RNA–Protein interactions for RNA: ENST00000471824.6

PDE6B-207, Transcript of phosphodiesterase 6B, humanhuman

TSL 5

Gene PDE6B, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-207ENST00000471824 STARD3NLO95772 234 aa12.5□□□□□ -0.41
PDE6B-207ENST00000471824 RBM46Q8TBY0 533 aaKnown RBP12.5□□□□□ -0.41
PDE6B-207ENST00000471824 KDM2BQ8NHM5 1336 aa12.5□□□□□ -0.41
PDE6B-207ENST00000471824 KCPQ6ZWJ8 1503 aa12.5□□□□□ -0.41
PDE6B-207ENST00000471824 TJP1Q07157 1748 aa12.5□□□□□ -0.41
PDE6B-207ENST00000471824 MYH14Q7Z406 1995 aaKnown RBP12.5□□□□□ -0.41
PDE6B-207ENST00000471824 ZC3H4Q9UPT8 1303 aaKnown RBP12.49□□□□□ -0.41
PDE6B-207ENST00000471824 TTC5Q8N0Z6 440 aa12.49□□□□□ -0.41
PDE6B-207ENST00000471824 BCL2L12Q9HB09 334 aa12.49□□□□□ -0.41
PDE6B-207ENST00000471824 N4BP2Q86UW6 1770 aaPredicted RBP12.48□□□□□ -0.41
PDE6B-207ENST00000471824 ADAMTS7Q9UKP4 1686 aa12.48□□□□□ -0.41
PDE6B-207ENST00000471824 SERPINB2P05120 415 aa12.48□□□□□ -0.41
PDE6B-207ENST00000471824 EIF5P55010 431 aaKnown RBP12.48□□□□□ -0.41
PDE6B-207ENST00000471824 C16orf71Q8IYS4 520 aaPredicted RBP12.48□□□□□ -0.41
PDE6B-207ENST00000471824 GAS2L2Q8NHY3 880 aa12.48□□□□□ -0.41
PDE6B-207ENST00000471824 TEX13AQ9BXU3 409 aaPredicted RBP12.48□□□□□ -0.41
PDE6B-207ENST00000471824 RNF181Q9P0P0 153 aa12.48□□□□□ -0.41
PDE6B-207ENST00000471824 SCN11AQ9UI33 1791 aa12.48□□□□□ -0.41
PDE6B-207ENST00000471824 A0A087WZG4 1122 aa12.47□□□□□ -0.41
PDE6B-207ENST00000471824 GNAT3A8MTJ3 354 aa12.47□□□□□ -0.41
PDE6B-207ENST00000471824 TEFQ10587 303 aa12.47□□□□□ -0.41
PDE6B-207ENST00000471824 FSTL1Q12841 308 aa12.47□□□□□ -0.41
PDE6B-207ENST00000471824 ZNF790Q6PG37 636 aa12.47□□□□□ -0.41
PDE6B-207ENST00000471824 DNAJC5GQ8N7S2 189 aa12.47□□□□□ -0.41
PDE6B-207ENST00000471824 IL17REQ8NFR9 667 aa12.47□□□□□ -0.41
PDE6B-207ENST00000471824 COL3A1P02461 1466 aaPredicted RBP12.46□□□□□ -0.41
PDE6B-207ENST00000471824 U2SURPO15042 1029 aaKnown RBP12.46□□□□□ -0.41
PDE6B-207ENST00000471824 CANXP27824 592 aaKnown RBP12.46□□□□□ -0.41
PDE6B-207ENST00000471824 TTLL6Q8N841 843 aa12.46□□□□□ -0.41
PDE6B-207ENST00000471824 ZNF496Q96IT1 587 aaPredicted RBP12.46□□□□□ -0.41
PDE6B-207ENST00000471824 HEG1Q9ULI3 1381 aa12.45□□□□□ -0.42
PDE6B-207ENST00000471824 BRCA1P38398 1863 aaKnown RBP12.45□□□□□ -0.42
PDE6B-207ENST00000471824 H0YIN7 160 aa12.45□□□□□ -0.42
PDE6B-207ENST00000471824 LMNB1P20700 586 aa12.45□□□□□ -0.42
PDE6B-207ENST00000471824 PDZRN3Q9UPQ7 1066 aa12.45□□□□□ -0.42
PDE6B-207ENST00000471824 CEMIPQ8WUJ3 1361 aa12.44□□□□□ -0.42
PDE6B-207ENST00000471824 IL6STP40189 918 aaPredicted RBP12.44□□□□□ -0.42
PDE6B-207ENST00000471824 C2CD5Q86YS7 1000 aa12.44□□□□□ -0.42
PDE6B-207ENST00000471824 FMNL2Q96PY5 1086 aa12.44□□□□□ -0.42
PDE6B-207ENST00000471824 RASSF7Q02833 373 aa12.43□□□□□ -0.42
PDE6B-207ENST00000471824 BRIP1Q9BX63 1249 aa12.43□□□□□ -0.42
PDE6B-207ENST00000471824 RRAGCQ9HB90 399 aa12.43□□□□□ -0.42
PDE6B-207ENST00000471824 ARFGEF1Q9Y6D6 1849 aa12.43□□□□□ -0.42
PDE6B-207ENST00000471824 GLTPD2A6NH11 291 aa12.42□□□□□ -0.42
PDE6B-207ENST00000471824 PDE6BP35913 854 aa12.42□□□□□ -0.42
PDE6B-207ENST00000471824 TBC1D9BQ66K14 1250 aa12.42□□□□□ -0.42
PDE6B-207ENST00000471824 BICDL1Q6ZP65 573 aa12.42□□□□□ -0.42
PDE6B-207ENST00000471824 NPM2Q86SE8 214 aaKnown RBP12.42□□□□□ -0.42
PDE6B-207ENST00000471824 SMC1BQ8NDV3 1235 aa12.42□□□□□ -0.42
PDE6B-207ENST00000471824 CFAP53Q96M91 514 aa12.42□□□□□ -0.42
PDE6B-207ENST00000471824 NRXN2Q9P2S2 1712 aa12.42□□□□□ -0.42
PDE6B-207ENST00000471824 CARMIL3Q8ND23 1372 aa12.42□□□□□ -0.42
PDE6B-207ENST00000471824 BTBD11A6QL63 1104 aa12.41□□□□□ -0.42
PDE6B-207ENST00000471824 NFKBIEO00221 500 aa12.41□□□□□ -0.42
PDE6B-207ENST00000471824 VEGFAP15692 232 aaPredicted RBP12.41□□□□□ -0.42
PDE6B-207ENST00000471824 PHACTR3Q96KR7 559 aa12.41□□□□□ -0.42
PDE6B-207ENST00000471824 RSPH6AQ9H0K4 717 aa12.41□□□□□ -0.42
PDE6B-207ENST00000471824 TBC1D2BQ9UPU7 963 aa12.41□□□□□ -0.42
PDE6B-207ENST00000471824 UBR2Q8IWV8 1755 aa12.41□□□□□ -0.42
PDE6B-207ENST00000471824 CAMTA2O94983 1202 aa12.4□□□□□ -0.42
PDE6B-207ENST00000471824 PRKAR2BP31323 418 aa12.4□□□□□ -0.42
PDE6B-207ENST00000471824 PRELPP51888 382 aa12.4□□□□□ -0.42
PDE6B-207ENST00000471824 PRR5LQ6MZQ0 368 aa12.4□□□□□ -0.42
PDE6B-207ENST00000471824 KLRG1Q96E93 195 aa12.4□□□□□ -0.42
PDE6B-207ENST00000471824 SETDB2Q96T68 719 aa12.4□□□□□ -0.42
PDE6B-207ENST00000471824 NUDCQ9Y266 331 aa12.4□□□□□ -0.42
PDE6B-207ENST00000471824 ZNF330Q9Y3S2 320 aaPredicted RBP12.4□□□□□ -0.42
PDE6B-207ENST00000471824 A1BGP04217 495 aa12.39□□□□□ -0.43
PDE6B-207ENST00000471824 CNGB1Q14028 1251 aaPredicted RBP12.39□□□□□ -0.43
PDE6B-207ENST00000471824 JMYQ8N9B5 988 aa12.39□□□□□ -0.43
PDE6B-207ENST00000471824 CNBD1Q8NA66 436 aa12.39□□□□□ -0.43
PDE6B-207ENST00000471824 DPY19L2Q6NUT2 758 aa12.38□□□□□ -0.43
PDE6B-207ENST00000471824 CLEC4GQ6UXB4 293 aa12.38□□□□□ -0.43
PDE6B-207ENST00000471824 RTF1Q92541 710 aaKnown RBP12.38□□□□□ -0.43
PDE6B-207ENST00000471824 ZNF622Q969S3 477 aaKnown RBP eCLIP12.38□□□□□ -0.43
PDE6B-207ENST00000471824 LTBP3Q9NS15 1303 aa12.37□□□□□ -0.43
PDE6B-207ENST00000471824 RGL2O15211 777 aa12.37□□□□□ -0.43
PDE6B-207ENST00000471824 NPHP1O15259 732 aa12.37□□□□□ -0.43
PDE6B-207ENST00000471824 KCNQ3O43525 872 aa12.37□□□□□ -0.43
PDE6B-207ENST00000471824 HTATSF1O43719 755 aaKnown RBP12.37□□□□□ -0.43
PDE6B-207ENST00000471824 C21orf2O43822 256 aa12.37□□□□□ -0.43
PDE6B-207ENST00000471824 SNRPA1P09661 255 aaKnown RBP12.37□□□□□ -0.43
PDE6B-207ENST00000471824 ST5P78524 1137 aa12.37□□□□□ -0.43
PDE6B-207ENST00000471824 STYK1Q6J9G0 422 aa12.37□□□□□ -0.43
PDE6B-207ENST00000471824 DZIP3Q86Y13 1208 aaKnown RBP12.37□□□□□ -0.43
PDE6B-207ENST00000471824 CNKSR1Q969H4 720 aa12.37□□□□□ -0.43
PDE6B-207ENST00000471824 U2AF1L5P0DN76 240 aaPredicted RBP12.36□□□□□ -0.43
PDE6B-207ENST00000471824 SRGNP10124 158 aa12.36□□□□□ -0.43
PDE6B-207ENST00000471824 PPP2R1AP30153 589 aa12.36□□□□□ -0.43
PDE6B-207ENST00000471824 HTRA3P83110 453 aa12.36□□□□□ -0.43
PDE6B-207ENST00000471824 U2AF1Q01081 240 aaKnown RBP eCLIP12.36□□□□□ -0.43
PDE6B-207ENST00000471824 SOGA3Q5TF21 947 aa12.36□□□□□ -0.43
PDE6B-207ENST00000471824 ZNF652Q9Y2D9 606 aa12.36□□□□□ -0.43
PDE6B-207ENST00000471824 USP16Q9Y5T5 823 aa12.36□□□□□ -0.43
PDE6B-207ENST00000471824 TNRC6CQ9HCJ0 1690 aaKnown RBP12.35□□□□□ -0.43
PDE6B-207ENST00000471824 ERFEQ4G0M1 354 aa12.35□□□□□ -0.43
PDE6B-207ENST00000471824 CCDC24Q8N4L8 307 aa12.35□□□□□ -0.43
PDE6B-207ENST00000471824 MASTLQ96GX5 879 aa12.35□□□□□ -0.43
PDE6B-207ENST00000471824 TAOK3Q9H2K8 898 aa12.35□□□□□ -0.43
PDE6B-207ENST00000471824 SCN7AQ01118 1682 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms