RNA–Protein interactions for RNA: ENST00000477155.5

CCDC30-209, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 3,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-209ENST00000477155 DCTPP1Q9H773 170 aa8.29□□□□□ -1.08
CCDC30-209ENST00000477155 ZBTB47Q9UFB7 747 aaPredicted RBP8.29□□□□□ -1.08
CCDC30-209ENST00000477155 SMARCA5O60264 1052 aaPredicted RBP8.28□□□□□ -1.08
CCDC30-209ENST00000477155 SEC24BO95487 1268 aa8.28□□□□□ -1.08
CCDC30-209ENST00000477155 CWF19L2Q2TBE0 894 aaKnown RBP8.28□□□□□ -1.08
CCDC30-209ENST00000477155 BEND3Q5T5X7 828 aa8.28□□□□□ -1.08
CCDC30-209ENST00000477155 RIC3Q7Z5B4 369 aa8.28□□□□□ -1.08
CCDC30-209ENST00000477155 C16orf71Q8IYS4 520 aaPredicted RBP8.28□□□□□ -1.08
CCDC30-209ENST00000477155 SCN11AQ9UI33 1791 aa8.28□□□□□ -1.08
CCDC30-209ENST00000477155 PNMA6EA0A0J9YXQ4 647 aa8.28□□□□□ -1.08
CCDC30-209ENST00000477155 KSR2Q6VAB6 950 aa8.28□□□□□ -1.08
CCDC30-209ENST00000477155 XAGE3Q8WTP9 111 aa8.28□□□□□ -1.08
CCDC30-209ENST00000477155 TMOD3Q9NYL9 352 aa8.28□□□□□ -1.08
CCDC30-209ENST00000477155 NKX1-1Q15270 411 aaPredicted RBP8.28□□□□□ -1.08
CCDC30-209ENST00000477155 EXOC6BQ9Y2D4 811 aa8.28□□□□□ -1.08
CCDC30-209ENST00000477155 ADCY9O60503 1353 aa8.28□□□□□ -1.08
CCDC30-209ENST00000477155 ATP10DQ9P241 1426 aa8.28□□□□□ -1.08
CCDC30-209ENST00000477155 AHDC1Q5TGY3 1603 aaPredicted RBP8.28□□□□□ -1.08
CCDC30-209ENST00000477155 MSH5O43196 834 aa8.27□□□□□ -1.08
CCDC30-209ENST00000477155 C8orf37Q96NL8 207 aa8.27□□□□□ -1.08
CCDC30-209ENST00000477155 C9orf78Q9NZ63 289 aaPredicted RBP8.27□□□□□ -1.08
CCDC30-209ENST00000477155 ASAP1Q9ULH1 1129 aa8.27□□□□□ -1.08
CCDC30-209ENST00000477155 CACNA1FO60840 1977 aa8.27□□□□□ -1.09
CCDC30-209ENST00000477155 HMMRO75330 724 aa8.27□□□□□ -1.09
CCDC30-209ENST00000477155 ZNF330Q9Y3S2 320 aaPredicted RBP8.27□□□□□ -1.09
CCDC30-209ENST00000477155 DDX58O95786 925 aaKnown RBP8.27□□□□□ -1.09
CCDC30-209ENST00000477155 A1BGP04217 495 aa8.27□□□□□ -1.09
CCDC30-209ENST00000477155 PIGBQ92521 554 aa8.27□□□□□ -1.09
CCDC30-209ENST00000477155 NGLY1Q96IV0 654 aa8.27□□□□□ -1.09
CCDC30-209ENST00000477155 RBM42Q9BTD8 480 aaKnown RBP8.27□□□□□ -1.09
CCDC30-209ENST00000477155 PHLPP1O60346 1717 aa8.27□□□□□ -1.09
CCDC30-209ENST00000477155 ARXQ96QS3 562 aa8.26□□□□□ -1.09
CCDC30-209ENST00000477155 SIPA1L3O60292 1781 aaPredicted RBP8.26□□□□□ -1.09
CCDC30-209ENST00000477155 ATP8B2P98198 1209 aa8.26□□□□□ -1.09
CCDC30-209ENST00000477155 OTUD7AQ8TE49 926 aaPredicted RBP8.26□□□□□ -1.09
CCDC30-209ENST00000477155 JARID2Q92833 1246 aaPredicted RBP8.26□□□□□ -1.09
CCDC30-209ENST00000477155 PKD1L3Q7Z443 1732 aa8.26□□□□□ -1.09
CCDC30-209ENST00000477155 ANKRD13DQ6ZTN6 518 aa8.26□□□□□ -1.09
CCDC30-209ENST00000477155 ADAMTS7Q9UKP4 1686 aa8.26□□□□□ -1.09
CCDC30-209ENST00000477155 PPP1R42Q7Z4L9 355 aa8.25□□□□□ -1.09
CCDC30-209ENST00000477155 MYD88Q99836 296 aa8.25□□□□□ -1.09
CCDC30-209ENST00000477155 NBPF26B4DH59 902 aa8.25□□□□□ -1.09
CCDC30-209ENST00000477155 ATP5J2-PTCD1G3V325 749 aa8.25□□□□□ -1.09
CCDC30-209ENST00000477155 PRIM1P49642 420 aaKnown RBP8.25□□□□□ -1.09
CCDC30-209ENST00000477155 DDB1Q16531 1140 aa8.25□□□□□ -1.09
CCDC30-209ENST00000477155 NBPF14Q5TI25 921 aa8.25□□□□□ -1.09
CCDC30-209ENST00000477155 NBPF10Q6P3W6 841 aaKnown RBP8.25□□□□□ -1.09
CCDC30-209ENST00000477155 NBPF15Q8N660 670 aa8.25□□□□□ -1.09
CCDC30-209ENST00000477155 ACSBG1Q96GR2 724 aa8.25□□□□□ -1.09
CCDC30-209ENST00000477155 PARP4Q9UKK3 1724 aaKnown RBP8.25□□□□□ -1.09
CCDC30-209ENST00000477155 SRGAP3O43295 1099 aa8.25□□□□□ -1.09
CCDC30-209ENST00000477155 MYT1Q01538 1121 aa8.25□□□□□ -1.09
CCDC30-209ENST00000477155 SPATA31A1Q5TZJ5 1347 aa8.25□□□□□ -1.09
CCDC30-209ENST00000477155 PLEKHG2Q9H7P9 1386 aa8.25□□□□□ -1.09
CCDC30-209ENST00000477155 NEXNQ0ZGT2 675 aa8.24□□□□□ -1.09
CCDC30-209ENST00000477155 LINS1Q8NG48 757 aa8.24□□□□□ -1.09
CCDC30-209ENST00000477155 COL16A1Q07092 1604 aaPredicted RBP8.24□□□□□ -1.09
CCDC30-209ENST00000477155 COL14A1Q05707 1796 aaKnown RBP8.24□□□□□ -1.09
CCDC30-209ENST00000477155 IGKV5-2P06315 115 aa8.24□□□□□ -1.09
CCDC30-209ENST00000477155 IPO9Q96P70 1041 aaKnown RBP8.24□□□□□ -1.09
CCDC30-209ENST00000477155 ATG3Q9NT62 314 aa8.24□□□□□ -1.09
CCDC30-209ENST00000477155 SURF6O75683 361 aaKnown RBP8.24□□□□□ -1.09
CCDC30-209ENST00000477155 FAM98CQ17RN3 349 aaKnown RBP8.24□□□□□ -1.09
CCDC30-209ENST00000477155 RTL5Q5HYW3 569 aaPredicted RBP8.24□□□□□ -1.09
CCDC30-209ENST00000477155 TTLL7Q6ZT98 887 aa8.24□□□□□ -1.09
CCDC30-209ENST00000477155 LRP10Q7Z4F1 713 aa8.24□□□□□ -1.09
CCDC30-209ENST00000477155 PLEKHM2Q8IWE5 1019 aa8.24□□□□□ -1.09
CCDC30-209ENST00000477155 DNAJC10Q8IXB1 793 aa8.24□□□□□ -1.09
CCDC30-209ENST00000477155 MRC1P22897 1456 aa8.24□□□□□ -1.09
CCDC30-209ENST00000477155 CERKQ8TCT0 537 aa8.23□□□□□ -1.09
CCDC30-209ENST00000477155 GRM8O00222 908 aa8.23□□□□□ -1.09
CCDC30-209ENST00000477155 ALDH1L1O75891 902 aa8.23□□□□□ -1.09
CCDC30-209ENST00000477155 MFAP1P55081 439 aaKnown RBP8.23□□□□□ -1.09
CCDC30-209ENST00000477155 ZBTB3Q9H5J0 574 aa8.23□□□□□ -1.09
CCDC30-209ENST00000477155 IL1RAPL2Q9NP60 686 aa8.23□□□□□ -1.09
CCDC30-209ENST00000477155 C5P01031 1676 aa8.23□□□□□ -1.09
CCDC30-209ENST00000477155 TSHZ3Q63HK5 1081 aa8.23□□□□□ -1.09
CCDC30-209ENST00000477155 METTL22Q9BUU2 404 aaPredicted RBP8.23□□□□□ -1.09
CCDC30-209ENST00000477155 SPATA31A5Q5VU36 1347 aa8.22□□□□□ -1.09
CCDC30-209ENST00000477155 SPATA31A7Q8IWB4 1347 aa8.22□□□□□ -1.09
CCDC30-209ENST00000477155 UNC5CLQ8IV45 518 aa8.22□□□□□ -1.09
CCDC30-209ENST00000477155 MARCH10Q8NA82 808 aaPredicted RBP8.22□□□□□ -1.09
CCDC30-209ENST00000477155 LRRCC1Q9C099 1032 aa8.22□□□□□ -1.09
CCDC30-209ENST00000477155 COL22A1Q8NFW1 1626 aaPredicted RBP8.22□□□□□ -1.09
CCDC30-209ENST00000477155 DISP2A7MBM2 1401 aa8.22□□□□□ -1.09
CCDC30-209ENST00000477155 NEURL1BA8MQ27 555 aa8.22□□□□□ -1.09
CCDC30-209ENST00000477155 SLC4A3P48751 1232 aa8.22□□□□□ -1.09
CCDC30-209ENST00000477155 SUCLG2Q96I99 432 aa8.22□□□□□ -1.09
CCDC30-209ENST00000477155 PXDNLA1KZ92 1463 aa8.22□□□□□ -1.09
CCDC30-209ENST00000477155 GCKRQ14397 625 aa8.22□□□□□ -1.09
CCDC30-209ENST00000477155 SSH3Q8TE77 659 aa8.22□□□□□ -1.09
CCDC30-209ENST00000477155 OS9Q13438 667 aaPredicted RBP8.21□□□□□ -1.09
CCDC30-209ENST00000477155 BMP2KLQ5H9B9 411 aa8.21□□□□□ -1.09
CCDC30-209ENST00000477155 ERICH6Q7L0X2 663 aa8.21□□□□□ -1.09
CCDC30-209ENST00000477155 BICC1Q9H694 974 aaKnown RBP8.21□□□□□ -1.09
CCDC30-209ENST00000477155 UPF2Q9HAU5 1272 aaKnown RBP8.21□□□□□ -1.09
CCDC30-209ENST00000477155 PA2G4Q9UQ80 394 aaKnown RBP8.21□□□□□ -1.09
CCDC30-209ENST00000477155 THRAP3Q9Y2W1 955 aaKnown RBP8.21□□□□□ -1.09
CCDC30-209ENST00000477155 GSPT1P15170 499 aaKnown RBP8.21□□□□□ -1.1
CCDC30-209ENST00000477155 PLBD2Q8NHP8 589 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms