RNA–Protein interactions for RNA: ENST00000478245.1

TCTN3-205, Transcript of tectonic family member 3, humanhuman

TSL 2

Gene TCTN3, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-205ENST00000478245 ABHD8Q96I13 439 aa13.1□□□□□ -0.31
TCTN3-205ENST00000478245 VIRMAQ69YN4 1812 aaKnown RBP13.1□□□□□ -0.31
TCTN3-205ENST00000478245 ANKRD26Q9UPS8 1709 aa13.1□□□□□ -0.31
TCTN3-205ENST00000478245 WASHC2AQ641Q2 1341 aa13.1□□□□□ -0.31
TCTN3-205ENST00000478245 H0YIN7 160 aa13.08□□□□□ -0.32
TCTN3-205ENST00000478245 NFKBIEO00221 500 aa13.08□□□□□ -0.32
TCTN3-205ENST00000478245 VEGFBP49765 207 aa13.08□□□□□ -0.32
TCTN3-205ENST00000478245 MLLT1Q03111 559 aaPredicted RBP13.08□□□□□ -0.32
TCTN3-205ENST00000478245 ERFEQ4G0M1 354 aa13.08□□□□□ -0.32
TCTN3-205ENST00000478245 USPL1Q5W0Q7 1092 aa13.08□□□□□ -0.32
TCTN3-205ENST00000478245 C2CD5Q86YS7 1000 aa13.08□□□□□ -0.32
TCTN3-205ENST00000478245 POTEIP0CG38 1075 aa13.07□□□□□ -0.32
TCTN3-205ENST00000478245 POTEJP0CG39 1038 aa13.07□□□□□ -0.32
TCTN3-205ENST00000478245 FER1L6Q2WGJ9 1857 aa13.07□□□□□ -0.32
TCTN3-205ENST00000478245 PDE4DIPQ5VU43 2346 aa13.07□□□□□ -0.32
TCTN3-205ENST00000478245 TJP1Q07157 1748 aa13.07□□□□□ -0.32
TCTN3-205ENST00000478245 NRXN2Q9P2S2 1712 aa13.06□□□□□ -0.32
TCTN3-205ENST00000478245 NFIXQ14938 502 aa13.06□□□□□ -0.32
TCTN3-205ENST00000478245 PLEKHO1Q53GL0 409 aaPredicted RBP13.06□□□□□ -0.32
TCTN3-205ENST00000478245 ZNF530Q6P9A1 599 aaPredicted RBP13.06□□□□□ -0.32
TCTN3-205ENST00000478245 WBP1LQ9NX94 342 aa13.06□□□□□ -0.32
TCTN3-205ENST00000478245 ZNF219Q9P2Y4 722 aaPredicted RBP13.06□□□□□ -0.32
TCTN3-205ENST00000478245 ADAMTS7Q9UKP4 1686 aa13.05□□□□□ -0.32
TCTN3-205ENST00000478245 CCDC85CA6NKD9 419 aa13.05□□□□□ -0.32
TCTN3-205ENST00000478245 TMEM88BA6NKF7 163 aa13.05□□□□□ -0.32
TCTN3-205ENST00000478245 SERPINB2P05120 415 aa13.05□□□□□ -0.32
TCTN3-205ENST00000478245 MTHFSP49914 203 aa13.05□□□□□ -0.32
TCTN3-205ENST00000478245 INTS5Q6P9B9 1019 aaKnown RBP13.05□□□□□ -0.32
TCTN3-205ENST00000478245 CACNA1SQ13698 1873 aa13.05□□□□□ -0.32
TCTN3-205ENST00000478245 SCN4AP35499 1836 aa13.04□□□□□ -0.32
TCTN3-205ENST00000478245 IQCA1LA6NCM1 817 aa13.04□□□□□ -0.32
TCTN3-205ENST00000478245 DDNO94850 711 aaPredicted RBP13.04□□□□□ -0.32
TCTN3-205ENST00000478245 NFATC2IPQ8NCF5 419 aa13.04□□□□□ -0.32
TCTN3-205ENST00000478245 ZNF622Q969S3 477 aaKnown RBP eCLIP13.04□□□□□ -0.32
TCTN3-205ENST00000478245 C21orf2O43822 256 aa13.03□□□□□ -0.32
TCTN3-205ENST00000478245 HSPA8P11142 646 aaKnown RBP13.03□□□□□ -0.32
TCTN3-205ENST00000478245 EIF4A2Q14240 407 aaKnown RBP13.03□□□□□ -0.32
TCTN3-205ENST00000478245 C1orf141Q5JVX7 400 aa13.03□□□□□ -0.32
TCTN3-205ENST00000478245 LDHDQ86WU2 507 aa13.03□□□□□ -0.32
TCTN3-205ENST00000478245 PASKQ96RG2 1323 aa13.03□□□□□ -0.32
TCTN3-205ENST00000478245 MAP2K1Q02750 393 aaPredicted RBP13.02□□□□□ -0.33
TCTN3-205ENST00000478245 AMOTQ4VCS5 1084 aa13.02□□□□□ -0.33
TCTN3-205ENST00000478245 CDCA8Q53HL2 280 aa13.02□□□□□ -0.33
TCTN3-205ENST00000478245 POLKQ9UBT6 870 aa13.02□□□□□ -0.33
TCTN3-205ENST00000478245 NARFQ9UHQ1 456 aa13.02□□□□□ -0.33
TCTN3-205ENST00000478245 SOS1Q07889 1333 aaPredicted RBP13.02□□□□□ -0.33
TCTN3-205ENST00000478245 DEFB115Q30KQ5 88 aa13.01□□□□□ -0.33
TCTN3-205ENST00000478245 EAPPQ56P03 285 aaPredicted RBP13.01□□□□□ -0.33
TCTN3-205ENST00000478245 BICDL1Q6ZP65 573 aa13.01□□□□□ -0.33
TCTN3-205ENST00000478245 DNAJC10Q8IXB1 793 aa13.01□□□□□ -0.33
TCTN3-205ENST00000478245 CARD14Q9BXL6 1004 aa13.01□□□□□ -0.33
TCTN3-205ENST00000478245 TAOK3Q9H2K8 898 aa13.01□□□□□ -0.33
TCTN3-205ENST00000478245 CLEC11AQ9Y240 323 aa13.01□□□□□ -0.33
TCTN3-205ENST00000478245 SCN11AQ9UI33 1791 aa13.01□□□□□ -0.33
TCTN3-205ENST00000478245 ANKRD31Q8N7Z5 1873 aa13.01□□□□□ -0.33
TCTN3-205ENST00000478245 COL15A1P39059 1388 aa13□□□□□ -0.33
TCTN3-205ENST00000478245 CARMIL3Q8ND23 1372 aa13□□□□□ -0.33
TCTN3-205ENST00000478245 TNNT2P45379 298 aaPredicted RBP13□□□□□ -0.33
TCTN3-205ENST00000478245 CFAP44Q96MT7 982 aa13□□□□□ -0.33
TCTN3-205ENST00000478245 LTBP3Q9NS15 1303 aa12.99□□□□□ -0.33
TCTN3-205ENST00000478245 ITGBL1O95965 494 aaPredicted RBP12.99□□□□□ -0.33
TCTN3-205ENST00000478245 PDE6BP35913 854 aa12.99□□□□□ -0.33
TCTN3-205ENST00000478245 RGS19P49795 217 aa12.99□□□□□ -0.33
TCTN3-205ENST00000478245 BEGAINQ9BUH8 593 aa12.99□□□□□ -0.33
TCTN3-205ENST00000478245 TAF1DQ9H5J8 278 aaPredicted RBP12.99□□□□□ -0.33
TCTN3-205ENST00000478245 PDZRN3Q9UPQ7 1066 aa12.99□□□□□ -0.33
TCTN3-205ENST00000478245 SLX4Q8IY92 1834 aa12.99□□□□□ -0.33
TCTN3-205ENST00000478245 TNRC18O15417 2968 aaPredicted RBP12.99□□□□□ -0.33
TCTN3-205ENST00000478245 WDR33Q9C0J8 1336 aaKnown RBP12.98□□□□□ -0.33
TCTN3-205ENST00000478245 RASSF10A6NK89 507 aa12.98□□□□□ -0.33
TCTN3-205ENST00000478245 CYP19A1P11511 503 aaPredicted RBP12.98□□□□□ -0.33
TCTN3-205ENST00000478245 BCL2L12Q9HB09 334 aa12.98□□□□□ -0.33
TCTN3-205ENST00000478245 ABT1Q9ULW3 272 aaKnown RBP12.98□□□□□ -0.33
TCTN3-205ENST00000478245 COL11A2P13942 1736 aaPredicted RBP12.98□□□□□ -0.33
TCTN3-205ENST00000478245 NPHP1O15259 732 aa12.97□□□□□ -0.33
TCTN3-205ENST00000478245 L3MBTL3Q96JM7 780 aaPredicted RBP12.97□□□□□ -0.33
TCTN3-205ENST00000478245 BRIP1Q9BX63 1249 aa12.97□□□□□ -0.33
TCTN3-205ENST00000478245 CASP8AP2Q9UKL3 1982 aa12.96□□□□□ -0.33
TCTN3-205ENST00000478245 SOGA3Q5TF21 947 aa12.96□□□□□ -0.33
TCTN3-205ENST00000478245 PAXIP1Q6ZW49 1069 aaPredicted RBP12.96□□□□□ -0.33
TCTN3-205ENST00000478245 HACL1Q9UJ83 578 aa12.96□□□□□ -0.33
TCTN3-205ENST00000478245 ZBTB1Q9Y2K1 713 aa12.96□□□□□ -0.33
TCTN3-205ENST00000478245 CANXP27824 592 aaKnown RBP12.95□□□□□ -0.34
TCTN3-205ENST00000478245 CNTROBQ8N137 903 aa12.95□□□□□ -0.34
TCTN3-205ENST00000478245 CCDC24Q8N4L8 307 aa12.95□□□□□ -0.34
TCTN3-205ENST00000478245 CNKSR1Q969H4 720 aa12.95□□□□□ -0.34
TCTN3-205ENST00000478245 ARFGEF2Q9Y6D5 1785 aa12.94□□□□□ -0.34
TCTN3-205ENST00000478245 EPHX2P34913 555 aa12.94□□□□□ -0.34
TCTN3-205ENST00000478245 GRM1Q13255 1194 aa12.94□□□□□ -0.34
TCTN3-205ENST00000478245 MAP1SQ66K74 1059 aaPredicted RBP12.94□□□□□ -0.34
TCTN3-205ENST00000478245 PRPF40BQ6NWY9 871 aaKnown RBP12.94□□□□□ -0.34
TCTN3-205ENST00000478245 PNMA8AQ86V59 439 aaPredicted RBP12.94□□□□□ -0.34
TCTN3-205ENST00000478245 TRPM7Q96QT4 1865 aa12.93□□□□□ -0.34
TCTN3-205ENST00000478245 A0A087WZG4 1122 aa12.93□□□□□ -0.34
TCTN3-205ENST00000478245 SLC39A6Q13433 755 aa12.93□□□□□ -0.34
TCTN3-205ENST00000478245 TBC1D9BQ66K14 1250 aa12.93□□□□□ -0.34
TCTN3-205ENST00000478245 PRR5LQ6MZQ0 368 aa12.93□□□□□ -0.34
TCTN3-205ENST00000478245 AEBP1Q8IUX7 1158 aa12.93□□□□□ -0.34
TCTN3-205ENST00000478245 SLC52A2Q9HAB3 445 aa12.93□□□□□ -0.34
TCTN3-205ENST00000478245 ADAMTSL1Q8N6G6 1762 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms