RNA–Protein interactions for RNA: ENST00000479183.6

ECHDC2-209, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 2

Gene ECHDC2, Length 2,356 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-209ENST00000479183 BECN1Q14457 450 aa18.28■□□□□ 0.52
ECHDC2-209ENST00000479183 USP44Q9H0E7 712 aa18.28■□□□□ 0.52
ECHDC2-209ENST00000479183 PCDH11XQ9BZA7 1347 aa18.28■□□□□ 0.52
ECHDC2-209ENST00000479183 PCDH11YQ9BZA8 1340 aa18.28■□□□□ 0.52
ECHDC2-209ENST00000479183 LTBP4Q8N2S1 1624 aa18.28■□□□□ 0.52
ECHDC2-209ENST00000479183 DNAAF4Q8WXU2 420 aa18.27■□□□□ 0.52
ECHDC2-209ENST00000479183 ZNF496Q96IT1 587 aaPredicted RBP18.27■□□□□ 0.52
ECHDC2-209ENST00000479183 PXDNLA1KZ92 1463 aa18.27■□□□□ 0.52
ECHDC2-209ENST00000479183 TTC5Q8N0Z6 440 aa18.27■□□□□ 0.52
ECHDC2-209ENST00000479183 DDX54Q8TDD1 881 aaKnown RBP18.27■□□□□ 0.52
ECHDC2-209ENST00000479183 SRCIN1Q9C0H9 1055 aa18.27■□□□□ 0.52
ECHDC2-209ENST00000479183 PARP4Q9UKK3 1724 aaKnown RBP18.27■□□□□ 0.52
ECHDC2-209ENST00000479183 APBB1O00213 710 aa18.26■□□□□ 0.51
ECHDC2-209ENST00000479183 HMMRO75330 724 aa18.25■□□□□ 0.51
ECHDC2-209ENST00000479183 ADCY9O60503 1353 aa18.25■□□□□ 0.51
ECHDC2-209ENST00000479183 BEND3Q5T5X7 828 aa18.25■□□□□ 0.51
ECHDC2-209ENST00000479183 HYPKQ9NX55 129 aa18.25■□□□□ 0.51
ECHDC2-209ENST00000479183 LRRFIP2Q9Y608 721 aaKnown RBP18.25■□□□□ 0.51
ECHDC2-209ENST00000479183 UBTFL1P0CB47 393 aaPredicted RBP18.24■□□□□ 0.51
ECHDC2-209ENST00000479183 PDIA6Q15084 440 aa18.24■□□□□ 0.51
ECHDC2-209ENST00000479183 L1TD1Q5T7N2 865 aaKnown RBP18.24■□□□□ 0.51
ECHDC2-209ENST00000479183 DDX21Q9NR30 783 aaKnown RBP eCLIP18.24■□□□□ 0.51
ECHDC2-209ENST00000479183 MRC1P22897 1456 aa18.24■□□□□ 0.51
ECHDC2-209ENST00000479183 MAP3K2Q9Y2U5 619 aa18.24■□□□□ 0.51
ECHDC2-209ENST00000479183 N4BP2Q86UW6 1770 aaPredicted RBP18.23■□□□□ 0.51
ECHDC2-209ENST00000479183 PNMA6EA0A0J9YXQ4 647 aa18.23■□□□□ 0.51
ECHDC2-209ENST00000479183 AIMP1Q12904 312 aaKnown RBP18.23■□□□□ 0.51
ECHDC2-209ENST00000479183 C16orf71Q8IYS4 520 aaPredicted RBP18.23■□□□□ 0.51
ECHDC2-209ENST00000479183 USP16Q9Y5T5 823 aa18.23■□□□□ 0.51
ECHDC2-209ENST00000479183 SNRPA1P09661 255 aaKnown RBP18.23■□□□□ 0.51
ECHDC2-209ENST00000479183 MYL6BP14649 208 aa18.23■□□□□ 0.51
ECHDC2-209ENST00000479183 FMNL2Q96PY5 1086 aa18.23■□□□□ 0.51
ECHDC2-209ENST00000479183 SLKQ9H2G2 1235 aaPredicted RBP18.23■□□□□ 0.51
ECHDC2-209ENST00000479183 AHDC1Q5TGY3 1603 aaPredicted RBP18.22■□□□□ 0.51
ECHDC2-209ENST00000479183 SMARCA5O60264 1052 aaPredicted RBP18.22■□□□□ 0.51
ECHDC2-209ENST00000479183 NBPF7P0C2Y1 421 aaPredicted RBP18.22■□□□□ 0.51
ECHDC2-209ENST00000479183 KSR2Q6VAB6 950 aa18.22■□□□□ 0.51
ECHDC2-209ENST00000479183 C5P01031 1676 aa18.22■□□□□ 0.51
ECHDC2-209ENST00000479183 ATP8B2P98198 1209 aa18.22■□□□□ 0.51
ECHDC2-209ENST00000479183 NKX1-1Q15270 411 aaPredicted RBP18.21■□□□□ 0.51
ECHDC2-209ENST00000479183 RRAGDQ9NQL2 400 aaPredicted RBP18.21■□□□□ 0.51
ECHDC2-209ENST00000479183 ERVV-2B6SEH9 535 aa18.2■□□□□ 0.5
ECHDC2-209ENST00000479183 BMP2KLQ5H9B9 411 aa18.2■□□□□ 0.5
ECHDC2-209ENST00000479183 PLEKHM2Q8IWE5 1019 aa18.2■□□□□ 0.5
ECHDC2-209ENST00000479183 ANTXR1Q9H6X2 564 aa18.2■□□□□ 0.5
ECHDC2-209ENST00000479183 EXOC6BQ9Y2D4 811 aa18.2■□□□□ 0.5
ECHDC2-209ENST00000479183 PIP4K2AP48426 406 aaPredicted RBP18.2■□□□□ 0.5
ECHDC2-209ENST00000479183 UPF2Q9HAU5 1272 aaKnown RBP18.19■□□□□ 0.5
ECHDC2-209ENST00000479183 PIP4K2BP78356 416 aa18.19■□□□□ 0.5
ECHDC2-209ENST00000479183 OTUD7AQ8TE49 926 aaPredicted RBP18.19■□□□□ 0.5
ECHDC2-209ENST00000479183 DDX58O95786 925 aaKnown RBP18.18■□□□□ 0.5
ECHDC2-209ENST00000479183 CWF19L2Q2TBE0 894 aaKnown RBP18.18■□□□□ 0.5
ECHDC2-209ENST00000479183 SHANK3Q9BYB0 1731 aa18.18■□□□□ 0.5
ECHDC2-209ENST00000479183 ADAMTS2O95450 1211 aa18.18■□□□□ 0.5
ECHDC2-209ENST00000479183 COPS6Q7L5N1 327 aa18.17■□□□□ 0.5
ECHDC2-209ENST00000479183 COL14A1Q05707 1796 aaKnown RBP18.17■□□□□ 0.5
ECHDC2-209ENST00000479183 RIC3Q7Z5B4 369 aa18.17■□□□□ 0.5
ECHDC2-209ENST00000479183 XAGE3Q8WTP9 111 aa18.17■□□□□ 0.5
ECHDC2-209ENST00000479183 COL22A1Q8NFW1 1626 aaPredicted RBP18.16■□□□□ 0.5
ECHDC2-209ENST00000479183 MFAP1P55081 439 aaKnown RBP18.16■□□□□ 0.5
ECHDC2-209ENST00000479183 C9orf78Q9NZ63 289 aaPredicted RBP18.16■□□□□ 0.5
ECHDC2-209ENST00000479183 PTCD1O75127 700 aaKnown RBP18.16■□□□□ 0.5
ECHDC2-209ENST00000479183 PPP1R42Q7Z4L9 355 aa18.16■□□□□ 0.5
ECHDC2-209ENST00000479183 ALDH1L1O75891 902 aa18.15■□□□□ 0.5
ECHDC2-209ENST00000479183 GSPT1P15170 499 aaKnown RBP18.15■□□□□ 0.5
ECHDC2-209ENST00000479183 COL16A1Q07092 1604 aaPredicted RBP18.15■□□□□ 0.5
ECHDC2-209ENST00000479183 PHLPP1O60346 1717 aa18.15■□□□□ 0.5
ECHDC2-209ENST00000479183 LRP10Q7Z4F1 713 aa18.15■□□□□ 0.5
ECHDC2-209ENST00000479183 LINS1Q8NG48 757 aa18.15■□□□□ 0.5
ECHDC2-209ENST00000479183 SSH3Q8TE77 659 aa18.15■□□□□ 0.5
ECHDC2-209ENST00000479183 TBC1D32Q96NH3 1257 aa18.15■□□□□ 0.5
ECHDC2-209ENST00000479183 TOM1O60784 492 aa18.14■□□□□ 0.49
ECHDC2-209ENST00000479183 SRGAP3O43295 1099 aa18.13■□□□□ 0.49
ECHDC2-209ENST00000479183 LRRCC1Q9C099 1032 aa18.13■□□□□ 0.49
ECHDC2-209ENST00000479183 NUTM2BA6NNL0 878 aaPredicted RBP18.13■□□□□ 0.49
ECHDC2-209ENST00000479183 NUTM2EB1AL46 878 aaPredicted RBP18.13■□□□□ 0.49
ECHDC2-209ENST00000479183 TTC22Q5TAA0 569 aa18.13■□□□□ 0.49
ECHDC2-209ENST00000479183 ANKRD13DQ6ZTN6 518 aa18.13■□□□□ 0.49
ECHDC2-209ENST00000479183 NUTM2AQ8IVF1 878 aaPredicted RBP18.13■□□□□ 0.49
ECHDC2-209ENST00000479183 KAT6BQ8WYB5 2073 aa18.13■□□□□ 0.49
ECHDC2-209ENST00000479183 TBC1D2Q9BYX2 928 aa18.12■□□□□ 0.49
ECHDC2-209ENST00000479183 TMOD3Q9NYL9 352 aa18.12■□□□□ 0.49
ECHDC2-209ENST00000479183 IBTKQ9P2D0 1353 aaPredicted RBP18.12■□□□□ 0.49
ECHDC2-209ENST00000479183 IGKV5-2P06315 115 aa18.12■□□□□ 0.49
ECHDC2-209ENST00000479183 GLI3P10071 1580 aa18.11■□□□□ 0.49
ECHDC2-209ENST00000479183 RRP9O43818 475 aaKnown RBP18.11■□□□□ 0.49
ECHDC2-209ENST00000479183 POLA2Q14181 598 aa18.11■□□□□ 0.49
ECHDC2-209ENST00000479183 SURF6O75683 361 aaKnown RBP18.11■□□□□ 0.49
ECHDC2-209ENST00000479183 XRCC6P12956 609 aaKnown RBP eCLIP18.11■□□□□ 0.49
ECHDC2-209ENST00000479183 NEXNQ0ZGT2 675 aa18.11■□□□□ 0.49
ECHDC2-209ENST00000479183 GOLGA6L3A6NEY3 463 aa18.1■□□□□ 0.49
ECHDC2-209ENST00000479183 GRM8O00222 908 aa18.1■□□□□ 0.49
ECHDC2-209ENST00000479183 TBC1D9Q6ZT07 1266 aa18.1■□□□□ 0.49
ECHDC2-209ENST00000479183 MYD88Q99836 296 aa18.1■□□□□ 0.49
ECHDC2-209ENST00000479183 C22orf23Q9BZE7 217 aa18.1■□□□□ 0.49
ECHDC2-209ENST00000479183 DISP2A7MBM2 1401 aa18.1■□□□□ 0.49
ECHDC2-209ENST00000479183 TOGARAM1Q9Y4F4 1720 aa18.1■□□□□ 0.49
ECHDC2-209ENST00000479183 NBPF26B4DH59 902 aa18.1■□□□□ 0.49
ECHDC2-209ENST00000479183 EXOC5O00471 708 aa18.1■□□□□ 0.49
ECHDC2-209ENST00000479183 NBPF14Q5TI25 921 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms