RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 ZCCHC11Q5TAX3 1644 aaKnown RBP16.98■□□□□ 0.31
COL20A1-206ENST00000479501 LRRC59Q96AG4 307 aaKnown RBP16.98■□□□□ 0.31
COL20A1-206ENST00000479501 HOXC9P31274 260 aa16.97■□□□□ 0.31
COL20A1-206ENST00000479501 SETQ01105 290 aaPredicted RBP16.97■□□□□ 0.31
COL20A1-206ENST00000479501 RRP12Q5JTH9 1297 aaKnown RBP16.97■□□□□ 0.31
COL20A1-206ENST00000479501 PRDM15P57071 1507 aaPredicted RBP16.97■□□□□ 0.31
COL20A1-206ENST00000479501 ZNF521Q96K83 1311 aa16.97■□□□□ 0.31
COL20A1-206ENST00000479501 PLXNC1O60486 1568 aa16.97■□□□□ 0.31
COL20A1-206ENST00000479501 CHL1O00533 1208 aa16.97■□□□□ 0.31
COL20A1-206ENST00000479501 KDM4AO75164 1064 aa16.97■□□□□ 0.31
COL20A1-206ENST00000479501 ZSCAN25Q6NSZ9 544 aa16.97■□□□□ 0.31
COL20A1-206ENST00000479501 EVI5LQ96CN4 794 aa16.97■□□□□ 0.31
COL20A1-206ENST00000479501 ARGLU1Q9NWB6 273 aaPredicted RBP16.97■□□□□ 0.31
COL20A1-206ENST00000479501 STK38Q15208 465 aa16.97■□□□□ 0.31
COL20A1-206ENST00000479501 TRIM5Q9C035 493 aa16.97■□□□□ 0.31
COL20A1-206ENST00000479501 NAT10Q9H0A0 1025 aaKnown RBP16.97■□□□□ 0.31
COL20A1-206ENST00000479501 LIMCH1Q9UPQ0 1083 aa16.97■□□□□ 0.31
COL20A1-206ENST00000479501 SNRPA1P09661 255 aaKnown RBP16.96■□□□□ 0.31
COL20A1-206ENST00000479501 TSR1Q2NL82 804 aaKnown RBP16.96■□□□□ 0.31
COL20A1-206ENST00000479501 UBE3BQ7Z3V4 1068 aa16.96■□□□□ 0.31
COL20A1-206ENST00000479501 CCDC192P0DO97 292 aa16.96■□□□□ 0.31
COL20A1-206ENST00000479501 PLEKHM2Q8IWE5 1019 aa16.96■□□□□ 0.31
COL20A1-206ENST00000479501 MNS1Q8NEH6 495 aa16.96■□□□□ 0.31
COL20A1-206ENST00000479501 TPM1P09493 284 aa16.95■□□□□ 0.3
COL20A1-206ENST00000479501 SNX21Q969T3 373 aa16.95■□□□□ 0.3
COL20A1-206ENST00000479501 ATP5J2-PTCD1G3V325 749 aa16.95■□□□□ 0.3
COL20A1-206ENST00000479501 GCP02774 474 aa16.95■□□□□ 0.3
COL20A1-206ENST00000479501 XBP1P17861 261 aa16.95■□□□□ 0.3
COL20A1-206ENST00000479501 ANKRD13DQ6ZTN6 518 aa16.95■□□□□ 0.3
COL20A1-206ENST00000479501 FERMT3Q86UX7 667 aa16.95■□□□□ 0.3
COL20A1-206ENST00000479501 SH2B1Q9NRF2 756 aaPredicted RBP16.95■□□□□ 0.3
COL20A1-206ENST00000479501 MAP3K5Q99683 1374 aa16.95■□□□□ 0.3
COL20A1-206ENST00000479501 PLEKHG3A1L390 1219 aa16.95■□□□□ 0.3
COL20A1-206ENST00000479501 SYNMO15061 1565 aa16.95■□□□□ 0.3
COL20A1-206ENST00000479501 NUTM2BA6NNL0 878 aaPredicted RBP16.94■□□□□ 0.3
COL20A1-206ENST00000479501 NUTM2EB1AL46 878 aaPredicted RBP16.94■□□□□ 0.3
COL20A1-206ENST00000479501 MEX3CQ5U5Q3 659 aaKnown RBP16.94■□□□□ 0.3
COL20A1-206ENST00000479501 NUTM2AQ8IVF1 878 aaPredicted RBP16.94■□□□□ 0.3
COL20A1-206ENST00000479501 GNL3LQ9NVN8 582 aaKnown RBP16.94■□□□□ 0.3
COL20A1-206ENST00000479501 AKAP2Q9Y2D5 859 aa16.94■□□□□ 0.3
COL20A1-206ENST00000479501 ALDH1L1O75891 902 aa16.94■□□□□ 0.3
COL20A1-206ENST00000479501 IFIT1P09914 478 aaKnown RBP16.94■□□□□ 0.3
COL20A1-206ENST00000479501 IP6K1Q92551 441 aa16.94■□□□□ 0.3
COL20A1-206ENST00000479501 SIRT1Q96EB6 747 aa16.94■□□□□ 0.3
COL20A1-206ENST00000479501 SPATA32Q96LK8 384 aa16.94■□□□□ 0.3
COL20A1-206ENST00000479501 NACAP1Q9BZK3 213 aa16.94■□□□□ 0.3
COL20A1-206ENST00000479501 TNMDQ9H2S6 317 aa16.94■□□□□ 0.3
COL20A1-206ENST00000479501 ZBTB3Q9H5J0 574 aa16.94■□□□□ 0.3
COL20A1-206ENST00000479501 TMEM2Q9UHN6 1383 aa16.94■□□□□ 0.3
COL20A1-206ENST00000479501 SYCE3A1L190 88 aa16.94■□□□□ 0.3
COL20A1-206ENST00000479501 BAG4O95429 457 aaKnown RBP16.94■□□□□ 0.3
COL20A1-206ENST00000479501 ATP2B1P20020 1258 aa16.94■□□□□ 0.3
COL20A1-206ENST00000479501 SLC39A6Q13433 755 aa16.94■□□□□ 0.3
COL20A1-206ENST00000479501 METTL24Q5JXM2 366 aa16.94■□□□□ 0.3
COL20A1-206ENST00000479501 KSR2Q6VAB6 950 aa16.94■□□□□ 0.3
COL20A1-206ENST00000479501 G2E3Q7L622 706 aa16.94■□□□□ 0.3
COL20A1-206ENST00000479501 ME1P48163 572 aa16.93■□□□□ 0.3
COL20A1-206ENST00000479501 U3KPZ7 1027 aaPredicted RBP16.93■□□□□ 0.3
COL20A1-206ENST00000479501 IDH1O75874 414 aaKnown RBP16.93■□□□□ 0.3
COL20A1-206ENST00000479501 ESYT1Q9BSJ8 1104 aa16.93■□□□□ 0.3
COL20A1-206ENST00000479501 SBNO1A3KN83 1393 aa16.93■□□□□ 0.3
COL20A1-206ENST00000479501 ZFYVE16Q7Z3T8 1539 aa16.93■□□□□ 0.3
COL20A1-206ENST00000479501 CCDC66A2RUB6 948 aa16.93■□□□□ 0.3
COL20A1-206ENST00000479501 MPNDQ8N594 471 aa16.93■□□□□ 0.3
COL20A1-206ENST00000479501 DDX11Q96FC9 970 aa16.93■□□□□ 0.3
COL20A1-206ENST00000479501 COPS6Q7L5N1 327 aa16.92■□□□□ 0.3
COL20A1-206ENST00000479501 LARP6Q9BRS8 491 aaKnown RBP16.92■□□□□ 0.3
COL20A1-206ENST00000479501 CLSTN1O94985 981 aa16.92■□□□□ 0.3
COL20A1-206ENST00000479501 XAGE3Q8WTP9 111 aa16.92■□□□□ 0.3
COL20A1-206ENST00000479501 CFAP45Q9UL16 551 aa16.92■□□□□ 0.3
COL20A1-206ENST00000479501 GRM8O00222 908 aa16.92■□□□□ 0.3
COL20A1-206ENST00000479501 UQCRHLA0A096LP55 91 aa16.91■□□□□ 0.3
COL20A1-206ENST00000479501 UQCRHP07919 91 aa16.91■□□□□ 0.3
COL20A1-206ENST00000479501 BRMS1Q9HCU9 246 aa16.91■□□□□ 0.3
COL20A1-206ENST00000479501 IFIT5Q13325 482 aaKnown RBP16.91■□□□□ 0.3
COL20A1-206ENST00000479501 ZSCAN30Q86W11 494 aa16.91■□□□□ 0.3
COL20A1-206ENST00000479501 CFAP74Q9C0B2 1584 aa16.91■□□□□ 0.3
COL20A1-206ENST00000479501 NPHP3Q7Z494 1330 aa16.91■□□□□ 0.3
COL20A1-206ENST00000479501 IQGAP3Q86VI3 1631 aa16.91■□□□□ 0.3
COL20A1-206ENST00000479501 LTKP29376 864 aa16.91■□□□□ 0.3
COL20A1-206ENST00000479501 VPS53Q5VIR6 699 aa16.91■□□□□ 0.3
COL20A1-206ENST00000479501 JARID2Q92833 1246 aaPredicted RBP16.91■□□□□ 0.3
COL20A1-206ENST00000479501 TMX3Q96JJ7 454 aa16.91■□□□□ 0.3
COL20A1-206ENST00000479501 RAD21O60216 631 aa16.91■□□□□ 0.3
COL20A1-206ENST00000479501 IMMTQ16891 758 aaKnown RBP16.91■□□□□ 0.3
COL20A1-206ENST00000479501 ANKRD20A12PQ8NF67 263 aa16.91■□□□□ 0.3
COL20A1-206ENST00000479501 LINS1Q8NG48 757 aa16.91■□□□□ 0.3
COL20A1-206ENST00000479501 C19orf44Q9H6X5 657 aa16.91■□□□□ 0.3
COL20A1-206ENST00000479501 SOS1Q07889 1333 aaPredicted RBP16.91■□□□□ 0.3
COL20A1-206ENST00000479501 CCDC70Q6NSX1 233 aa16.9■□□□□ 0.3
COL20A1-206ENST00000479501 JMYQ8N9B5 988 aa16.9■□□□□ 0.3
COL20A1-206ENST00000479501 BCORL1Q5H9F3 1711 aa16.9■□□□□ 0.3
COL20A1-206ENST00000479501 PLEKHF1Q96S99 279 aa16.9■□□□□ 0.3
COL20A1-206ENST00000479501 PHAXQ9H814 394 aaKnown RBP16.9■□□□□ 0.3
COL20A1-206ENST00000479501 OLFM4Q6UX06 510 aa16.89■□□□□ 0.3
COL20A1-206ENST00000479501 NUP62CLQ9H1M0 184 aa16.89■□□□□ 0.3
COL20A1-206ENST00000479501 CCDC47Q96A33 483 aaKnown RBP16.89■□□□□ 0.29
COL20A1-206ENST00000479501 CWC25Q9NXE8 425 aaPredicted RBP16.89■□□□□ 0.29
COL20A1-206ENST00000479501 ANAPC15P60006 121 aa16.89■□□□□ 0.29
COL20A1-206ENST00000479501 TRIM22Q8IYM9 498 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms