RNA–Protein interactions for RNA: ENST00000484979.5

PCDH17-202, Transcript of protocadherin 17, humanhuman

TSL 1 (best)

Gene PCDH17, Length 4,471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-202ENST00000484979 NKTRP30414 1462 aaKnown RBP18.7■□□□□ 0.58
PCDH17-202ENST00000484979 ZNF213O14771 459 aa18.7■□□□□ 0.58
PCDH17-202ENST00000484979 TNIP1Q15025 636 aa18.7■□□□□ 0.58
PCDH17-202ENST00000484979 PIK3R4Q99570 1358 aa18.7■□□□□ 0.58
PCDH17-202ENST00000484979 TTLL5Q6EMB2 1281 aa18.7■□□□□ 0.58
PCDH17-202ENST00000484979 PRPF40BQ6NWY9 871 aaKnown RBP18.7■□□□□ 0.58
PCDH17-202ENST00000484979 TXLNBQ8N3L3 684 aa18.7■□□□□ 0.58
PCDH17-202ENST00000484979 TANGO6Q9C0B7 1094 aa18.7■□□□□ 0.58
PCDH17-202ENST00000484979 RANBP6O60518 1105 aaKnown RBP18.7■□□□□ 0.58
PCDH17-202ENST00000484979 PIBF1Q8WXW3 757 aa18.7■□□□□ 0.58
PCDH17-202ENST00000484979 PEG3Q9GZU2 1588 aa18.69■□□□□ 0.58
PCDH17-202ENST00000484979 TTF1Q15361 905 aaPredicted RBP18.69■□□□□ 0.58
PCDH17-202ENST00000484979 CEP57L1Q8IYX8 460 aa18.69■□□□□ 0.58
PCDH17-202ENST00000484979 DDX11Q96FC9 970 aa18.69■□□□□ 0.58
PCDH17-202ENST00000484979 ATP5J2-PTCD1G3V325 749 aa18.69■□□□□ 0.58
PCDH17-202ENST00000484979 TRIM27P14373 513 aa18.69■□□□□ 0.58
PCDH17-202ENST00000484979 SMARCA5O60264 1052 aaPredicted RBP18.68■□□□□ 0.58
PCDH17-202ENST00000484979 BAG3O95817 575 aa18.68■□□□□ 0.58
PCDH17-202ENST00000484979 SH2B1Q9NRF2 756 aaPredicted RBP18.68■□□□□ 0.58
PCDH17-202ENST00000484979 KAT6BQ8WYB5 2073 aa18.68■□□□□ 0.58
PCDH17-202ENST00000484979 ZNF518AQ6AHZ1 1483 aa18.68■□□□□ 0.58
PCDH17-202ENST00000484979 DEF6Q9H4E7 631 aa18.68■□□□□ 0.58
PCDH17-202ENST00000484979 DDB1Q16531 1140 aa18.67■□□□□ 0.58
PCDH17-202ENST00000484979 NBPF6Q5VWK0 638 aa18.67■□□□□ 0.58
PCDH17-202ENST00000484979 NBPF5PQ86XG9 351 aaPredicted RBP18.67■□□□□ 0.58
PCDH17-202ENST00000484979 NBPF4Q96M43 638 aa18.67■□□□□ 0.58
PCDH17-202ENST00000484979 SPTY2D1Q68D10 685 aaPredicted RBP18.67■□□□□ 0.58
PCDH17-202ENST00000484979 HMGN5P82970 282 aaKnown RBP18.67■□□□□ 0.58
PCDH17-202ENST00000484979 PUS7Q96PZ0 661 aaKnown RBP18.67■□□□□ 0.58
PCDH17-202ENST00000484979 ERCC4Q92889 916 aaPredicted RBP18.66■□□□□ 0.58
PCDH17-202ENST00000484979 RAB34Q9BZG1 259 aa18.66■□□□□ 0.58
PCDH17-202ENST00000484979 EVI5LQ96CN4 794 aa18.66■□□□□ 0.58
PCDH17-202ENST00000484979 MBIPQ9NS73 344 aa18.66■□□□□ 0.58
PCDH17-202ENST00000484979 ZNF219Q9P2Y4 722 aaPredicted RBP18.66■□□□□ 0.58
PCDH17-202ENST00000484979 NUP62CLQ9H1M0 184 aa18.66■□□□□ 0.58
PCDH17-202ENST00000484979 CBFA2T2O43439 604 aa18.65■□□□□ 0.58
PCDH17-202ENST00000484979 CCDC96Q2M329 555 aa18.65■□□□□ 0.58
PCDH17-202ENST00000484979 NOM1Q5C9Z4 860 aaKnown RBP18.65■□□□□ 0.58
PCDH17-202ENST00000484979 RIMS2Q9UQ26 1411 aa18.65■□□□□ 0.58
PCDH17-202ENST00000484979 CCDC152Q4G0S7 254 aa18.64■□□□□ 0.58
PCDH17-202ENST00000484979 FAM83GA6ND36 823 aa18.64■□□□□ 0.57
PCDH17-202ENST00000484979 IFIT3O14879 490 aaKnown RBP18.64■□□□□ 0.57
PCDH17-202ENST00000484979 UQCRFS1P1P0C7P4 283 aa18.64■□□□□ 0.57
PCDH17-202ENST00000484979 SETQ01105 290 aaPredicted RBP18.64■□□□□ 0.57
PCDH17-202ENST00000484979 TTLL12Q14166 644 aaPredicted RBP18.64■□□□□ 0.57
PCDH17-202ENST00000484979 SLC12A7Q9Y666 1083 aa18.64■□□□□ 0.57
PCDH17-202ENST00000484979 C8orf76Q96K31 380 aa18.64■□□□□ 0.57
PCDH17-202ENST00000484979 NLRP3Q96P20 1036 aa18.64■□□□□ 0.57
PCDH17-202ENST00000484979 SCAND2PQ9GZW5 306 aaPredicted RBP18.64■□□□□ 0.57
PCDH17-202ENST00000484979 FERMT3Q86UX7 667 aa18.64■□□□□ 0.57
PCDH17-202ENST00000484979 ZNF622Q969S3 477 aaKnown RBP eCLIP18.64■□□□□ 0.57
PCDH17-202ENST00000484979 PPP1R12BO60237 982 aaPredicted RBP18.63■□□□□ 0.57
PCDH17-202ENST00000484979 ARHGAP45Q92619 1136 aa18.63■□□□□ 0.57
PCDH17-202ENST00000484979 PHAXQ9H814 394 aaKnown RBP18.63■□□□□ 0.57
PCDH17-202ENST00000484979 ST5P78524 1137 aa18.63■□□□□ 0.57
PCDH17-202ENST00000484979 WDR78Q5VTH9 848 aa18.63■□□□□ 0.57
PCDH17-202ENST00000484979 CCDC83Q8IWF9 413 aa18.63■□□□□ 0.57
PCDH17-202ENST00000484979 AKAP4Q5JQC9 854 aa18.63■□□□□ 0.57
PCDH17-202ENST00000484979 LRRC59Q96AG4 307 aaKnown RBP18.63■□□□□ 0.57
PCDH17-202ENST00000484979 FEZ1Q99689 392 aa18.63■□□□□ 0.57
PCDH17-202ENST00000484979 TBX22Q9Y458 520 aa18.63■□□□□ 0.57
PCDH17-202ENST00000484979 SETDB2Q96T68 719 aa18.63■□□□□ 0.57
PCDH17-202ENST00000484979 CABP5Q9NP86 173 aa18.63■□□□□ 0.57
PCDH17-202ENST00000484979 CUL5Q93034 780 aa18.62■□□□□ 0.57
PCDH17-202ENST00000484979 ANXA1P04083 346 aa18.62■□□□□ 0.57
PCDH17-202ENST00000484979 CATIPQ7Z7H3 387 aa18.62■□□□□ 0.57
PCDH17-202ENST00000484979 GOLIM4O00461 696 aa18.62■□□□□ 0.57
PCDH17-202ENST00000484979 HLA-DOAP06340 250 aa18.62■□□□□ 0.57
PCDH17-202ENST00000484979 THOC2Q8NI27 1593 aaKnown RBP18.62■□□□□ 0.57
PCDH17-202ENST00000484979 WDR7Q9Y4E6 1490 aa18.61■□□□□ 0.57
PCDH17-202ENST00000484979 SNRKQ9NRH2 765 aa18.61■□□□□ 0.57
PCDH17-202ENST00000484979 PDE4BQ07343 736 aa18.61■□□□□ 0.57
PCDH17-202ENST00000484979 COPS6Q7L5N1 327 aa18.61■□□□□ 0.57
PCDH17-202ENST00000484979 C8orf37Q96NL8 207 aa18.61■□□□□ 0.57
PCDH17-202ENST00000484979 ABCC10Q5T3U5 1492 aa18.61■□□□□ 0.57
PCDH17-202ENST00000484979 DUOX2Q9NRD8 1548 aa18.61■□□□□ 0.57
PCDH17-202ENST00000484979 CCDC194A0A1B0GVG4 234 aa18.61■□□□□ 0.57
PCDH17-202ENST00000484979 SMTNL1A8MU46 457 aa18.61■□□□□ 0.57
PCDH17-202ENST00000484979 IL2RBP14784 551 aa18.61■□□□□ 0.57
PCDH17-202ENST00000484979 DESP17661 470 aa18.61■□□□□ 0.57
PCDH17-202ENST00000484979 DISP3Q9P2K9 1392 aa18.61■□□□□ 0.57
PCDH17-202ENST00000484979 ALDH1L1O75891 902 aa18.61■□□□□ 0.57
PCDH17-202ENST00000484979 CCDC82Q8N4S0 544 aa18.61■□□□□ 0.57
PCDH17-202ENST00000484979 XAGE3Q8WTP9 111 aa18.6■□□□□ 0.57
PCDH17-202ENST00000484979 LIMCH1Q9UPQ0 1083 aa18.6■□□□□ 0.57
PCDH17-202ENST00000484979 KIF5BP33176 963 aa18.6■□□□□ 0.57
PCDH17-202ENST00000484979 ANKRD18AQ8IVF6 992 aa18.6■□□□□ 0.57
PCDH17-202ENST00000484979 ATP6V1AP38606 617 aa18.6■□□□□ 0.57
PCDH17-202ENST00000484979 FBLN1P23142 703 aa18.59■□□□□ 0.57
PCDH17-202ENST00000484979 HSPA2P54652 639 aa18.59■□□□□ 0.57
PCDH17-202ENST00000484979 TRIM21P19474 475 aaKnown RBP18.59■□□□□ 0.57
PCDH17-202ENST00000484979 C20orf194Q5TEA3 1177 aa18.59■□□□□ 0.57
PCDH17-202ENST00000484979 CCDC12Q8WUD4 166 aaPredicted RBP18.59■□□□□ 0.57
PCDH17-202ENST00000484979 MYO1BO43795 1136 aa18.59■□□□□ 0.57
PCDH17-202ENST00000484979 GCP02774 474 aa18.59■□□□□ 0.57
PCDH17-202ENST00000484979 MCM4P33991 863 aa18.59■□□□□ 0.57
PCDH17-202ENST00000484979 PPP4R3AQ6IN85 833 aa18.59■□□□□ 0.57
PCDH17-202ENST00000484979 TSPY2A6NKD2 308 aa18.58■□□□□ 0.57
PCDH17-202ENST00000484979 GOLGA8AA7E2F4 631 aa18.58■□□□□ 0.57
PCDH17-202ENST00000484979 GOLGA8BA8MQT2 603 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms