RNA–Protein interactions for RNA: ENST00000481347.1

TPR-206, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 5

Gene TPR, Length 2,727 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-206ENST00000481347 RGPD1P0DJD0 1748 aa13.03□□□□□ -0.32
TPR-206ENST00000481347 MRE11P49959 708 aa13.03□□□□□ -0.32
TPR-206ENST00000481347 INTS3Q68E01 1043 aaKnown RBP13.03□□□□□ -0.32
TPR-206ENST00000481347 R3HCC1Q9Y3T6 440 aaKnown RBP13.03□□□□□ -0.32
TPR-206ENST00000481347 KIF24Q5T7B8 1368 aa13.03□□□□□ -0.32
TPR-206ENST00000481347 MTHFSDQ2M296 383 aaKnown RBP13.03□□□□□ -0.32
TPR-206ENST00000481347 KIAA0232Q92628 1395 aa13.02□□□□□ -0.32
TPR-206ENST00000481347 SLIT1O75093 1534 aa13.02□□□□□ -0.32
TPR-206ENST00000481347 DIP2AQ14689 1571 aa13.02□□□□□ -0.32
TPR-206ENST00000481347 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.02□□□□□ -0.32
TPR-206ENST00000481347 RTF1Q92541 710 aaKnown RBP13.02□□□□□ -0.32
TPR-206ENST00000481347 SERPINA10Q9UK55 444 aa13.02□□□□□ -0.32
TPR-206ENST00000481347 SBNO1A3KN83 1393 aa13.02□□□□□ -0.33
TPR-206ENST00000481347 FLT4P35916 1363 aa13.02□□□□□ -0.33
TPR-206ENST00000481347 ARHGAP23Q9P227 1491 aa13.02□□□□□ -0.33
TPR-206ENST00000481347 CRB1P82279 1406 aa13.02□□□□□ -0.33
TPR-206ENST00000481347 RIMS1Q86UR5 1692 aaKnown RBP13.01□□□□□ -0.33
TPR-206ENST00000481347 THEMISQ8N1K5 641 aaPredicted RBP13.01□□□□□ -0.33
TPR-206ENST00000481347 RGS12O14924 1447 aa13.01□□□□□ -0.33
TPR-206ENST00000481347 RGPD8O14715 1765 aaPredicted RBP13.01□□□□□ -0.33
TPR-206ENST00000481347 UQCRHLA0A096LP55 91 aa13.01□□□□□ -0.33
TPR-206ENST00000481347 UQCRHP07919 91 aa13.01□□□□□ -0.33
TPR-206ENST00000481347 NUTM2GQ5VZR2 741 aa13.01□□□□□ -0.33
TPR-206ENST00000481347 TBC1D9Q6ZT07 1266 aa13.01□□□□□ -0.33
TPR-206ENST00000481347 FAM43BQ6ZT52 329 aaPredicted RBP13.01□□□□□ -0.33
TPR-206ENST00000481347 TSPYL4Q9UJ04 414 aa13.01□□□□□ -0.33
TPR-206ENST00000481347 FMN2Q9NZ56 1722 aa13□□□□□ -0.33
TPR-206ENST00000481347 MSH6P52701 1360 aa13□□□□□ -0.33
TPR-206ENST00000481347 NLRP6P59044 892 aa13□□□□□ -0.33
TPR-206ENST00000481347 CBX1P83916 185 aa13□□□□□ -0.33
TPR-206ENST00000481347 ZBTB9Q96C00 473 aa13□□□□□ -0.33
TPR-206ENST00000481347 EYA1Q99502 592 aa13□□□□□ -0.33
TPR-206ENST00000481347 DNAJC2Q99543 621 aaKnown RBP13□□□□□ -0.33
TPR-206ENST00000481347 DCTPP1Q9H773 170 aa13□□□□□ -0.33
TPR-206ENST00000481347 CHMP5Q9NZZ3 219 aa13□□□□□ -0.33
TPR-206ENST00000481347 PTPRCP08575 1304 aa12.99□□□□□ -0.33
TPR-206ENST00000481347 ANKRD44Q8N8A2 993 aa12.99□□□□□ -0.33
TPR-206ENST00000481347 ZNF622Q969S3 477 aaKnown RBP eCLIP12.99□□□□□ -0.337e-10■■■□□ 17.5
TPR-206ENST00000481347 SMARCA5O60264 1052 aaPredicted RBP12.99□□□□□ -0.33
TPR-206ENST00000481347 ARIH1Q9Y4X5 557 aaPredicted RBP12.99□□□□□ -0.33
TPR-206ENST00000481347 CEP170BQ9Y4F5 1589 aaPredicted RBP12.98□□□□□ -0.33
TPR-206ENST00000481347 PTMAP06454 111 aaKnown RBP12.98□□□□□ -0.33
TPR-206ENST00000481347 SLC20A2Q08357 652 aa12.98□□□□□ -0.33
TPR-206ENST00000481347 MEIS3Q99687 375 aa12.98□□□□□ -0.33
TPR-206ENST00000481347 FER1L4A9Z1Z3 1794 aa12.98□□□□□ -0.33
TPR-206ENST00000481347 ATP10DQ9P241 1426 aa12.98□□□□□ -0.33
TPR-206ENST00000481347 CDC45O75419 566 aa12.98□□□□□ -0.33
TPR-206ENST00000481347 KCNA6P17658 529 aa12.98□□□□□ -0.33
TPR-206ENST00000481347 CEP85Q6P2H3 762 aa12.98□□□□□ -0.33
TPR-206ENST00000481347 PLEKHM2Q8IWE5 1019 aa12.98□□□□□ -0.33
TPR-206ENST00000481347 C16orf71Q8IYS4 520 aaPredicted RBP12.98□□□□□ -0.33
TPR-206ENST00000481347 GAS2L2Q8NHY3 880 aa12.98□□□□□ -0.33
TPR-206ENST00000481347 IGSF1Q8N6C5 1336 aa12.98□□□□□ -0.33
TPR-206ENST00000481347 PIK3C2AO00443 1686 aa12.97□□□□□ -0.33
TPR-206ENST00000481347 DYNC1I1O14576 645 aa12.97□□□□□ -0.33
TPR-206ENST00000481347 GSPT1P15170 499 aaKnown RBP12.97□□□□□ -0.33
TPR-206ENST00000481347 SLC4A10Q6U841 1118 aa12.97□□□□□ -0.33
TPR-206ENST00000481347 RPAP2Q8IXW5 612 aaPredicted RBP12.97□□□□□ -0.33
TPR-206ENST00000481347 GRIPAP1Q4V328 841 aa12.97□□□□□ -0.33
TPR-206ENST00000481347 G2E3Q7L622 706 aa12.97□□□□□ -0.33
TPR-206ENST00000481347 RASEFQ8IZ41 740 aa12.97□□□□□ -0.33
TPR-206ENST00000481347 LARP6Q9BRS8 491 aaKnown RBP12.97□□□□□ -0.33
TPR-206ENST00000481347 GRPEL1Q9HAV7 217 aa12.97□□□□□ -0.33
TPR-206ENST00000481347 RTL1A6NKG5 1358 aa12.97□□□□□ -0.33
TPR-206ENST00000481347 KDRP35968 1356 aa12.97□□□□□ -0.33
TPR-206ENST00000481347 HSP90AB1P08238 724 aaKnown RBP12.97□□□□□ -0.33
TPR-206ENST00000481347 KCNJ4P48050 445 aa12.97□□□□□ -0.33
TPR-206ENST00000481347 SNX21Q969T3 373 aa12.97□□□□□ -0.33
TPR-206ENST00000481347 CCDC102AQ96A19 550 aa12.97□□□□□ -0.33
TPR-206ENST00000481347 LTV1Q96GA3 475 aaPredicted RBP12.97□□□□□ -0.33
TPR-206ENST00000481347 F6X3S4 739 aa12.96□□□□□ -0.33
TPR-206ENST00000481347 MCM4P33991 863 aa12.96□□□□□ -0.34
TPR-206ENST00000481347 TTC22Q5TAA0 569 aa12.96□□□□□ -0.34
TPR-206ENST00000481347 KIF2CQ99661 725 aa12.96□□□□□ -0.34
TPR-206ENST00000481347 SSUH2Q9Y2M2 353 aa12.96□□□□□ -0.34
TPR-206ENST00000481347 PRR29P0C7W0 189 aa12.95□□□□□ -0.34
TPR-206ENST00000481347 AXDND1Q5T1B0 1012 aaPredicted RBP12.95□□□□□ -0.34
TPR-206ENST00000481347 SMYD5Q6GMV2 418 aa12.95□□□□□ -0.34
TPR-206ENST00000481347 OTUD7AQ8TE49 926 aaPredicted RBP12.95□□□□□ -0.34
TPR-206ENST00000481347 XRN1Q8IZH2 1706 aaKnown RBP12.95□□□□□ -0.34
TPR-206ENST00000481347 PTMSP20962 102 aa12.95□□□□□ -0.34
TPR-206ENST00000481347 HOXC9P31274 260 aa12.95□□□□□ -0.34
TPR-206ENST00000481347 ABTB2Q8N961 1025 aa12.95□□□□□ -0.34
TPR-206ENST00000481347 ANKARQ7Z5J8 1434 aa12.94□□□□□ -0.34
TPR-206ENST00000481347 STK31Q9BXU1 1019 aa12.94□□□□□ -0.34
TPR-206ENST00000481347 GPR37O15354 613 aa12.94□□□□□ -0.34
TPR-206ENST00000481347 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.94□□□□□ -0.34
TPR-206ENST00000481347 GNAT3A8MTJ3 354 aa12.93□□□□□ -0.34
TPR-206ENST00000481347 FECHP22830 423 aa12.93□□□□□ -0.34
TPR-206ENST00000481347 RBM42Q9BTD8 480 aaKnown RBP12.93□□□□□ -0.34
TPR-206ENST00000481347 NCOA3Q9Y6Q9 1424 aa12.93□□□□□ -0.34
TPR-206ENST00000481347 CCT4P50991 539 aaKnown RBP12.93□□□□□ -0.34
TPR-206ENST00000481347 CD2BP2O95400 341 aaKnown RBP12.92□□□□□ -0.34
TPR-206ENST00000481347 ZSCAN30Q86W11 494 aa12.92□□□□□ -0.34
TPR-206ENST00000481347 HMMRO75330 724 aa12.92□□□□□ -0.34
TPR-206ENST00000481347 TICAM2Q86XR7 235 aa12.92□□□□□ -0.34
TPR-206ENST00000481347 HTATSF1O43719 755 aaKnown RBP12.91□□□□□ -0.34
TPR-206ENST00000481347 USHBP1Q8N6Y0 703 aa12.91□□□□□ -0.34
TPR-206ENST00000481347 IVNS1ABPQ9Y6Y0 642 aa12.91□□□□□ -0.34
TPR-206ENST00000481347 RFX1P22670 979 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms