RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 AKAP4Q5JQC9 854 aa25.71■■□□□ 1.71
LIMS2-214ENST00000476932 IL25Q9H293 177 aa25.71■■□□□ 1.71
LIMS2-214ENST00000476932 DDX49Q9Y6V7 483 aaKnown RBP25.71■■□□□ 1.71
LIMS2-214ENST00000476932 RAB11FIP3O75154 756 aa25.7■■□□□ 1.7
LIMS2-214ENST00000476932 ANAPC15P60006 121 aa25.7■■□□□ 1.7
LIMS2-214ENST00000476932 TMX3Q96JJ7 454 aa25.7■■□□□ 1.7
LIMS2-214ENST00000476932 ZNF530Q6P9A1 599 aaPredicted RBP25.7■■□□□ 1.7
LIMS2-214ENST00000476932 DNAAF4Q8WXU2 420 aa25.7■■□□□ 1.7
LIMS2-214ENST00000476932 ANO2Q9NQ90 1003 aa25.7■■□□□ 1.7
LIMS2-214ENST00000476932 PI4KAP2A4QPH2 592 aa25.69■■□□□ 1.7
LIMS2-214ENST00000476932 NUTM1Q86Y26 1132 aa25.69■■□□□ 1.7
LIMS2-214ENST00000476932 PI4KAP1Q8N8J0 262 aa25.69■■□□□ 1.7
LIMS2-214ENST00000476932 ZBTB7CA1YPR0 619 aa25.68■■□□□ 1.7
LIMS2-214ENST00000476932 PI4K2BQ8TCG2 481 aa25.68■■□□□ 1.7
LIMS2-214ENST00000476932 OVOS2A0A0G2JMS6 1433 aa25.68■■□□□ 1.7
LIMS2-214ENST00000476932 SURF6O75683 361 aaKnown RBP25.68■■□□□ 1.7
LIMS2-214ENST00000476932 RHPN1Q8TCX5 695 aa25.68■■□□□ 1.7
LIMS2-214ENST00000476932 ANXA1P04083 346 aa25.67■■□□□ 1.7
LIMS2-214ENST00000476932 MPRIPQ6WCQ1 1025 aa25.67■■□□□ 1.7
LIMS2-214ENST00000476932 ADAMTS7Q9UKP4 1686 aa25.67■■□□□ 1.7
LIMS2-214ENST00000476932 SRGAP3O43295 1099 aa25.67■■□□□ 1.7
LIMS2-214ENST00000476932 MCCP23508 829 aa25.67■■□□□ 1.7
LIMS2-214ENST00000476932 RGPD5Q99666 1765 aa25.66■■□□□ 1.7
LIMS2-214ENST00000476932 BTBD11A6QL63 1104 aa25.66■■□□□ 1.7
LIMS2-214ENST00000476932 TEFQ10587 303 aa25.66■■□□□ 1.7
LIMS2-214ENST00000476932 CUL4AQ13619 759 aa25.66■■□□□ 1.7
LIMS2-214ENST00000476932 ARHGEF25Q86VW2 580 aa25.66■■□□□ 1.7
LIMS2-214ENST00000476932 MCM2P49736 904 aa25.66■■□□□ 1.7
LIMS2-214ENST00000476932 PLEKHO1Q53GL0 409 aaPredicted RBP25.66■■□□□ 1.7
LIMS2-214ENST00000476932 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.65■■□□□ 1.7
LIMS2-214ENST00000476932 HEG1Q9ULI3 1381 aa25.65■■□□□ 1.7
LIMS2-214ENST00000476932 RNMTO43148 476 aaKnown RBP25.64■■□□□ 1.7
LIMS2-214ENST00000476932 GCP02774 474 aa25.64■■□□□ 1.7
LIMS2-214ENST00000476932 KIF1BPQ96EK5 621 aa25.64■■□□□ 1.7
LIMS2-214ENST00000476932 ADAMTSL3P82987 1691 aa25.64■■□□□ 1.69
LIMS2-214ENST00000476932 ORAI2Q96SN7 254 aa25.63■■□□□ 1.69
LIMS2-214ENST00000476932 EPB41L2O43491 1005 aaKnown RBP25.63■■□□□ 1.69
LIMS2-214ENST00000476932 ZNF445P59923 1031 aa25.62■■□□□ 1.69
LIMS2-214ENST00000476932 AMOTQ4VCS5 1084 aa25.62■■□□□ 1.69
LIMS2-214ENST00000476932 CHMP4AQ9BY43 222 aa25.62■■□□□ 1.69
LIMS2-214ENST00000476932 XPCQ01831 940 aaPredicted RBP25.62■■□□□ 1.69
LIMS2-214ENST00000476932 CHAMP1Q96JM3 812 aa25.62■■□□□ 1.69
LIMS2-214ENST00000476932 LMTK3Q96Q04 1460 aa25.62■■□□□ 1.69
LIMS2-214ENST00000476932 MAP4K4O95819 1239 aaPredicted RBP25.61■■□□□ 1.69
LIMS2-214ENST00000476932 HSPA4P34932 840 aa25.61■■□□□ 1.69
LIMS2-214ENST00000476932 MTX1Q13505 466 aa25.61■■□□□ 1.69
LIMS2-214ENST00000476932 USP42Q9H9J4 1324 aaKnown RBP25.61■■□□□ 1.69
LIMS2-214ENST00000476932 NPHP4O75161 1426 aaPredicted RBP25.6■■□□□ 1.69
LIMS2-214ENST00000476932 PROSER3Q2NL68 480 aa25.6■■□□□ 1.69
LIMS2-214ENST00000476932 CAVIN1Q6NZI2 390 aaKnown RBP25.6■■□□□ 1.69
LIMS2-214ENST00000476932 GPT2Q8TD30 523 aa25.6■■□□□ 1.69
LIMS2-214ENST00000476932 DBF4Q9UBU7 674 aaPredicted RBP25.6■■□□□ 1.69
LIMS2-214ENST00000476932 GIGYF1O75420 1035 aaPredicted RBP25.59■■□□□ 1.69
LIMS2-214ENST00000476932 ZSCAN23Q3MJ62 389 aa25.59■■□□□ 1.69
LIMS2-214ENST00000476932 ANKRD24Q8TF21 1146 aa25.59■■□□□ 1.69
LIMS2-214ENST00000476932 INTS4Q96HW7 963 aaKnown RBP25.59■■□□□ 1.69
LIMS2-214ENST00000476932 UPF3BQ9BZI7 483 aaKnown RBP25.59■■□□□ 1.69
LIMS2-214ENST00000476932 SGSM2O43147 1006 aa25.58■■□□□ 1.69
LIMS2-214ENST00000476932 PRPF40AO75400 957 aaKnown RBP25.58■■□□□ 1.69
LIMS2-214ENST00000476932 BRD1O95696 1058 aa25.58■■□□□ 1.69
LIMS2-214ENST00000476932 CLCN1P35523 988 aa25.58■■□□□ 1.69
LIMS2-214ENST00000476932 ERBB4Q15303 1308 aa25.58■■□□□ 1.69
LIMS2-214ENST00000476932 RAD50Q92878 1312 aa25.58■■□□□ 1.69
LIMS2-214ENST00000476932 C1orf141Q5JVX7 400 aa25.58■■□□□ 1.69
LIMS2-214ENST00000476932 AXIN2Q9Y2T1 843 aa25.57■■□□□ 1.68
LIMS2-214ENST00000476932 MAP3K2Q9Y2U5 619 aa25.57■■□□□ 1.68
LIMS2-214ENST00000476932 C5P01031 1676 aa25.57■■□□□ 1.68
LIMS2-214ENST00000476932 KIF1AQ12756 1690 aa25.57■■□□□ 1.68
LIMS2-214ENST00000476932 PRAMEF22A3QJZ6 481 aa25.56■■□□□ 1.68
LIMS2-214ENST00000476932 NOL8Q76FK4 1167 aaKnown RBP25.56■■□□□ 1.68
LIMS2-214ENST00000476932 ALS2Q96Q42 1657 aa25.56■■□□□ 1.68
LIMS2-214ENST00000476932 HSP90AB4PQ58FF6 505 aa25.56■■□□□ 1.68
LIMS2-214ENST00000476932 SCN11AQ9UI33 1791 aa25.55■■□□□ 1.68
LIMS2-214ENST00000476932 ALDH1L1O75891 902 aa25.55■■□□□ 1.68
LIMS2-214ENST00000476932 NASPP49321 788 aaPredicted RBP25.55■■□□□ 1.68
LIMS2-214ENST00000476932 LSG1Q9H089 658 aaKnown RBP25.55■■□□□ 1.68
LIMS2-214ENST00000476932 PLEKHG5O94827 1062 aa25.54■■□□□ 1.68
LIMS2-214ENST00000476932 NCLP19338 710 aaKnown RBP25.54■■□□□ 1.68
LIMS2-214ENST00000476932 FOXD4L5Q5VV16 416 aaPredicted RBP25.54■■□□□ 1.68
LIMS2-214ENST00000476932 KSR2Q6VAB6 950 aa25.54■■□□□ 1.68
LIMS2-214ENST00000476932 CNTROBQ8N137 903 aa25.54■■□□□ 1.68
LIMS2-214ENST00000476932 FOXD4L4Q8WXT5 416 aaPredicted RBP25.54■■□□□ 1.68
LIMS2-214ENST00000476932 TTC41PQ6P2S7 1318 aa25.54■■□□□ 1.68
LIMS2-214ENST00000476932 PPP1R9BQ96SB3 815 aa25.53■■□□□ 1.68
LIMS2-214ENST00000476932 RBM27Q9P2N5 1060 aaKnown RBP25.53■■□□□ 1.68
LIMS2-214ENST00000476932 MST1RQ04912 1400 aa25.52■■□□□ 1.68
LIMS2-214ENST00000476932 NSFL1CQ9UNZ2 370 aaKnown RBP25.52■■□□□ 1.68
LIMS2-214ENST00000476932 ESPNB1AK53 854 aa25.52■■□□□ 1.68
LIMS2-214ENST00000476932 CWF19L2Q2TBE0 894 aaKnown RBP25.52■■□□□ 1.68
LIMS2-214ENST00000476932 SNX14Q9Y5W7 946 aa25.52■■□□□ 1.68
LIMS2-214ENST00000476932 CCDC173Q0VFZ6 552 aa25.51■■□□□ 1.67
LIMS2-214ENST00000476932 TCHHQ07283 1943 aa25.5■■□□□ 1.67
LIMS2-214ENST00000476932 TTC14Q96N46 770 aa25.5■■□□□ 1.67
LIMS2-214ENST00000476932 TMEM63CQ9P1W3 806 aa25.5■■□□□ 1.67
LIMS2-214ENST00000476932 GLRX3O76003 335 aaKnown RBP25.49■■□□□ 1.67
LIMS2-214ENST00000476932 LMOD2Q6P5Q4 547 aa25.49■■□□□ 1.67
LIMS2-214ENST00000476932 RASEFQ8IZ41 740 aa25.49■■□□□ 1.67
LIMS2-214ENST00000476932 C9orf78Q9NZ63 289 aaPredicted RBP25.49■■□□□ 1.67
LIMS2-214ENST00000476932 OS9Q13438 667 aaPredicted RBP25.49■■□□□ 1.67
LIMS2-214ENST00000476932 PA2G4Q9UQ80 394 aaKnown RBP25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms