RNA–Protein interactions for RNA: ENST00000482967.5

CDK5RAP1-213, Transcript of CDK5 regulatory subunit associated protein 1, human

TSL 3

Gene CDK5RAP1, Length 840 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP1-213	ENST00000482967	MRC1	P22897	1456 aa		11.77	□□□□□ -0.52
CDK5RAP1-213	ENST00000482967	ZPR1	O75312	459 aa		11.77	□□□□□ -0.53
CDK5RAP1-213	ENST00000482967	IL13	P35225	146 aa		11.77	□□□□□ -0.53
CDK5RAP1-213	ENST00000482967	SLC52A2	Q9HAB3	445 aa		11.77	□□□□□ -0.53
CDK5RAP1-213	ENST00000482967	LGR6	Q9HBX8	967 aa		11.77	□□□□□ -0.53
CDK5RAP1-213	ENST00000482967	NFKBIE	O00221	500 aa		11.76	□□□□□ -0.53
CDK5RAP1-213	ENST00000482967	CYP19A1	P11511	503 aa	Predicted RBP	11.76	□□□□□ -0.53
CDK5RAP1-213	ENST00000482967	MORC1	Q86VD1	984 aa		11.76	□□□□□ -0.53
CDK5RAP1-213	ENST00000482967	TNS4	Q8IZW8	715 aa		11.76	□□□□□ -0.53
CDK5RAP1-213	ENST00000482967	NARF	Q9UHQ1	456 aa		11.76	□□□□□ -0.53
CDK5RAP1-213	ENST00000482967	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.76	□□□□□ -0.53
CDK5RAP1-213	ENST00000482967	SBF1	O95248	1867 aa		11.76	□□□□□ -0.53
CDK5RAP1-213	ENST00000482967	NRXN2	Q9P2S2	1712 aa		11.75	□□□□□ -0.53
CDK5RAP1-213	ENST00000482967	GLTPD2	A6NH11	291 aa		11.75	□□□□□ -0.53
CDK5RAP1-213	ENST00000482967	HSPA1A	P0DMV8	641 aa	Known RBP	11.75	□□□□□ -0.53
CDK5RAP1-213	ENST00000482967	HSPA1B	P0DMV9	641 aa	Known RBP	11.75	□□□□□ -0.53
CDK5RAP1-213	ENST00000482967	HSPA5	P11021	654 aa	Known RBP	11.75	□□□□□ -0.53
CDK5RAP1-213	ENST00000482967	LMNB1	P20700	586 aa		11.75	□□□□□ -0.53
CDK5RAP1-213	ENST00000482967	AKAP4	Q5JQC9	854 aa		11.75	□□□□□ -0.53
CDK5RAP1-213	ENST00000482967	SCN11A	Q9UI33	1791 aa		11.74	□□□□□ -0.53
CDK5RAP1-213	ENST00000482967	RNMT	O43148	476 aa	Known RBP	11.74	□□□□□ -0.53
CDK5RAP1-213	ENST00000482967	SERPINB2	P05120	415 aa		11.74	□□□□□ -0.53
CDK5RAP1-213	ENST00000482967	C2CD5	Q86YS7	1000 aa		11.74	□□□□□ -0.53
CDK5RAP1-213	ENST00000482967	AFDN	P55196	1824 aa	Known RBP	11.74	□□□□□ -0.53
CDK5RAP1-213	ENST00000482967	POTEC	B2RU33	542 aa		11.73	□□□□□ -0.53
CDK5RAP1-213	ENST00000482967	HMOX1	P09601	288 aa		11.73	□□□□□ -0.53
CDK5RAP1-213	ENST00000482967	VEGFA	P15692	232 aa	Predicted RBP	11.73	□□□□□ -0.53
CDK5RAP1-213	ENST00000482967	TIAM2	Q8IVF5	1701 aa		11.73	□□□□□ -0.53
CDK5RAP1-213	ENST00000482967	TTLL6	Q8N841	843 aa		11.73	□□□□□ -0.53
CDK5RAP1-213	ENST00000482967	DLEC1	Q9Y238	1755 aa		11.72	□□□□□ -0.53
CDK5RAP1-213	ENST00000482967	CANX	P27824	592 aa	Known RBP	11.72	□□□□□ -0.53
CDK5RAP1-213	ENST00000482967	BICDL1	Q6ZP65	573 aa		11.72	□□□□□ -0.53
CDK5RAP1-213	ENST00000482967	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.72	□□□□□ -0.53
CDK5RAP1-213	ENST00000482967	MTHFSD	Q2M296	383 aa	Known RBP	11.71	□□□□□ -0.53
CDK5RAP1-213	ENST00000482967	CCDC24	Q8N4L8	307 aa		11.71	□□□□□ -0.53
CDK5RAP1-213	ENST00000482967	TIMELESS	Q9UNS1	1208 aa		11.71	□□□□□ -0.53
CDK5RAP1-213	ENST00000482967		H0YIN7	160 aa		11.7	□□□□□ -0.54
CDK5RAP1-213	ENST00000482967	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.7	□□□□□ -0.54
CDK5RAP1-213	ENST00000482967	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.7	□□□□□ -0.54
CDK5RAP1-213	ENST00000482967	TBC1D9B	Q66K14	1250 aa		11.7	□□□□□ -0.54
CDK5RAP1-213	ENST00000482967	COL11A2	P13942	1736 aa	Predicted RBP	11.69	□□□□□ -0.54
CDK5RAP1-213	ENST00000482967	C21orf2	O43822	256 aa		11.69	□□□□□ -0.54
CDK5RAP1-213	ENST00000482967	POTEI	P0CG38	1075 aa		11.69	□□□□□ -0.54
CDK5RAP1-213	ENST00000482967	POTEJ	P0CG39	1038 aa		11.69	□□□□□ -0.54
CDK5RAP1-213	ENST00000482967	EIF5	P55010	431 aa	Known RBP	11.69	□□□□□ -0.54
CDK5RAP1-213	ENST00000482967	TRIM26	Q12899	539 aa	Predicted RBP	11.69	□□□□□ -0.54
CDK5RAP1-213	ENST00000482967	VSIG10	Q8N0Z9	540 aa		11.69	□□□□□ -0.54
CDK5RAP1-213	ENST00000482967	KNSTRN	Q9Y448	316 aa		11.69	□□□□□ -0.54
CDK5RAP1-213	ENST00000482967	SCN7A	Q01118	1682 aa		11.68	□□□□□ -0.54
CDK5RAP1-213	ENST00000482967	PRR5L	Q6MZQ0	368 aa		11.68	□□□□□ -0.54
CDK5RAP1-213	ENST00000482967	ZNF622	Q969S3	477 aa	Known RBP eCLIP	11.68	□□□□□ -0.54	2e-11	■■■□□ 17.1
CDK5RAP1-213	ENST00000482967	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.68	□□□□□ -0.54
CDK5RAP1-213	ENST00000482967	UBR2	Q8IWV8	1755 aa		11.68	□□□□□ -0.54
CDK5RAP1-213	ENST00000482967	ANKRD31	Q8N7Z5	1873 aa		11.68	□□□□□ -0.54
CDK5RAP1-213	ENST00000482967	ERFE	Q4G0M1	354 aa		11.67	□□□□□ -0.54
CDK5RAP1-213	ENST00000482967	ZNF496	Q96IT1	587 aa	Predicted RBP	11.67	□□□□□ -0.54
CDK5RAP1-213	ENST00000482967	MKRN1	Q9UHC7	482 aa	Known RBP	11.67	□□□□□ -0.54
CDK5RAP1-213	ENST00000482967	TTC5	Q8N0Z6	440 aa		11.66	□□□□□ -0.54
CDK5RAP1-213	ENST00000482967	BRIP1	Q9BX63	1249 aa		11.66	□□□□□ -0.54
CDK5RAP1-213	ENST00000482967	TBC1D2B	Q9UPU7	963 aa		11.66	□□□□□ -0.54
CDK5RAP1-213	ENST00000482967	HEG1	Q9ULI3	1381 aa		11.66	□□□□□ -0.54
CDK5RAP1-213	ENST00000482967		A0A087WZG4	1122 aa		11.65	□□□□□ -0.54
CDK5RAP1-213	ENST00000482967	DDN	O94850	711 aa	Predicted RBP	11.65	□□□□□ -0.54
CDK5RAP1-213	ENST00000482967	STARD3NL	O95772	234 aa		11.65	□□□□□ -0.54
CDK5RAP1-213	ENST00000482967	CHADL	Q6NUI6	762 aa		11.65	□□□□□ -0.54
CDK5RAP1-213	ENST00000482967	DPY19L2	Q6NUT2	758 aa		11.65	□□□□□ -0.54
CDK5RAP1-213	ENST00000482967	TAOK3	Q9H2K8	898 aa		11.65	□□□□□ -0.54
CDK5RAP1-213	ENST00000482967	CREBZF	Q9NS37	354 aa		11.65	□□□□□ -0.54
CDK5RAP1-213	ENST00000482967	COL3A1	P02461	1466 aa	Predicted RBP	11.64	□□□□□ -0.55
CDK5RAP1-213	ENST00000482967	LTBP3	Q9NS15	1303 aa		11.64	□□□□□ -0.55
CDK5RAP1-213	ENST00000482967	DIAPH1	O60610	1272 aa	Known RBP	11.64	□□□□□ -0.55
CDK5RAP1-213	ENST00000482967	CAMTA2	O94983	1202 aa		11.64	□□□□□ -0.55
CDK5RAP1-213	ENST00000482967	PDE6B	P35913	854 aa		11.64	□□□□□ -0.55
CDK5RAP1-213	ENST00000482967	PRPF40B	Q6NWY9	871 aa	Known RBP	11.64	□□□□□ -0.55
CDK5RAP1-213	ENST00000482967	CNBD1	Q8NA66	436 aa		11.64	□□□□□ -0.55
CDK5RAP1-213	ENST00000482967	IL17RE	Q8NFR9	667 aa		11.64	□□□□□ -0.55
CDK5RAP1-213	ENST00000482967	PCGF6	Q9BYE7	350 aa		11.64	□□□□□ -0.55
CDK5RAP1-213	ENST00000482967	CCDC88A	Q3V6T2	1871 aa		11.63	□□□□□ -0.55
CDK5RAP1-213	ENST00000482967	CLSPN	Q9HAW4	1339 aa		11.63	□□□□□ -0.55
CDK5RAP1-213	ENST00000482967	VIRMA	Q69YN4	1812 aa	Known RBP	11.63	□□□□□ -0.55
CDK5RAP1-213	ENST00000482967	FOXN1	O15353	648 aa		11.63	□□□□□ -0.55
CDK5RAP1-213	ENST00000482967	A1BG	P04217	495 aa		11.63	□□□□□ -0.55
CDK5RAP1-213	ENST00000482967	ZNF790	Q6PG37	636 aa		11.63	□□□□□ -0.55
CDK5RAP1-213	ENST00000482967	CNTNAP1	P78357	1384 aa		11.63	□□□□□ -0.55
CDK5RAP1-213	ENST00000482967	FER1L6	Q2WGJ9	1857 aa		11.63	□□□□□ -0.55
CDK5RAP1-213	ENST00000482967	KIF7	Q2M1P5	1343 aa		11.62	□□□□□ -0.55
CDK5RAP1-213	ENST00000482967	PASK	Q96RG2	1323 aa		11.62	□□□□□ -0.55
CDK5RAP1-213	ENST00000482967	KCNQ3	O43525	872 aa		11.62	□□□□□ -0.55
CDK5RAP1-213	ENST00000482967	SRGN	P10124	158 aa		11.62	□□□□□ -0.55
CDK5RAP1-213	ENST00000482967	IL6ST	P40189	918 aa	Predicted RBP	11.62	□□□□□ -0.55
CDK5RAP1-213	ENST00000482967	PIP4K2A	P48426	406 aa	Predicted RBP	11.62	□□□□□ -0.55
CDK5RAP1-213	ENST00000482967	TEF	Q10587	303 aa		11.62	□□□□□ -0.55
CDK5RAP1-213	ENST00000482967	CC2D1B	Q5T0F9	858 aa	Known RBP	11.62	□□□□□ -0.55
CDK5RAP1-213	ENST00000482967	STYK1	Q6J9G0	422 aa		11.62	□□□□□ -0.55
CDK5RAP1-213	ENST00000482967	PDZRN3	Q9UPQ7	1066 aa		11.62	□□□□□ -0.55
CDK5RAP1-213	ENST00000482967	ZNF541	Q9H0D2	1346 aa		11.61	□□□□□ -0.55
CDK5RAP1-213	ENST00000482967	SLX4	Q8IY92	1834 aa		11.61	□□□□□ -0.55
CDK5RAP1-213	ENST00000482967	NPHP1	O15259	732 aa		11.61	□□□□□ -0.55
CDK5RAP1-213	ENST00000482967	ST5	P78524	1137 aa		11.61	□□□□□ -0.55
CDK5RAP1-213	ENST00000482967	CNKSR1	Q969H4	720 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms