RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 CD163L1Q9NR16 1453 aa13.24□□□□□ -0.29
RPGR-208ENST00000482855 TECPR2O15040 1411 aa13.23□□□□□ -0.29
RPGR-208ENST00000482855 SSH2Q76I76 1423 aa13.23□□□□□ -0.29
RPGR-208ENST00000482855 ZSCAN22P10073 491 aaPredicted RBP13.23□□□□□ -0.29
RPGR-208ENST00000482855 NUTM2DQ5VT03 806 aaPredicted RBP13.23□□□□□ -0.29
RPGR-208ENST00000482855 MEIS3Q99687 375 aa13.23□□□□□ -0.29
RPGR-208ENST00000482855 FIBPO43427 364 aa13.23□□□□□ -0.29
RPGR-208ENST00000482855 SMTNL1A8MU46 457 aa13.22□□□□□ -0.29
RPGR-208ENST00000482855 LTKP29376 864 aa13.22□□□□□ -0.29
RPGR-208ENST00000482855 HAP1P54257 671 aaPredicted RBP13.22□□□□□ -0.29
RPGR-208ENST00000482855 ATP6V1DQ9Y5K8 247 aa13.22□□□□□ -0.29
RPGR-208ENST00000482855 VGFO15240 615 aaPredicted RBP13.22□□□□□ -0.29
RPGR-208ENST00000482855 KCNA6P17658 529 aa13.22□□□□□ -0.29
RPGR-208ENST00000482855 POLKQ9UBT6 870 aa13.22□□□□□ -0.29
RPGR-208ENST00000482855 MAP2P11137 1827 aaKnown RBP13.22□□□□□ -0.29
RPGR-208ENST00000482855 TUBGCP6Q96RT7 1819 aa13.22□□□□□ -0.29
RPGR-208ENST00000482855 KRT24Q2M2I5 525 aa13.21□□□□□ -0.29
RPGR-208ENST00000482855 TXNDC2Q86VQ3 553 aa13.21□□□□□ -0.29
RPGR-208ENST00000482855 STK26Q9P289 416 aa13.21□□□□□ -0.29
RPGR-208ENST00000482855 DDX41Q9UJV9 622 aaKnown RBP13.21□□□□□ -0.29
RPGR-208ENST00000482855 DLC1Q96QB1 1528 aa13.21□□□□□ -0.29
RPGR-208ENST00000482855 TRIM6-TRIM34B2RNG4 842 aa13.21□□□□□ -0.29
RPGR-208ENST00000482855 PTGS1P23219 599 aa13.21□□□□□ -0.29
RPGR-208ENST00000482855 CHMLP26374 656 aa13.21□□□□□ -0.29
RPGR-208ENST00000482855 TSHZ3Q63HK5 1081 aa13.21□□□□□ -0.29
RPGR-208ENST00000482855 RILPL2Q969X0 211 aa13.21□□□□□ -0.29
RPGR-208ENST00000482855 IL17RAQ96F46 866 aa13.21□□□□□ -0.29
RPGR-208ENST00000482855 STX6O43752 255 aa13.21□□□□□ -0.3
RPGR-208ENST00000482855 CCDC192P0DO97 292 aa13.21□□□□□ -0.3
RPGR-208ENST00000482855 MINK1Q8N4C8 1332 aaPredicted RBP13.2□□□□□ -0.3
RPGR-208ENST00000482855 CDK11BP21127 795 aaKnown RBP13.2□□□□□ -0.3
RPGR-208ENST00000482855 FBLN1P23142 703 aa13.2□□□□□ -0.3
RPGR-208ENST00000482855 C16orf45Q96MC5 204 aaPredicted RBP13.2□□□□□ -0.3
RPGR-208ENST00000482855 CPSF1Q10570 1443 aaKnown RBP13.2□□□□□ -0.3
RPGR-208ENST00000482855 PTPRCP08575 1304 aa13.2□□□□□ -0.3
RPGR-208ENST00000482855 CCDC66A2RUB6 948 aa13.2□□□□□ -0.3
RPGR-208ENST00000482855 FAM83GA6ND36 823 aa13.2□□□□□ -0.3
RPGR-208ENST00000482855 F13A1P00488 732 aa13.2□□□□□ -0.3
RPGR-208ENST00000482855 SLFN14P0C7P3 912 aa13.2□□□□□ -0.3
RPGR-208ENST00000482855 MORC2Q9Y6X9 1032 aaPredicted RBP13.19□□□□□ -0.3
RPGR-208ENST00000482855 TNNT1P13805 278 aa13.19□□□□□ -0.3
RPGR-208ENST00000482855 SYT1P21579 422 aa13.19□□□□□ -0.3
RPGR-208ENST00000482855 CCDC112Q8NEF3 446 aa13.19□□□□□ -0.3
RPGR-208ENST00000482855 PAXBP1Q9Y5B6 917 aa13.19□□□□□ -0.3
RPGR-208ENST00000482855 FAM200AQ8TCP9 573 aa13.18□□□□□ -0.3
RPGR-208ENST00000482855 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.18□□□□□ -0.3
RPGR-208ENST00000482855 DCTN1Q14203 1278 aa13.18□□□□□ -0.3
RPGR-208ENST00000482855 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.18□□□□□ -0.3
RPGR-208ENST00000482855 DRC7Q8IY82 874 aa13.18□□□□□ -0.3
RPGR-208ENST00000482855 EXOC6BQ9Y2D4 811 aa13.18□□□□□ -0.3
RPGR-208ENST00000482855 SALL3Q9BXA9 1300 aa13.18□□□□□ -0.3
RPGR-208ENST00000482855 CCDC186Q7Z3E2 898 aa13.17□□□□□ -0.3
RPGR-208ENST00000482855 LRRCC1Q9C099 1032 aa13.17□□□□□ -0.3
RPGR-208ENST00000482855 NAP1L2Q9ULW6 460 aaPredicted RBP13.17□□□□□ -0.3
RPGR-208ENST00000482855 SMC3Q9UQE7 1217 aa13.17□□□□□ -0.3
RPGR-208ENST00000482855 KIAA0232Q92628 1395 aa13.17□□□□□ -0.3
RPGR-208ENST00000482855 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.17□□□□□ -0.3
RPGR-208ENST00000482855 HSPA4P34932 840 aa13.17□□□□□ -0.3
RPGR-208ENST00000482855 IL13P35225 146 aa13.17□□□□□ -0.3
RPGR-208ENST00000482855 TERF2Q15554 542 aa13.17□□□□□ -0.3
RPGR-208ENST00000482855 KIF18AQ8NI77 898 aa13.17□□□□□ -0.3
RPGR-208ENST00000482855 ZNF335Q9H4Z2 1342 aaPredicted RBP13.17□□□□□ -0.3
RPGR-208ENST00000482855 AHDC1Q5TGY3 1603 aaPredicted RBP13.17□□□□□ -0.3
RPGR-208ENST00000482855 ZBTB22O15209 634 aa13.17□□□□□ -0.3
RPGR-208ENST00000482855 EPB41L2O43491 1005 aaKnown RBP13.17□□□□□ -0.3
RPGR-208ENST00000482855 KRT222Q8N1A0 295 aa13.17□□□□□ -0.3
RPGR-208ENST00000482855 SIRT1Q96EB6 747 aa13.16□□□□□ -0.3
RPGR-208ENST00000482855 CABP1Q9NZU7 370 aa13.16□□□□□ -0.3
RPGR-208ENST00000482855 YTHDC2Q9H6S0 1430 aaKnown RBP13.16□□□□□ -0.3
RPGR-208ENST00000482855 KCNJ4P48050 445 aa13.16□□□□□ -0.3
RPGR-208ENST00000482855 DNM1Q05193 864 aaKnown RBP13.16□□□□□ -0.3
RPGR-208ENST00000482855 LRMPQ12912 555 aa13.16□□□□□ -0.3
RPGR-208ENST00000482855 NAA30Q147X3 362 aaPredicted RBP13.16□□□□□ -0.3
RPGR-208ENST00000482855 STAG3Q9UJ98 1225 aa13.16□□□□□ -0.3
RPGR-208ENST00000482855 EMILIN1Q9Y6C2 1016 aa13.16□□□□□ -0.3
RPGR-208ENST00000482855 PRAM1Q96QH2 718 aa13.15□□□□□ -0.3
RPGR-208ENST00000482855 NALCNQ8IZF0 1738 aa13.15□□□□□ -0.3
RPGR-208ENST00000482855 NHSL1Q5SYE7 1610 aa13.15□□□□□ -0.3
RPGR-208ENST00000482855 MAP3K11Q16584 847 aa13.15□□□□□ -0.3
RPGR-208ENST00000482855 TPD52L1Q16890 204 aaPredicted RBP13.15□□□□□ -0.3
RPGR-208ENST00000482855 PLPPR3Q6T4P5 718 aa13.15□□□□□ -0.3
RPGR-208ENST00000482855 LIMCH1Q9UPQ0 1083 aa13.15□□□□□ -0.3
RPGR-208ENST00000482855 AK2P54819 239 aa13.14□□□□□ -0.31
RPGR-208ENST00000482855 SLC4A10Q6U841 1118 aa13.14□□□□□ -0.31
RPGR-208ENST00000482855 ZNF397Q8NF99 534 aaPredicted RBP13.14□□□□□ -0.31
RPGR-208ENST00000482855 VGLL3A8MV65 326 aa13.14□□□□□ -0.31
RPGR-208ENST00000482855 GNAI2P04899 355 aa13.14□□□□□ -0.31
RPGR-208ENST00000482855 IRX5P78411 483 aaPredicted RBP13.14□□□□□ -0.31
RPGR-208ENST00000482855 ZSCAN25Q6NSZ9 544 aa13.14□□□□□ -0.31
RPGR-208ENST00000482855 LUZP1Q86V48 1076 aa13.14□□□□□ -0.31
RPGR-208ENST00000482855 TIGD1Q96MW7 591 aa13.14□□□□□ -0.31
RPGR-208ENST00000482855 SENP3Q9H4L4 574 aaPredicted RBP13.14□□□□□ -0.31
RPGR-208ENST00000482855 CDK12Q9NYV4 1490 aaPredicted RBP13.14□□□□□ -0.31
RPGR-208ENST00000482855 TYRO3Q06418 890 aa13.13□□□□□ -0.31
RPGR-208ENST00000482855 CDK19Q9BWU1 502 aa13.13□□□□□ -0.31
RPGR-208ENST00000482855 TRIM5Q9C035 493 aa13.13□□□□□ -0.31
RPGR-208ENST00000482855 NUP62CLQ9H1M0 184 aa13.13□□□□□ -0.31
RPGR-208ENST00000482855 MRVI1Q9Y6F6 885 aa13.13□□□□□ -0.31
RPGR-208ENST00000482855 SLC4A2P04920 1241 aa13.13□□□□□ -0.31
RPGR-208ENST00000482855 CCT4P50991 539 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 179 ms