RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 CBX1P83916 185 aa5.91□□□□□ -1.46
NPHP3-206ENST00000474871 TBC1D8BQ0IIM8 1120 aa5.91□□□□□ -1.46
NPHP3-206ENST00000474871 LONRF1Q17RB8 773 aa5.91□□□□□ -1.46
NPHP3-206ENST00000474871 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.91□□□□□ -1.46
NPHP3-206ENST00000474871 SPRYD3Q8NCJ5 442 aa5.91□□□□□ -1.46
NPHP3-206ENST00000474871 PMFBP1Q8TBY8 1022 aa5.91□□□□□ -1.46
NPHP3-206ENST00000474871 ZC3H15Q8WU90 426 aaKnown RBP5.91□□□□□ -1.46
NPHP3-206ENST00000474871 TIGD1Q96MW7 591 aa5.91□□□□□ -1.46
NPHP3-206ENST00000474871 MPHOSPH9Q99550 1183 aa5.91□□□□□ -1.46
NPHP3-206ENST00000474871 SPOCK3Q9BQ16 436 aa5.91□□□□□ -1.46
NPHP3-206ENST00000474871 LMCD1Q9NZU5 365 aa5.91□□□□□ -1.46
NPHP3-206ENST00000474871 DDX49Q9Y6V7 483 aaKnown RBP5.91□□□□□ -1.46
NPHP3-206ENST00000474871 SBNO2Q9Y2G9 1366 aa5.91□□□□□ -1.46
NPHP3-206ENST00000474871 UNC13BO14795 1591 aa5.91□□□□□ -1.46
NPHP3-206ENST00000474871 ANKRD50Q9ULJ7 1429 aa5.91□□□□□ -1.46
NPHP3-206ENST00000474871 BTF3P20290 206 aaKnown RBP5.91□□□□□ -1.46
NPHP3-206ENST00000474871 RPAINQ86UA6 219 aa5.91□□□□□ -1.46
NPHP3-206ENST00000474871 SAMD3Q8N6K7 520 aa5.91□□□□□ -1.46
NPHP3-206ENST00000474871 TBC1D5Q92609 795 aa5.91□□□□□ -1.46
NPHP3-206ENST00000474871 GABBR1Q9UBS5 961 aa5.91□□□□□ -1.46
NPHP3-206ENST00000474871 GTF2A1P52655 376 aaPredicted RBP5.9□□□□□ -1.46
NPHP3-206ENST00000474871 LMOD2Q6P5Q4 547 aa5.9□□□□□ -1.46
NPHP3-206ENST00000474871 ERCC4Q92889 916 aaPredicted RBP5.9□□□□□ -1.46
NPHP3-206ENST00000474871 CLUAP1Q96AJ1 413 aa5.9□□□□□ -1.46
NPHP3-206ENST00000474871 PPP1R1BQ9UD71 204 aaPredicted RBP5.9□□□□□ -1.46
NPHP3-206ENST00000474871 SSUH2Q9Y2M2 353 aa5.9□□□□□ -1.46
NPHP3-206ENST00000474871 N6AMT1Q9Y5N5 214 aa5.9□□□□□ -1.46
NPHP3-206ENST00000474871 COMMD10Q9Y6G5 202 aa5.9□□□□□ -1.46
NPHP3-206ENST00000474871 TONSLQ96HA7 1378 aa5.9□□□□□ -1.46
NPHP3-206ENST00000474871 HTATSF1O43719 755 aaKnown RBP5.9□□□□□ -1.46
NPHP3-206ENST00000474871 TRAK2O60296 914 aa5.9□□□□□ -1.46
NPHP3-206ENST00000474871 STIP1P31948 543 aaKnown RBP5.9□□□□□ -1.46
NPHP3-206ENST00000474871 CCBE1Q6UXH8 406 aaPredicted RBP5.9□□□□□ -1.46
NPHP3-206ENST00000474871 RMI1Q9H9A7 625 aa5.9□□□□□ -1.46
NPHP3-206ENST00000474871 PPP4R2Q9NY27 417 aa5.9□□□□□ -1.46
NPHP3-206ENST00000474871 DIS3Q9Y2L1 958 aaKnown RBP5.9□□□□□ -1.46
NPHP3-206ENST00000474871 CCDC196A0A1B0GTZ2 297 aa5.9□□□□□ -1.47
NPHP3-206ENST00000474871 SMARCA1P28370 1054 aa5.9□□□□□ -1.47
NPHP3-206ENST00000474871 HNRNPMP52272 730 aaKnown RBP eCLIP5.9□□□□□ -1.47
NPHP3-206ENST00000474871 CCDC70Q6NSX1 233 aa5.9□□□□□ -1.47
NPHP3-206ENST00000474871 C16orf87Q6PH81 154 aa5.9□□□□□ -1.47
NPHP3-206ENST00000474871 C1orf131Q8NDD1 294 aaKnown RBP5.9□□□□□ -1.47
NPHP3-206ENST00000474871 NUCKS1Q9H1E3 243 aaKnown RBP5.9□□□□□ -1.47
NPHP3-206ENST00000474871 TRPV5Q9NQA5 729 aa5.9□□□□□ -1.47
NPHP3-206ENST00000474871 GLI2P10070 1586 aa5.9□□□□□ -1.47
NPHP3-206ENST00000474871 ZNF24P17028 368 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 TRDNQ13061 729 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 THEMISQ8N1K5 641 aaPredicted RBP5.89□□□□□ -1.47
NPHP3-206ENST00000474871 ANKK1Q8NFD2 765 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 SVIPQ8NHG7 77 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 UHMK1Q8TAS1 419 aaKnown RBP5.89□□□□□ -1.47
NPHP3-206ENST00000474871 KCNB2Q92953 911 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 POLR3CQ9BUI4 534 aaPredicted RBP5.89□□□□□ -1.47
NPHP3-206ENST00000474871 LRRC27Q9C0I9 530 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 TMEM98Q9Y2Y6 226 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 ZSCAN9O15535 394 aaPredicted RBP5.89□□□□□ -1.47
NPHP3-206ENST00000474871 NEFHP12036 1026 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 ADCY2Q08462 1091 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 ZNF394Q53GI3 561 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 METTL14Q9HCE5 456 aaKnown RBP5.89□□□□□ -1.47
NPHP3-206ENST00000474871 ANKRD30BQ9BXX2 1392 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 KIF15Q9NS87 1388 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 RPRD2Q5VT52 1461 aaKnown RBP5.89□□□□□ -1.47
NPHP3-206ENST00000474871 ECM2O94769 699 aaPredicted RBP5.89□□□□□ -1.47
NPHP3-206ENST00000474871 TPM3P06753 285 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 ABL2P42684 1182 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 TBC1D10BQ4KMP7 808 aaPredicted RBP5.89□□□□□ -1.47
NPHP3-206ENST00000474871 CCDC178Q5BJE1 867 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 SFMBT2Q5VUG0 894 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 DHRS1Q96LJ7 313 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 SLC26A8Q96RN1 970 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 F8VZ95 297 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 RAD51AP2Q09MP3 1159 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 FXNQ16595 210 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 PCGF5Q86SE9 256 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 GPT2Q8TD30 523 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 NACC2Q96BF6 587 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 RSPH14Q9UHP6 348 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 TMEM94Q12767 1356 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 NINLQ9Y2I6 1382 aa5.89□□□□□ -1.47
NPHP3-206ENST00000474871 ASXL2Q76L83 1435 aa5.88□□□□□ -1.47
NPHP3-206ENST00000474871 FCHSD2O94868 740 aa5.88□□□□□ -1.47
NPHP3-206ENST00000474871 VDRP11473 427 aa5.88□□□□□ -1.47
NPHP3-206ENST00000474871 HDGFP51858 240 aaKnown RBP5.88□□□□□ -1.47
NPHP3-206ENST00000474871 C1QBPQ07021 282 aaKnown RBP5.88□□□□□ -1.47
NPHP3-206ENST00000474871 GRIK3Q13003 919 aa5.88□□□□□ -1.47
NPHP3-206ENST00000474871 NGDNQ8NEJ9 315 aaKnown RBP5.88□□□□□ -1.47
NPHP3-206ENST00000474871 FBXW7Q969H0 707 aa5.88□□□□□ -1.47
NPHP3-206ENST00000474871 SLC35B4Q969S0 331 aa5.88□□□□□ -1.47
NPHP3-206ENST00000474871 ZFYVE16Q7Z3T8 1539 aa5.88□□□□□ -1.47
NPHP3-206ENST00000474871 MYSM1Q5VVJ2 828 aa5.88□□□□□ -1.47
NPHP3-206ENST00000474871 TMEM63CQ9P1W3 806 aa5.88□□□□□ -1.47
NPHP3-206ENST00000474871 POLKQ9UBT6 870 aa5.88□□□□□ -1.47
NPHP3-206ENST00000474871 MORC2Q9Y6X9 1032 aaPredicted RBP5.88□□□□□ -1.47
NPHP3-206ENST00000474871 TPPPO94811 219 aa5.88□□□□□ -1.47
NPHP3-206ENST00000474871 PSMC1P62191 440 aaKnown RBP5.88□□□□□ -1.47
NPHP3-206ENST00000474871 NSUN2Q08J23 767 aaKnown RBP eCLIP5.88□□□□□ -1.47
NPHP3-206ENST00000474871 SMCR8Q8TEV9 937 aaPredicted RBP5.88□□□□□ -1.47
NPHP3-206ENST00000474871 INO80Q9ULG1 1556 aaPredicted RBP5.88□□□□□ -1.47
NPHP3-206ENST00000474871 DUOX2Q9NRD8 1548 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms