RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 LRRC37A3O60309 1634 aa23.57■■□□□ 1.36
HMG20B-213ENST00000488973 MTERF4Q7Z6M4 381 aaKnown RBP23.57■■□□□ 1.36
HMG20B-213ENST00000488973 IPO4Q8TEX9 1081 aaKnown RBP23.57■■□□□ 1.36
HMG20B-213ENST00000488973 KDRP35968 1356 aa23.56■■□□□ 1.36
HMG20B-213ENST00000488973 FOXO3O43524 673 aa23.56■■□□□ 1.36
HMG20B-213ENST00000488973 FLIIQ13045 1269 aa23.56■■□□□ 1.36
HMG20B-213ENST00000488973 FAM13BQ9NYF5 915 aa23.56■■□□□ 1.36
HMG20B-213ENST00000488973 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.56■■□□□ 1.36
HMG20B-213ENST00000488973 NOL8Q76FK4 1167 aaKnown RBP23.55■■□□□ 1.36
HMG20B-213ENST00000488973 TMEM87AQ8NBN3 555 aa23.55■■□□□ 1.36
HMG20B-213ENST00000488973 PTMAP06454 111 aaKnown RBP23.55■■□□□ 1.36
HMG20B-213ENST00000488973 HSPA4P34932 840 aa23.55■■□□□ 1.36
HMG20B-213ENST00000488973 CCDC30Q5VVM6 783 aa23.55■■□□□ 1.36
HMG20B-213ENST00000488973 USP48Q86UV5 1035 aa23.55■■□□□ 1.36
HMG20B-213ENST00000488973 DIP2AQ14689 1571 aa23.55■■□□□ 1.36
HMG20B-213ENST00000488973 KIAA2012Q0VF49 1180 aa23.54■■□□□ 1.36
HMG20B-213ENST00000488973 PXDNLA1KZ92 1463 aa23.54■■□□□ 1.36
HMG20B-213ENST00000488973 PTPRUQ92729 1446 aa23.54■■□□□ 1.36
HMG20B-213ENST00000488973 GADD45BO75293 160 aaPredicted RBP23.54■■□□□ 1.36
HMG20B-213ENST00000488973 FKBP5Q13451 457 aaPredicted RBP23.54■■□□□ 1.36
HMG20B-213ENST00000488973 UPF3BQ9BZI7 483 aaKnown RBP23.54■■□□□ 1.36
HMG20B-213ENST00000488973 HTATSF1O43719 755 aaKnown RBP23.53■■□□□ 1.36
HMG20B-213ENST00000488973 PLPPR3Q6T4P5 718 aa23.53■■□□□ 1.36
HMG20B-213ENST00000488973 UNC5CLQ8IV45 518 aa23.53■■□□□ 1.36
HMG20B-213ENST00000488973 SOS1Q07889 1333 aaPredicted RBP23.53■■□□□ 1.36
HMG20B-213ENST00000488973 SLC26A8Q96RN1 970 aa23.52■■□□□ 1.36
HMG20B-213ENST00000488973 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.52■■□□□ 1.36
HMG20B-213ENST00000488973 CEP170BQ9Y4F5 1589 aaPredicted RBP23.51■■□□□ 1.35
HMG20B-213ENST00000488973 SBNO1A3KN83 1393 aa23.51■■□□□ 1.35
HMG20B-213ENST00000488973 FLT4P35916 1363 aa23.51■■□□□ 1.35
HMG20B-213ENST00000488973 RPAP1Q9BWH6 1393 aaPredicted RBP23.51■■□□□ 1.35
HMG20B-213ENST00000488973 LRRFIP2Q9Y608 721 aaKnown RBP23.51■■□□□ 1.35
HMG20B-213ENST00000488973 LETM1O95202 739 aaPredicted RBP23.5■■□□□ 1.35
HMG20B-213ENST00000488973 CCDC183Q5T5S1 534 aa23.5■■□□□ 1.35
HMG20B-213ENST00000488973 GDPD2Q9HCC8 539 aa23.5■■□□□ 1.35
HMG20B-213ENST00000488973 KLHL34Q8N239 644 aa23.5■■□□□ 1.35
HMG20B-213ENST00000488973 RAB11FIP3O75154 756 aa23.49■■□□□ 1.35
HMG20B-213ENST00000488973 SSH3Q8TE77 659 aa23.49■■□□□ 1.35
HMG20B-213ENST00000488973 IGSF1Q8N6C5 1336 aa23.49■■□□□ 1.35
HMG20B-213ENST00000488973 ADAMTSL3P82987 1691 aa23.48■■□□□ 1.35
HMG20B-213ENST00000488973 IL25Q9H293 177 aa23.48■■□□□ 1.35
HMG20B-213ENST00000488973 RAD50Q92878 1312 aa23.48■■□□□ 1.35
HMG20B-213ENST00000488973 AMOTL2Q9Y2J4 779 aa23.48■■□□□ 1.35
HMG20B-213ENST00000488973 TTC21AQ8NDW8 1320 aa23.48■■□□□ 1.35
HMG20B-213ENST00000488973 FOXD4L6Q3SYB3 417 aaPredicted RBP23.47■■□□□ 1.35
HMG20B-213ENST00000488973 FOXD4L3Q6VB84 417 aaPredicted RBP23.47■■□□□ 1.35
HMG20B-213ENST00000488973 USP44Q9H0E7 712 aa23.47■■□□□ 1.35
HMG20B-213ENST00000488973 UBTFL1P0CB47 393 aaPredicted RBP23.46■■□□□ 1.35
HMG20B-213ENST00000488973 ZSCAN22P10073 491 aaPredicted RBP23.46■■□□□ 1.35
HMG20B-213ENST00000488973 DMTNQ08495 405 aa23.46■■□□□ 1.35
HMG20B-213ENST00000488973 TTC14Q96N46 770 aa23.46■■□□□ 1.35
HMG20B-213ENST00000488973 SGSM2O43147 1006 aa23.45■■□□□ 1.35
HMG20B-213ENST00000488973 PIBF1Q8WXW3 757 aa23.45■■□□□ 1.35
HMG20B-213ENST00000488973 UBE2HP62256 183 aa23.45■■□□□ 1.34
HMG20B-213ENST00000488973 EYA1Q99502 592 aa23.45■■□□□ 1.34
HMG20B-213ENST00000488973 SOX12O15370 315 aa23.44■■□□□ 1.34
HMG20B-213ENST00000488973 IL1RAPL2Q9NP60 686 aa23.44■■□□□ 1.34
HMG20B-213ENST00000488973 BABAM1Q9NWV8 329 aa23.44■■□□□ 1.34
HMG20B-213ENST00000488973 SNX14Q9Y5W7 946 aa23.44■■□□□ 1.34
HMG20B-213ENST00000488973 CRYBG1Q9Y4K1 1723 aa23.44■■□□□ 1.34
HMG20B-213ENST00000488973 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.44■■□□□ 1.34
HMG20B-213ENST00000488973 GNAT3A8MTJ3 354 aa23.43■■□□□ 1.34
HMG20B-213ENST00000488973 MYRIPQ8NFW9 859 aa23.43■■□□□ 1.34
HMG20B-213ENST00000488973 PI4K2BQ8TCG2 481 aa23.43■■□□□ 1.34
HMG20B-213ENST00000488973 CNPY2Q9Y2B0 182 aa23.43■■□□□ 1.34
HMG20B-213ENST00000488973 NUTM1Q86Y26 1132 aa23.43■■□□□ 1.34
HMG20B-213ENST00000488973 PRIMPOLQ96LW4 560 aa23.43■■□□□ 1.34
HMG20B-213ENST00000488973 ATP6V1DQ9Y5K8 247 aa23.43■■□□□ 1.34
HMG20B-213ENST00000488973 STX6O43752 255 aa23.42■■□□□ 1.34
HMG20B-213ENST00000488973 POLA2Q14181 598 aa23.42■■□□□ 1.34
HMG20B-213ENST00000488973 USP25Q9UHP3 1055 aa23.42■■□□□ 1.34
HMG20B-213ENST00000488973 ZHX1Q9UKY1 873 aaPredicted RBP23.42■■□□□ 1.34
HMG20B-213ENST00000488973 LIMCH1Q9UPQ0 1083 aa23.42■■□□□ 1.34
HMG20B-213ENST00000488973 LSG1Q9H089 658 aaKnown RBP23.42■■□□□ 1.34
HMG20B-213ENST00000488973 ADCY5O95622 1261 aa23.41■■□□□ 1.34
HMG20B-213ENST00000488973 ZNF142P52746 1687 aaPredicted RBP23.41■■□□□ 1.34
HMG20B-213ENST00000488973 SYT1P21579 422 aa23.41■■□□□ 1.34
HMG20B-213ENST00000488973 AK2P54819 239 aa23.41■■□□□ 1.34
HMG20B-213ENST00000488973 NECTIN2Q92692 538 aa23.41■■□□□ 1.34
HMG20B-213ENST00000488973 NUTM2FA1L443 756 aa23.4■■□□□ 1.34
HMG20B-213ENST00000488973 SURF6O75683 361 aaKnown RBP23.4■■□□□ 1.34
HMG20B-213ENST00000488973 HMGN5P82970 282 aaKnown RBP23.4■■□□□ 1.34
HMG20B-213ENST00000488973 NOLC1Q14978 699 aaKnown RBP eCLIP23.4■■□□□ 1.34
HMG20B-213ENST00000488973 CNTROBQ8N137 903 aa23.4■■□□□ 1.34
HMG20B-213ENST00000488973 RHPN1Q8TCX5 695 aa23.4■■□□□ 1.34
HMG20B-213ENST00000488973 F13A1P00488 732 aa23.4■■□□□ 1.34
HMG20B-213ENST00000488973 AMPHP49418 695 aa23.4■■□□□ 1.34
HMG20B-213ENST00000488973 DNTTIP2Q5QJE6 756 aaKnown RBP23.4■■□□□ 1.34
HMG20B-213ENST00000488973 PPP1R42Q7Z4L9 355 aa23.4■■□□□ 1.34
HMG20B-213ENST00000488973 RUFY3Q7L099 469 aa23.39■■□□□ 1.34
HMG20B-213ENST00000488973 KIF1BPQ96EK5 621 aa23.39■■□□□ 1.34
HMG20B-213ENST00000488973 HCLS1P14317 486 aaPredicted RBP23.39■■□□□ 1.33
HMG20B-213ENST00000488973 SMC3Q9UQE7 1217 aa23.39■■□□□ 1.33
HMG20B-213ENST00000488973 MAP3K5Q99683 1374 aa23.38■■□□□ 1.33
HMG20B-213ENST00000488973 KDM4AO75164 1064 aa23.38■■□□□ 1.33
HMG20B-213ENST00000488973 TAF7Q15545 349 aaPredicted RBP23.38■■□□□ 1.33
HMG20B-213ENST00000488973 ANKLE2Q86XL3 938 aa23.38■■□□□ 1.33
HMG20B-213ENST00000488973 PIK3C2AO00443 1686 aa23.37■■□□□ 1.33
HMG20B-213ENST00000488973 MAP4K4O95819 1239 aaPredicted RBP23.37■■□□□ 1.33
HMG20B-213ENST00000488973 RASEFQ8IZ41 740 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms