RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 CYP19A1P11511 503 aaPredicted RBP22.56■■□□□ 1.2
APOBEC3F-203ENST00000476513 HSPA1AP0DMV8 641 aaKnown RBP22.55■■□□□ 1.2
APOBEC3F-203ENST00000476513 HSPA1BP0DMV9 641 aaKnown RBP22.55■■□□□ 1.2
APOBEC3F-203ENST00000476513 NARFQ9UHQ1 456 aa22.55■■□□□ 1.2
APOBEC3F-203ENST00000476513 TTLL6Q8N841 843 aa22.54■■□□□ 1.2
APOBEC3F-203ENST00000476513 PANK3Q9H999 370 aa22.54■■□□□ 1.2
APOBEC3F-203ENST00000476513 SLC52A2Q9HAB3 445 aa22.54■■□□□ 1.2
APOBEC3F-203ENST00000476513 BCL2L12Q9HB09 334 aa22.54■■□□□ 1.2
APOBEC3F-203ENST00000476513 SERPINB2P05120 415 aa22.53■■□□□ 1.2
APOBEC3F-203ENST00000476513 AKAP4Q5JQC9 854 aa22.53■■□□□ 1.2
APOBEC3F-203ENST00000476513 COL15A1P39059 1388 aa22.52■■□□□ 1.2
APOBEC3F-203ENST00000476513 NFKBIEO00221 500 aa22.52■■□□□ 1.2
APOBEC3F-203ENST00000476513 SLC39A6Q13433 755 aa22.52■■□□□ 1.2
APOBEC3F-203ENST00000476513 MORC1Q86VD1 984 aa22.52■■□□□ 1.2
APOBEC3F-203ENST00000476513 C2CD5Q86YS7 1000 aa22.52■■□□□ 1.2
APOBEC3F-203ENST00000476513 LGR6Q9HBX8 967 aa22.52■■□□□ 1.2
APOBEC3F-203ENST00000476513 ZBTB1Q9Y2K1 713 aa22.52■■□□□ 1.2
APOBEC3F-203ENST00000476513 POTECB2RU33 542 aa22.51■■□□□ 1.19
APOBEC3F-203ENST00000476513 IL13P35225 146 aa22.51■■□□□ 1.19
APOBEC3F-203ENST00000476513 NRXN2Q9P2S2 1712 aa22.51■■□□□ 1.19
APOBEC3F-203ENST00000476513 SCN11AQ9UI33 1791 aa22.5■■□□□ 1.19
APOBEC3F-203ENST00000476513 AFDNP55196 1824 aaKnown RBP22.5■■□□□ 1.19
APOBEC3F-203ENST00000476513 CARMIL3Q8ND23 1372 aa22.5■■□□□ 1.19
APOBEC3F-203ENST00000476513 H0YIN7 160 aa22.49■■□□□ 1.19
APOBEC3F-203ENST00000476513 RNMTO43148 476 aaKnown RBP22.48■■□□□ 1.19
APOBEC3F-203ENST00000476513 TIMELESSQ9UNS1 1208 aa22.48■■□□□ 1.19
APOBEC3F-203ENST00000476513 PCNTO95613 3336 aa22.48■■□□□ 1.19
APOBEC3F-203ENST00000476513 DLEC1Q9Y238 1755 aa22.48■■□□□ 1.19
APOBEC3F-203ENST00000476513 MRC1P22897 1456 aa22.47■■□□□ 1.19
APOBEC3F-203ENST00000476513 DPY19L2Q6NUT2 758 aa22.46■■□□□ 1.19
APOBEC3F-203ENST00000476513 TIAM2Q8IVF5 1701 aa22.45■■□□□ 1.19
APOBEC3F-203ENST00000476513 BICDL1Q6ZP65 573 aa22.45■■□□□ 1.18
APOBEC3F-203ENST00000476513 VSIG10Q8N0Z9 540 aa22.45■■□□□ 1.18
APOBEC3F-203ENST00000476513 CANXP27824 592 aaKnown RBP22.44■■□□□ 1.18
APOBEC3F-203ENST00000476513 ZNF622Q969S3 477 aaKnown RBP eCLIP22.43■■□□□ 1.18
APOBEC3F-203ENST00000476513 ERFEQ4G0M1 354 aa22.42■■□□□ 1.18
APOBEC3F-203ENST00000476513 ZNF219Q9P2Y4 722 aaPredicted RBP22.42■■□□□ 1.18
APOBEC3F-203ENST00000476513 C21orf2O43822 256 aa22.41■■□□□ 1.18
APOBEC3F-203ENST00000476513 EIF5P55010 431 aaKnown RBP22.41■■□□□ 1.18
APOBEC3F-203ENST00000476513 HMOX1P09601 288 aa22.4■■□□□ 1.18
APOBEC3F-203ENST00000476513 HSPA5P11021 654 aaKnown RBP22.4■■□□□ 1.18
APOBEC3F-203ENST00000476513 EIF4G2P78344 907 aaKnown RBP eCLIP22.4■■□□□ 1.18
APOBEC3F-203ENST00000476513 MTHFSDQ2M296 383 aaKnown RBP22.4■■□□□ 1.18
APOBEC3F-203ENST00000476513 TBC1D9BQ66K14 1250 aa22.4■■□□□ 1.18
APOBEC3F-203ENST00000476513 BRIP1Q9BX63 1249 aa22.4■■□□□ 1.18
APOBEC3F-203ENST00000476513 CREBZFQ9NS37 354 aa22.4■■□□□ 1.18
APOBEC3F-203ENST00000476513 CCDC88AQ3V6T2 1871 aa22.4■■□□□ 1.18
APOBEC3F-203ENST00000476513 A0A087WZG4 1122 aa22.39■■□□□ 1.17
APOBEC3F-203ENST00000476513 STARD3NLO95772 234 aa22.39■■□□□ 1.17
APOBEC3F-203ENST00000476513 PDE6BP35913 854 aa22.39■■□□□ 1.17
APOBEC3F-203ENST00000476513 CHADLQ6NUI6 762 aa22.39■■□□□ 1.17
APOBEC3F-203ENST00000476513 MKRN1Q9UHC7 482 aaKnown RBP22.39■■□□□ 1.17
APOBEC3F-203ENST00000476513 PDZRN3Q9UPQ7 1066 aa22.39■■□□□ 1.17
APOBEC3F-203ENST00000476513 KNSTRNQ9Y448 316 aa22.39■■□□□ 1.17
APOBEC3F-203ENST00000476513 POTEIP0CG38 1075 aa22.38■■□□□ 1.17
APOBEC3F-203ENST00000476513 POTEJP0CG39 1038 aa22.38■■□□□ 1.17
APOBEC3F-203ENST00000476513 PRR5LQ6MZQ0 368 aa22.38■■□□□ 1.17
APOBEC3F-203ENST00000476513 CCDC24Q8N4L8 307 aa22.38■■□□□ 1.17
APOBEC3F-203ENST00000476513 LTBP3Q9NS15 1303 aa22.36■■□□□ 1.17
APOBEC3F-203ENST00000476513 DDNO94850 711 aaPredicted RBP22.36■■□□□ 1.17
APOBEC3F-203ENST00000476513 ANKRD31Q8N7Z5 1873 aa22.36■■□□□ 1.17
APOBEC3F-203ENST00000476513 TTC5Q8N0Z6 440 aa22.35■■□□□ 1.17
APOBEC3F-203ENST00000476513 TAOK3Q9H2K8 898 aa22.35■■□□□ 1.17
APOBEC3F-203ENST00000476513 AMER1Q5JTC6 1135 aaPredicted RBP22.34■■□□□ 1.17
APOBEC3F-203ENST00000476513 ZNF496Q96IT1 587 aaPredicted RBP22.34■■□□□ 1.17
APOBEC3F-203ENST00000476513 TBC1D2BQ9UPU7 963 aa22.34■■□□□ 1.17
APOBEC3F-203ENST00000476513 UBR2Q8IWV8 1755 aa22.34■■□□□ 1.17
APOBEC3F-203ENST00000476513 FER1L6Q2WGJ9 1857 aa22.33■■□□□ 1.17
APOBEC3F-203ENST00000476513 ZNF330Q9Y3S2 320 aaPredicted RBP22.33■■□□□ 1.17
APOBEC3F-203ENST00000476513 COL11A2P13942 1736 aaPredicted RBP22.33■■□□□ 1.17
APOBEC3F-203ENST00000476513 FOXN1O15353 648 aa22.32■■□□□ 1.16
APOBEC3F-203ENST00000476513 DICER1Q9UPY3 1922 aaKnown RBP22.31■■□□□ 1.16
APOBEC3F-203ENST00000476513 CNTNAP1P78357 1384 aa22.31■■□□□ 1.16
APOBEC3F-203ENST00000476513 HEG1Q9ULI3 1381 aa22.31■■□□□ 1.16
APOBEC3F-203ENST00000476513 TRIM26Q12899 539 aaPredicted RBP22.31■■□□□ 1.16
APOBEC3F-203ENST00000476513 STYK1Q6J9G0 422 aa22.31■■□□□ 1.16
APOBEC3F-203ENST00000476513 PRPF40BQ6NWY9 871 aaKnown RBP22.31■■□□□ 1.16
APOBEC3F-203ENST00000476513 CNKSR1Q969H4 720 aa22.31■■□□□ 1.16
APOBEC3F-203ENST00000476513 SCN7AQ01118 1682 aa22.3■■□□□ 1.16
APOBEC3F-203ENST00000476513 SRGNP10124 158 aa22.3■■□□□ 1.16
APOBEC3F-203ENST00000476513 ZNF790Q6PG37 636 aa22.3■■□□□ 1.16
APOBEC3F-203ENST00000476513 CNBD1Q8NA66 436 aa22.3■■□□□ 1.16
APOBEC3F-203ENST00000476513 SETDB2Q96T68 719 aa22.3■■□□□ 1.16
APOBEC3F-203ENST00000476513 TEX13AQ9BXU3 409 aaPredicted RBP22.3■■□□□ 1.16
APOBEC3F-203ENST00000476513 PASKQ96RG2 1323 aa22.3■■□□□ 1.16
APOBEC3F-203ENST00000476513 VIRMAQ69YN4 1812 aaKnown RBP22.29■■□□□ 1.16
APOBEC3F-203ENST00000476513 DIAPH1O60610 1272 aaKnown RBP22.29■■□□□ 1.16
APOBEC3F-203ENST00000476513 IL6STP40189 918 aaPredicted RBP22.29■■□□□ 1.16
APOBEC3F-203ENST00000476513 CAMTA2O94983 1202 aa22.28■■□□□ 1.16
APOBEC3F-203ENST00000476513 A1BGP04217 495 aa22.28■■□□□ 1.16
APOBEC3F-203ENST00000476513 SOGA3Q5TF21 947 aa22.28■■□□□ 1.16
APOBEC3F-203ENST00000476513 LDHDQ86WU2 507 aa22.28■■□□□ 1.16
APOBEC3F-203ENST00000476513 IL17REQ8NFR9 667 aa22.28■■□□□ 1.16
APOBEC3F-203ENST00000476513 MASTLQ96GX5 879 aa22.28■■□□□ 1.16
APOBEC3F-203ENST00000476513 L3MBTL3Q96JM7 780 aaPredicted RBP22.28■■□□□ 1.16
APOBEC3F-203ENST00000476513 PRDM10Q9NQV6 1147 aa22.28■■□□□ 1.16
APOBEC3F-203ENST00000476513 IQCA1LA6NCM1 817 aa22.27■■□□□ 1.16
APOBEC3F-203ENST00000476513 NPHP1O15259 732 aa22.27■■□□□ 1.16
APOBEC3F-203ENST00000476513 ST5P78524 1137 aa22.27■■□□□ 1.16
APOBEC3F-203ENST00000476513 TEFQ10587 303 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms