RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 POTEIP0CG38 1075 aa22.5■■□□□ 1.19
HPS4-210ENST00000473782 POTEJP0CG39 1038 aa22.5■■□□□ 1.19
HPS4-210ENST00000473782 PLEKHO1Q53GL0 409 aaPredicted RBP22.5■■□□□ 1.19
HPS4-210ENST00000473782 ZNF530Q6P9A1 599 aaPredicted RBP22.5■■□□□ 1.19
HPS4-210ENST00000473782 TTLL6Q8N841 843 aa22.5■■□□□ 1.19
HPS4-210ENST00000473782 SOS1Q07889 1333 aaPredicted RBP22.5■■□□□ 1.19
HPS4-210ENST00000473782 DLEC1Q9Y238 1755 aa22.49■■□□□ 1.19
HPS4-210ENST00000473782 PRDM10Q9NQV6 1147 aa22.49■■□□□ 1.19
HPS4-210ENST00000473782 CARMIL3Q8ND23 1372 aa22.49■■□□□ 1.19
HPS4-210ENST00000473782 CCDC88AQ3V6T2 1871 aa22.48■■□□□ 1.19
HPS4-210ENST00000473782 MTHFSP49914 203 aa22.48■■□□□ 1.19
HPS4-210ENST00000473782 DNAJC10Q8IXB1 793 aa22.48■■□□□ 1.19
HPS4-210ENST00000473782 ZPR1O75312 459 aa22.47■■□□□ 1.19
HPS4-210ENST00000473782 SERPINB2P05120 415 aa22.46■■□□□ 1.19
HPS4-210ENST00000473782 CDCA8Q53HL2 280 aa22.46■■□□□ 1.19
HPS4-210ENST00000473782 CHADLQ6NUI6 762 aa22.46■■□□□ 1.19
HPS4-210ENST00000473782 AEBP1Q8IUX7 1158 aa22.46■■□□□ 1.19
HPS4-210ENST00000473782 NARFQ9UHQ1 456 aa22.46■■□□□ 1.19
HPS4-210ENST00000473782 CNTNAP1P78357 1384 aa22.46■■□□□ 1.19
HPS4-210ENST00000473782 AMOTQ4VCS5 1084 aa22.45■■□□□ 1.18
HPS4-210ENST00000473782 C2CD5Q86YS7 1000 aa22.45■■□□□ 1.18
HPS4-210ENST00000473782 CYP19A1P11511 503 aaPredicted RBP22.44■■□□□ 1.18
HPS4-210ENST00000473782 TNNT2P45379 298 aaPredicted RBP22.44■■□□□ 1.18
HPS4-210ENST00000473782 PASKQ96RG2 1323 aa22.44■■□□□ 1.18
HPS4-210ENST00000473782 DPY19L2Q6NUT2 758 aa22.43■■□□□ 1.18
HPS4-210ENST00000473782 ERFEQ4G0M1 354 aa22.41■■□□□ 1.18
HPS4-210ENST00000473782 ZBTB1Q9Y2K1 713 aa22.41■■□□□ 1.18
HPS4-210ENST00000473782 COL15A1P39059 1388 aa22.4■■□□□ 1.18
HPS4-210ENST00000473782 H0YIN7 160 aa22.4■■□□□ 1.18
HPS4-210ENST00000473782 DDNO94850 711 aaPredicted RBP22.4■■□□□ 1.18
HPS4-210ENST00000473782 VEGFBP49765 207 aa22.4■■□□□ 1.18
HPS4-210ENST00000473782 CTCFP49711 727 aaPredicted RBP22.39■■□□□ 1.17
HPS4-210ENST00000473782 WBP1LQ9NX94 342 aa22.39■■□□□ 1.17
HPS4-210ENST00000473782 C21orf2O43822 256 aa22.38■■□□□ 1.17
HPS4-210ENST00000473782 C1orf141Q5JVX7 400 aa22.38■■□□□ 1.17
HPS4-210ENST00000473782 LGR6Q9HBX8 967 aa22.38■■□□□ 1.17
HPS4-210ENST00000473782 FER1L6Q2WGJ9 1857 aa22.38■■□□□ 1.17
HPS4-210ENST00000473782 DICER1Q9UPY3 1922 aaKnown RBP22.37■■□□□ 1.17
HPS4-210ENST00000473782 SLC39A6Q13433 755 aa22.37■■□□□ 1.17
HPS4-210ENST00000473782 LTBP3Q9NS15 1303 aa22.36■■□□□ 1.17
HPS4-210ENST00000473782 ITGBL1O95965 494 aaPredicted RBP22.36■■□□□ 1.17
HPS4-210ENST00000473782 LBX1P52954 281 aa22.36■■□□□ 1.17
HPS4-210ENST00000473782 FAM161AQ3B820 660 aa22.36■■□□□ 1.17
HPS4-210ENST00000473782 SLC52A2Q9HAB3 445 aa22.36■■□□□ 1.17
HPS4-210ENST00000473782 ANKRD31Q8N7Z5 1873 aa22.36■■□□□ 1.17
HPS4-210ENST00000473782 SCN11AQ9UI33 1791 aa22.35■■□□□ 1.17
HPS4-210ENST00000473782 ZNF219Q9P2Y4 722 aaPredicted RBP22.35■■□□□ 1.17
HPS4-210ENST00000473782 ZNF622Q969S3 477 aaKnown RBP eCLIP22.34■■□□□ 1.174e-6■■□□□ 13.5
HPS4-210ENST00000473782 ABHD8Q96I13 439 aa22.34■■□□□ 1.17
HPS4-210ENST00000473782 BICDL1Q6ZP65 573 aa22.33■■□□□ 1.17
HPS4-210ENST00000473782 CCDC24Q8N4L8 307 aa22.33■■□□□ 1.17
HPS4-210ENST00000473782 VIRMAQ69YN4 1812 aaKnown RBP22.33■■□□□ 1.16
HPS4-210ENST00000473782 COL11A2P13942 1736 aaPredicted RBP22.32■■□□□ 1.16
HPS4-210ENST00000473782 HSPA8P11142 646 aaKnown RBP22.32■■□□□ 1.16
HPS4-210ENST00000473782 TBC1D9BQ66K14 1250 aa22.32■■□□□ 1.16
HPS4-210ENST00000473782 SULT6B1Q6IMI4 303 aa22.32■■□□□ 1.16
HPS4-210ENST00000473782 LDHDQ86WU2 507 aa22.32■■□□□ 1.16
HPS4-210ENST00000473782 L3MBTL3Q96JM7 780 aaPredicted RBP22.32■■□□□ 1.16
HPS4-210ENST00000473782 BRIP1Q9BX63 1249 aa22.32■■□□□ 1.16
HPS4-210ENST00000473782 TAF1DQ9H5J8 278 aaPredicted RBP22.32■■□□□ 1.16
HPS4-210ENST00000473782 MRC1P22897 1456 aa22.32■■□□□ 1.16
HPS4-210ENST00000473782 EIF5P55010 431 aaKnown RBP22.31■■□□□ 1.16
HPS4-210ENST00000473782 PRR5LQ6MZQ0 368 aa22.31■■□□□ 1.16
HPS4-210ENST00000473782 AIDAQ96BJ3 306 aa22.31■■□□□ 1.16
HPS4-210ENST00000473782 TAOK3Q9H2K8 898 aa22.31■■□□□ 1.16
HPS4-210ENST00000473782 TMEM88BA6NKF7 163 aa22.3■■□□□ 1.16
HPS4-210ENST00000473782 AKAP4Q5JQC9 854 aa22.3■■□□□ 1.16
HPS4-210ENST00000473782 RNMTO43148 476 aaKnown RBP22.29■■□□□ 1.16
HPS4-210ENST00000473782 IL13P35225 146 aa22.29■■□□□ 1.16
HPS4-210ENST00000473782 CANXP27824 592 aaKnown RBP22.28■■□□□ 1.16
HPS4-210ENST00000473782 PDE6BP35913 854 aa22.28■■□□□ 1.16
HPS4-210ENST00000473782 VSIG10Q8N0Z9 540 aa22.28■■□□□ 1.16
HPS4-210ENST00000473782 PDZRN3Q9UPQ7 1066 aa22.28■■□□□ 1.16
HPS4-210ENST00000473782 SLX4Q8IY92 1834 aa22.27■■□□□ 1.16
HPS4-210ENST00000473782 RASSF10A6NK89 507 aa22.27■■□□□ 1.16
HPS4-210ENST00000473782 ADAMTSL1Q8N6G6 1762 aa22.26■■□□□ 1.15
HPS4-210ENST00000473782 RGS19P49795 217 aa22.26■■□□□ 1.15
HPS4-210ENST00000473782 C7orf43Q8WVR3 580 aa22.26■■□□□ 1.15
HPS4-210ENST00000473782 IQCA1LA6NCM1 817 aa22.25■■□□□ 1.15
HPS4-210ENST00000473782 SRGNP10124 158 aa22.25■■□□□ 1.15
HPS4-210ENST00000473782 PRPF40BQ6NWY9 871 aaKnown RBP22.25■■□□□ 1.15
HPS4-210ENST00000473782 SCN4AP35499 1836 aa22.24■■□□□ 1.15
HPS4-210ENST00000473782 DEFB115Q30KQ5 88 aa22.23■■□□□ 1.15
HPS4-210ENST00000473782 STYK1Q6J9G0 422 aa22.23■■□□□ 1.15
HPS4-210ENST00000473782 PCDH10Q9P2E7 1040 aa22.23■■□□□ 1.15
HPS4-210ENST00000473782 ZNF541Q9H0D2 1346 aa22.23■■□□□ 1.15
HPS4-210ENST00000473782 CNKSR1Q969H4 720 aa22.22■■□□□ 1.15
HPS4-210ENST00000473782 TBC1D2BQ9UPU7 963 aa22.22■■□□□ 1.15
HPS4-210ENST00000473782 UBR2Q8IWV8 1755 aa22.21■■□□□ 1.15
HPS4-210ENST00000473782 WDR33Q9C0J8 1336 aaKnown RBP22.21■■□□□ 1.15
HPS4-210ENST00000473782 SCN7AQ01118 1682 aa22.2■■□□□ 1.15
HPS4-210ENST00000473782 A0A087WZG4 1122 aa22.2■■□□□ 1.14
HPS4-210ENST00000473782 EAPPQ56P03 285 aaPredicted RBP22.2■■□□□ 1.14
HPS4-210ENST00000473782 PANK3Q9H999 370 aa22.2■■□□□ 1.14
HPS4-210ENST00000473782 MAP1SQ66K74 1059 aaPredicted RBP22.19■■□□□ 1.14
HPS4-210ENST00000473782 CNTROBQ8N137 903 aa22.19■■□□□ 1.14
HPS4-210ENST00000473782 MASTLQ96GX5 879 aa22.19■■□□□ 1.14
HPS4-210ENST00000473782 CAMTA2O94983 1202 aa22.18■■□□□ 1.14
HPS4-210ENST00000473782 EPHX2P34913 555 aa22.18■■□□□ 1.14
HPS4-210ENST00000473782 MAP2K1Q02750 393 aaPredicted RBP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms