RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 NCAPD2Q15021 1401 aa29.9■■■□□ 2.38
SYNGAP1-206ENST00000479510 SURF6O75683 361 aaKnown RBP29.9■■■□□ 2.38
SYNGAP1-206ENST00000479510 HSPA4P34932 840 aa29.9■■■□□ 2.38
SYNGAP1-206ENST00000479510 DNAAF4Q8WXU2 420 aa29.9■■■□□ 2.38
SYNGAP1-206ENST00000479510 BEND3Q5T5X7 828 aa29.89■■■□□ 2.38
SYNGAP1-206ENST00000479510 CHD2O14647 1828 aaKnown RBP29.89■■■□□ 2.38
SYNGAP1-206ENST00000479510 USP42Q9H9J4 1324 aaKnown RBP29.89■■■□□ 2.38
SYNGAP1-206ENST00000479510 NCLP19338 710 aaKnown RBP29.89■■■□□ 2.37
SYNGAP1-206ENST00000479510 AKAP4Q5JQC9 854 aa29.89■■■□□ 2.37
SYNGAP1-206ENST00000479510 UNC5CLQ8IV45 518 aa29.88■■■□□ 2.37
SYNGAP1-206ENST00000479510 PI4K2BQ8TCG2 481 aa29.88■■■□□ 2.37
SYNGAP1-206ENST00000479510 NBPF6Q5VWK0 638 aa29.87■■■□□ 2.37
SYNGAP1-206ENST00000479510 USHBP1Q8N6Y0 703 aa29.87■■■□□ 2.37
SYNGAP1-206ENST00000479510 GPT2Q8TD30 523 aa29.87■■■□□ 2.37
SYNGAP1-206ENST00000479510 NBPF4Q96M43 638 aa29.87■■■□□ 2.37
SYNGAP1-206ENST00000479510 AMOTQ4VCS5 1084 aa29.87■■■□□ 2.37
SYNGAP1-206ENST00000479510 HS1BP3Q53T59 392 aa29.87■■■□□ 2.37
SYNGAP1-206ENST00000479510 C14orf37Q86TY3 774 aa29.86■■■□□ 2.37
SYNGAP1-206ENST00000479510 IL1RAPL2Q9NP60 686 aa29.86■■■□□ 2.37
SYNGAP1-206ENST00000479510 HDAC5Q9UQL6 1122 aa29.86■■■□□ 2.37
SYNGAP1-206ENST00000479510 ERBB4Q15303 1308 aa29.86■■■□□ 2.37
SYNGAP1-206ENST00000479510 SRGAP3O43295 1099 aa29.86■■■□□ 2.37
SYNGAP1-206ENST00000479510 MTX1Q13505 466 aa29.86■■■□□ 2.37
SYNGAP1-206ENST00000479510 PLEKHO1Q53GL0 409 aaPredicted RBP29.86■■■□□ 2.37
SYNGAP1-206ENST00000479510 PLEKHG5O94827 1062 aa29.85■■■□□ 2.37
SYNGAP1-206ENST00000479510 CNTROBQ8N137 903 aa29.85■■■□□ 2.37
SYNGAP1-206ENST00000479510 DNAJC5Q9H3Z4 198 aa29.85■■■□□ 2.37
SYNGAP1-206ENST00000479510 TTC41PQ6P2S7 1318 aa29.85■■■□□ 2.37
SYNGAP1-206ENST00000479510 RAD50Q92878 1312 aa29.85■■■□□ 2.37
SYNGAP1-206ENST00000479510 CHPF2Q9P2E5 772 aa29.84■■■□□ 2.37
SYNGAP1-206ENST00000479510 CRYBG1Q9Y4K1 1723 aa29.84■■■□□ 2.37
SYNGAP1-206ENST00000479510 SGSM2O43147 1006 aa29.84■■■□□ 2.37
SYNGAP1-206ENST00000479510 EIF2S2P20042 333 aaKnown RBP29.83■■■□□ 2.37
SYNGAP1-206ENST00000479510 TEFQ10587 303 aa29.83■■■□□ 2.37
SYNGAP1-206ENST00000479510 NUTM1Q86Y26 1132 aa29.83■■■□□ 2.37
SYNGAP1-206ENST00000479510 LGR6Q9HBX8 967 aa29.83■■■□□ 2.37
SYNGAP1-206ENST00000479510 LMTK3Q96Q04 1460 aa29.82■■■□□ 2.36
SYNGAP1-206ENST00000479510 ALDH1L1O75891 902 aa29.82■■■□□ 2.36
SYNGAP1-206ENST00000479510 PI4KAP2A4QPH2 592 aa29.81■■■□□ 2.36
SYNGAP1-206ENST00000479510 NBPF7P0C2Y1 421 aaPredicted RBP29.81■■■□□ 2.36
SYNGAP1-206ENST00000479510 PI4KAP1Q8N8J0 262 aa29.81■■■□□ 2.36
SYNGAP1-206ENST00000479510 DBF4Q9UBU7 674 aaPredicted RBP29.81■■■□□ 2.36
SYNGAP1-206ENST00000479510 LRSAM1Q6UWE0 723 aa29.81■■■□□ 2.36
SYNGAP1-206ENST00000479510 ADCY9O60503 1353 aa29.8■■■□□ 2.36
SYNGAP1-206ENST00000479510 BTBD11A6QL63 1104 aa29.8■■■□□ 2.36
SYNGAP1-206ENST00000479510 ZNF530Q6P9A1 599 aaPredicted RBP29.8■■■□□ 2.36
SYNGAP1-206ENST00000479510 ZSCAN30Q86W11 494 aa29.8■■■□□ 2.36
SYNGAP1-206ENST00000479510 ANKLE2Q86XL3 938 aa29.8■■■□□ 2.36
SYNGAP1-206ENST00000479510 WDR33Q9C0J8 1336 aaKnown RBP29.79■■■□□ 2.36
SYNGAP1-206ENST00000479510 GLRX3O76003 335 aaKnown RBP29.79■■■□□ 2.36
SYNGAP1-206ENST00000479510 PSME1Q06323 249 aa29.79■■■□□ 2.36
SYNGAP1-206ENST00000479510 PDLIM2Q96JY6 352 aa29.78■■■□□ 2.36
SYNGAP1-206ENST00000479510 RBSNQ9H1K0 784 aa29.78■■■□□ 2.36
SYNGAP1-206ENST00000479510 PRIM1P49642 420 aaKnown RBP29.78■■■□□ 2.36
SYNGAP1-206ENST00000479510 ERC1Q8IUD2 1116 aa29.77■■■□□ 2.36
SYNGAP1-206ENST00000479510 SYAP1Q96A49 352 aaPredicted RBP29.77■■■□□ 2.36
SYNGAP1-206ENST00000479510 LSG1Q9H089 658 aaKnown RBP29.77■■■□□ 2.36
SYNGAP1-206ENST00000479510 TMEM63CQ9P1W3 806 aa29.77■■■□□ 2.36
SYNGAP1-206ENST00000479510 HEG1Q9ULI3 1381 aa29.77■■■□□ 2.36
SYNGAP1-206ENST00000479510 SLIT3O75094 1523 aa29.77■■■□□ 2.36
SYNGAP1-206ENST00000479510 NAP1L5Q96NT1 182 aaPredicted RBP29.76■■■□□ 2.36
SYNGAP1-206ENST00000479510 UPF3BQ9BZI7 483 aaKnown RBP29.76■■■□□ 2.36
SYNGAP1-206ENST00000479510 KIAA1211Q6ZU35 1233 aa29.76■■■□□ 2.35
SYNGAP1-206ENST00000479510 IL25Q9H293 177 aa29.76■■■□□ 2.35
SYNGAP1-206ENST00000479510 RNMTO43148 476 aaKnown RBP29.75■■■□□ 2.35
SYNGAP1-206ENST00000479510 RUFY2Q8WXA3 655 aa29.75■■■□□ 2.35
SYNGAP1-206ENST00000479510 C1orf141Q5JVX7 400 aa29.74■■■□□ 2.35
SYNGAP1-206ENST00000479510 TTC14Q96N46 770 aa29.74■■■□□ 2.35
SYNGAP1-206ENST00000479510 RBM27Q9P2N5 1060 aaKnown RBP29.74■■■□□ 2.35
SYNGAP1-206ENST00000479510 SNX14Q9Y5W7 946 aa29.74■■■□□ 2.35
SYNGAP1-206ENST00000479510 ZNF142P52746 1687 aaPredicted RBP29.74■■■□□ 2.35
SYNGAP1-206ENST00000479510 KCNQ3O43525 872 aa29.73■■■□□ 2.35
SYNGAP1-206ENST00000479510 GPATCH3Q96I76 525 aa29.73■■■□□ 2.35
SYNGAP1-206ENST00000479510 CAMTA1Q9Y6Y1 1673 aa29.73■■■□□ 2.35
SYNGAP1-206ENST00000479510 KSR2Q6VAB6 950 aa29.73■■■□□ 2.35
SYNGAP1-206ENST00000479510 ARHGEF25Q86VW2 580 aa29.73■■■□□ 2.35
SYNGAP1-206ENST00000479510 CLASRPQ8N2M8 674 aaKnown RBP29.73■■■□□ 2.35
SYNGAP1-206ENST00000479510 ESCO1Q5FWF5 840 aa29.72■■■□□ 2.35
SYNGAP1-206ENST00000479510 TMEM87AQ8NBN3 555 aa29.72■■■□□ 2.35
SYNGAP1-206ENST00000479510 GIGYF1O75420 1035 aaPredicted RBP29.71■■■□□ 2.35
SYNGAP1-206ENST00000479510 RGPD2P0DJD1 1756 aa29.7■■■□□ 2.35
SYNGAP1-206ENST00000479510 PHF14O94880 888 aa29.7■■■□□ 2.35
SYNGAP1-206ENST00000479510 OS9Q13438 667 aaPredicted RBP29.7■■■□□ 2.35
SYNGAP1-206ENST00000479510 ECHDC1Q9NTX5 307 aa29.7■■■□□ 2.35
SYNGAP1-206ENST00000479510 HYPKQ9NX55 129 aa29.7■■■□□ 2.35
SYNGAP1-206ENST00000479510 MPRIPQ6WCQ1 1025 aa29.7■■■□□ 2.34
SYNGAP1-206ENST00000479510 KLHL34Q8N239 644 aa29.7■■■□□ 2.34
SYNGAP1-206ENST00000479510 LIMCH1Q9UPQ0 1083 aa29.7■■■□□ 2.34
SYNGAP1-206ENST00000479510 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.69■■■□□ 2.34
SYNGAP1-206ENST00000479510 SYCE3A1L190 88 aa29.68■■■□□ 2.34
SYNGAP1-206ENST00000479510 FOXD4L5Q5VV16 416 aaPredicted RBP29.68■■■□□ 2.34
SYNGAP1-206ENST00000479510 NOL8Q76FK4 1167 aaKnown RBP29.68■■■□□ 2.34
SYNGAP1-206ENST00000479510 FOXD4L4Q8WXT5 416 aaPredicted RBP29.68■■■□□ 2.34
SYNGAP1-206ENST00000479510 C9orf78Q9NZ63 289 aaPredicted RBP29.68■■■□□ 2.34
SYNGAP1-206ENST00000479510 MAP3K2Q9Y2U5 619 aa29.68■■■□□ 2.34
SYNGAP1-206ENST00000479510 UTYO14607 1347 aa29.68■■■□□ 2.34
SYNGAP1-206ENST00000479510 MAP4K4O95819 1239 aaPredicted RBP29.68■■■□□ 2.34
SYNGAP1-206ENST00000479510 GCP02774 474 aa29.68■■■□□ 2.34
SYNGAP1-206ENST00000479510 MSNP26038 577 aaKnown RBP29.68■■■□□ 2.34
SYNGAP1-206ENST00000479510 KCNB2Q92953 911 aa29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms