RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 KSR2Q6VAB6 950 aa19.05■□□□□ 0.64
RPUSD3-215ENST00000475470 STRN4Q9NRL3 753 aa19.05■□□□□ 0.64
RPUSD3-215ENST00000475470 GSPT1P15170 499 aaKnown RBP19.04■□□□□ 0.64
RPUSD3-215ENST00000475470 ZCRB1Q8TBF4 217 aaKnown RBP19.04■□□□□ 0.64
RPUSD3-215ENST00000475470 OTUD7AQ8TE49 926 aaPredicted RBP19.04■□□□□ 0.64
RPUSD3-215ENST00000475470 MAP3K2Q9Y2U5 619 aa19.04■□□□□ 0.64
RPUSD3-215ENST00000475470 PARP4Q9UKK3 1724 aaKnown RBP19.04■□□□□ 0.64
RPUSD3-215ENST00000475470 MRC1P22897 1456 aa19.04■□□□□ 0.64
RPUSD3-215ENST00000475470 CARD10Q9BWT7 1032 aa19.04■□□□□ 0.64
RPUSD3-215ENST00000475470 PCDH11XQ9BZA7 1347 aa19.04■□□□□ 0.64
RPUSD3-215ENST00000475470 PCDH11YQ9BZA8 1340 aa19.04■□□□□ 0.64
RPUSD3-215ENST00000475470 ZNF496Q96IT1 587 aaPredicted RBP19.03■□□□□ 0.64
RPUSD3-215ENST00000475470 CDC45O75419 566 aa19.03■□□□□ 0.64
RPUSD3-215ENST00000475470 DDX58O95786 925 aaKnown RBP19.03■□□□□ 0.64
RPUSD3-215ENST00000475470 TBC1D9Q6ZT07 1266 aa19.03■□□□□ 0.64
RPUSD3-215ENST00000475470 NBPF7P0C2Y1 421 aaPredicted RBP19.02■□□□□ 0.64
RPUSD3-215ENST00000475470 IL2RBP14784 551 aa19.02■□□□□ 0.64
RPUSD3-215ENST00000475470 LRRCC1Q9C099 1032 aa19.02■□□□□ 0.64
RPUSD3-215ENST00000475470 FMNL2Q96PY5 1086 aa19.02■□□□□ 0.63
RPUSD3-215ENST00000475470 SNRPA1P09661 255 aaKnown RBP19.01■□□□□ 0.63
RPUSD3-215ENST00000475470 AIMP1Q12904 312 aaKnown RBP19.01■□□□□ 0.63
RPUSD3-215ENST00000475470 PDIA6Q15084 440 aa19.01■□□□□ 0.63
RPUSD3-215ENST00000475470 LARP1Q6PKG0 1096 aaKnown RBP19.01■□□□□ 0.63
RPUSD3-215ENST00000475470 ALDH1L1O75891 902 aa19.01■□□□□ 0.63
RPUSD3-215ENST00000475470 SSH3Q8TE77 659 aa19.01■□□□□ 0.63
RPUSD3-215ENST00000475470 C5P01031 1676 aa19■□□□□ 0.63
RPUSD3-215ENST00000475470 PPP1R42Q7Z4L9 355 aa19■□□□□ 0.63
RPUSD3-215ENST00000475470 IBTKQ9P2D0 1353 aaPredicted RBP19■□□□□ 0.63
RPUSD3-215ENST00000475470 MYL6BP14649 208 aa19■□□□□ 0.63
RPUSD3-215ENST00000475470 C9orf78Q9NZ63 289 aaPredicted RBP18.99■□□□□ 0.63
RPUSD3-215ENST00000475470 SRGAP3O43295 1099 aa18.98■□□□□ 0.63
RPUSD3-215ENST00000475470 EIF5BO60841 1220 aaKnown RBP18.98■□□□□ 0.63
RPUSD3-215ENST00000475470 RBM25P49756 843 aaKnown RBP18.98■□□□□ 0.63
RPUSD3-215ENST00000475470 USP16Q9Y5T5 823 aa18.98■□□□□ 0.63
RPUSD3-215ENST00000475470 PDE1AP54750 535 aa18.98■□□□□ 0.63
RPUSD3-215ENST00000475470 POLA2Q14181 598 aa18.98■□□□□ 0.63
RPUSD3-215ENST00000475470 RIC3Q7Z5B4 369 aa18.98■□□□□ 0.63
RPUSD3-215ENST00000475470 LINS1Q8NG48 757 aa18.98■□□□□ 0.63
RPUSD3-215ENST00000475470 OSBPL3Q9H4L5 887 aa18.98■□□□□ 0.63
RPUSD3-215ENST00000475470 HDAC5Q9UQL6 1122 aa18.98■□□□□ 0.63
RPUSD3-215ENST00000475470 SDSP20132 328 aa18.97■□□□□ 0.63
RPUSD3-215ENST00000475470 CWF19L2Q2TBE0 894 aaKnown RBP18.97■□□□□ 0.63
RPUSD3-215ENST00000475470 DDX54Q8TDD1 881 aaKnown RBP18.97■□□□□ 0.63
RPUSD3-215ENST00000475470 ERVV-2B6SEH9 535 aa18.96■□□□□ 0.63
RPUSD3-215ENST00000475470 SURF6O75683 361 aaKnown RBP18.96■□□□□ 0.63
RPUSD3-215ENST00000475470 XAGE3Q8WTP9 111 aa18.96■□□□□ 0.63
RPUSD3-215ENST00000475470 RAB11FIP3O75154 756 aa18.95■□□□□ 0.62
RPUSD3-215ENST00000475470 NKX1-1Q15270 411 aaPredicted RBP18.95■□□□□ 0.62
RPUSD3-215ENST00000475470 TBC1D2Q9BYX2 928 aa18.95■□□□□ 0.62
RPUSD3-215ENST00000475470 USP35Q9P2H5 1018 aa18.95■□□□□ 0.62
RPUSD3-215ENST00000475470 CASC1Q6TDU7 716 aa18.95■□□□□ 0.62
RPUSD3-215ENST00000475470 COPS6Q7L5N1 327 aa18.95■□□□□ 0.62
RPUSD3-215ENST00000475470 BTG4Q9NY30 223 aa18.95■□□□□ 0.62
RPUSD3-215ENST00000475470 MX1P20591 662 aa18.94■□□□□ 0.62
RPUSD3-215ENST00000475470 NEXNQ0ZGT2 675 aa18.94■□□□□ 0.62
RPUSD3-215ENST00000475470 RTL5Q5HYW3 569 aaPredicted RBP18.94■□□□□ 0.62
RPUSD3-215ENST00000475470 ROBO1Q9Y6N7 1651 aa18.93■□□□□ 0.62
RPUSD3-215ENST00000475470 GRM8O00222 908 aa18.93■□□□□ 0.62
RPUSD3-215ENST00000475470 SALL3Q9BXA9 1300 aa18.93■□□□□ 0.62
RPUSD3-215ENST00000475470 PIP4K2AP48426 406 aaPredicted RBP18.92■□□□□ 0.62
RPUSD3-215ENST00000475470 MTX1Q13505 466 aa18.92■□□□□ 0.62
RPUSD3-215ENST00000475470 HSP90AB4PQ58FF6 505 aa18.92■□□□□ 0.62
RPUSD3-215ENST00000475470 ANKRD13DQ6ZTN6 518 aa18.92■□□□□ 0.62
RPUSD3-215ENST00000475470 IL1RAPL2Q9NP60 686 aa18.92■□□□□ 0.62
RPUSD3-215ENST00000475470 RHPN1Q8TCX5 695 aa18.91■□□□□ 0.62
RPUSD3-215ENST00000475470 TSHZ3Q63HK5 1081 aa18.91■□□□□ 0.62
RPUSD3-215ENST00000475470 LRP10Q7Z4F1 713 aa18.91■□□□□ 0.62
RPUSD3-215ENST00000475470 KIF1BPQ96EK5 621 aa18.91■□□□□ 0.62
RPUSD3-215ENST00000475470 METTL22Q9BUU2 404 aaPredicted RBP18.91■□□□□ 0.62
RPUSD3-215ENST00000475470 UTYO14607 1347 aa18.9■□□□□ 0.62
RPUSD3-215ENST00000475470 IGKV5-2P06315 115 aa18.9■□□□□ 0.62
RPUSD3-215ENST00000475470 MYD88Q99836 296 aa18.9■□□□□ 0.62
RPUSD3-215ENST00000475470 SHANK3Q9BYB0 1731 aa18.9■□□□□ 0.62
RPUSD3-215ENST00000475470 STAP2Q9UGK3 403 aa18.9■□□□□ 0.62
RPUSD3-215ENST00000475470 NEURL1BA8MQ27 555 aa18.89■□□□□ 0.61
RPUSD3-215ENST00000475470 LAMB4A4D0S4 1761 aa18.89■□□□□ 0.61
RPUSD3-215ENST00000475470 OS9Q13438 667 aaPredicted RBP18.89■□□□□ 0.61
RPUSD3-215ENST00000475470 HSCBQ8IWL3 235 aa18.89■□□□□ 0.61
RPUSD3-215ENST00000475470 AHDC1Q5TGY3 1603 aaPredicted RBP18.89■□□□□ 0.61
RPUSD3-215ENST00000475470 SUCLG2Q96I99 432 aa18.88■□□□□ 0.61
RPUSD3-215ENST00000475470 COL14A1Q05707 1796 aaKnown RBP18.88■□□□□ 0.61
RPUSD3-215ENST00000475470 GLI3P10071 1580 aa18.88■□□□□ 0.61
RPUSD3-215ENST00000475470 ERBB4Q15303 1308 aa18.88■□□□□ 0.61
RPUSD3-215ENST00000475470 DEKP35659 375 aaKnown RBP18.88■□□□□ 0.61
RPUSD3-215ENST00000475470 GCKRQ14397 625 aa18.88■□□□□ 0.61
RPUSD3-215ENST00000475470 NUTM1Q86Y26 1132 aa18.88■□□□□ 0.61
RPUSD3-215ENST00000475470 SLKQ9H2G2 1235 aaPredicted RBP18.88■□□□□ 0.61
RPUSD3-215ENST00000475470 AOX1Q06278 1338 aa18.87■□□□□ 0.61
RPUSD3-215ENST00000475470 PTCD1O75127 700 aaKnown RBP18.87■□□□□ 0.61
RPUSD3-215ENST00000475470 TMOD3Q9NYL9 352 aa18.86■□□□□ 0.61
RPUSD3-215ENST00000475470 UBR2Q8IWV8 1755 aa18.86■□□□□ 0.61
RPUSD3-215ENST00000475470 TRIM6-TRIM34B2RNG4 842 aa18.86■□□□□ 0.61
RPUSD3-215ENST00000475470 KIF2CQ99661 725 aa18.86■□□□□ 0.61
RPUSD3-215ENST00000475470 BICC1Q9H694 974 aaKnown RBP18.86■□□□□ 0.61
RPUSD3-215ENST00000475470 KAZALD1Q96I82 304 aa18.85■□□□□ 0.61
RPUSD3-215ENST00000475470 KCPQ6ZWJ8 1503 aa18.85■□□□□ 0.61
RPUSD3-215ENST00000475470 REC8O95072 547 aa18.85■□□□□ 0.61
RPUSD3-215ENST00000475470 PLBD2Q8NHP8 589 aa18.85■□□□□ 0.61
RPUSD3-215ENST00000475470 SNX21Q969T3 373 aa18.85■□□□□ 0.61
RPUSD3-215ENST00000475470 RILPL2Q969X0 211 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms