 975 aa5.7□□□□□ -1.5
SNRNP40-206ENST00000489853 ZKSCAN2Q63HK3 967 aa5.7□□□□□ -1.5
SNRNP40-206ENST00000489853 PPP2R2DQ66LE6 453 aa5.7□□□□□ -1.5
SNRNP40-206ENST00000489853 WDR63Q8IWG1 891 aa5.7□□□□□ -1.5
SNRNP40-206ENST00000489853 MPNDQ8N594 471 aa5.7□□□□□ -1.5
SNRNP40-206ENST00000489853 CABLES1Q8TDN4 633 aa5.7□□□□□ -1.5
SNRNP40-206ENST00000489853 ZBTB9Q96C00 473 aa5.7□□□□□ -1.5
SNRNP40-206ENST00000489853 CHMP4CQ96CF2 233 aa5.7□□□□□ -1.5
SNRNP40-206ENST00000489853 SIRT1Q96EB6 747 aa5.7□□□□□ -1.5
SNRNP40-206ENST00000489853 TRERF1Q96PN7 1200 aa5.7□□□□□ -1.5
SNRNP40-206ENST00000489853 CARD10Q9BWT7 1032 aa5.7□□□□□ -1.5
SNRNP40-206ENST00000489853 ADAM33Q9BZ11 813 aa5.7□□□□□ -1.5
SNRNP40-206ENST00000489853 PYCARDQ9ULZ3 195 aa5.7□□□□□ -1.5
SNRNP40-206ENST00000489853 DDX19BQ9UMR2 479 aa5.7□□□□□ -1.5
SNRNP40-206ENST00000489853 CEP83Q9Y592 693 aa5.7□□□□□ -1.5
SNRNP40-206ENST00000489853 CT47B1P0C2W7 299 aaPredicted RBP5.7□□□□□ -1.5
SNRNP40-206ENST00000489853 KMT5BQ4FZB7 885 aa5.7□□□□□ -1.5
SNRNP40-206ENST00000489853 CNPY4Q8N129 248 aa5.7□□□□□ -1.5
SNRNP40-206ENST00000489853 TTC13Q8NBP0 860 aa5.7□□□□□ -1.5
SNRNP40-206ENST00000489853 CWC15Q9P013 229 aaKnown RBP5.7□□□□□ -1.5
SNRNP40-206ENST00000489853 KANK1Q14678 1352 aa5.69□□□□□ -1.5
SNRNP40-206ENST00000489853 FAM135AQ9P2D6 1515 aa5.69□□□□□ -1.5
SNRNP40-206ENST00000489853 ADGRL1O94910 1474 aa5.69□□□□□ -1.5
SNRNP40-206ENST00000489853 RGS20O76081 388 aa5.69□□□□□ -1.5
SNRNP40-206ENST00000489853 CCDC172P0C7W6 258 aa5.69□□□□□ -1.5
SNRNP40-206ENST00000489853 FOSBP53539 338 aa5.69□□□□□ -1.5
SNRNP40-206ENST00000489853 RBM6P78332 1123 aaKnown RBP5.69□□□□□ -1.5
SNRNP40-206ENST00000489853 PKP1Q13835 747 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms