RNA–Protein interactions for RNA: ENST00000471660.5

CHMP2B-203, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2 BASIC

Gene CHMP2B, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-203ENST00000471660 PCDH10Q9P2E7 1040 aa13.01□□□□□ -0.33
CHMP2B-203ENST00000471660 TRAK1Q9UPV9 953 aa13.01□□□□□ -0.33
CHMP2B-203ENST00000471660 SYCE3A1L190 88 aa13.01□□□□□ -0.33
CHMP2B-203ENST00000471660 NBPF14Q5TI25 921 aa13.01□□□□□ -0.33
CHMP2B-203ENST00000471660 TERF2IPQ9NYB0 399 aa13.01□□□□□ -0.33
CHMP2B-203ENST00000471660 RAD50Q92878 1312 aa13.01□□□□□ -0.33
CHMP2B-203ENST00000471660 RGPD3A6NKT7 1758 aaPredicted RBP13□□□□□ -0.33
CHMP2B-203ENST00000471660 RGPD4Q7Z3J3 1758 aa13□□□□□ -0.33
CHMP2B-203ENST00000471660 HDAC1Q13547 482 aaPredicted RBP13□□□□□ -0.33
CHMP2B-203ENST00000471660 CARD14Q9BXL6 1004 aa13□□□□□ -0.33
CHMP2B-203ENST00000471660 TSPY26PQ9H489 355 aa13□□□□□ -0.33
CHMP2B-203ENST00000471660 NOP2P46087 812 aaKnown RBP13□□□□□ -0.33
CHMP2B-203ENST00000471660 TPM3P06753 285 aa12.99□□□□□ -0.33
CHMP2B-203ENST00000471660 KIAA1524Q8TCG1 905 aa12.99□□□□□ -0.33
CHMP2B-203ENST00000471660 CWC22Q9HCG8 908 aaKnown RBP12.99□□□□□ -0.33
CHMP2B-203ENST00000471660 RBM27Q9P2N5 1060 aaKnown RBP12.99□□□□□ -0.33
CHMP2B-203ENST00000471660 SHANK3Q9BYB0 1731 aa12.99□□□□□ -0.33
CHMP2B-203ENST00000471660 CDC42BPGQ6DT37 1551 aa12.99□□□□□ -0.33
CHMP2B-203ENST00000471660 CYP2C19P33261 490 aa12.98□□□□□ -0.33
CHMP2B-203ENST00000471660 CCDC27Q2M243 656 aa12.98□□□□□ -0.33
CHMP2B-203ENST00000471660 APPP05067 770 aa12.98□□□□□ -0.33
CHMP2B-203ENST00000471660 MORC1Q86VD1 984 aa12.98□□□□□ -0.33
CHMP2B-203ENST00000471660 KCNG1Q9UIX4 513 aa12.98□□□□□ -0.33
CHMP2B-203ENST00000471660 KIF1AQ12756 1690 aa12.98□□□□□ -0.33
CHMP2B-203ENST00000471660 PRPF40AO75400 957 aaKnown RBP12.97□□□□□ -0.33
CHMP2B-203ENST00000471660 RARSP54136 660 aaKnown RBP12.97□□□□□ -0.33
CHMP2B-203ENST00000471660 BRMS1Q9HCU9 246 aa12.97□□□□□ -0.33
CHMP2B-203ENST00000471660 KIF20BQ96Q89 1820 aa12.96□□□□□ -0.33
CHMP2B-203ENST00000471660 REC8O95072 547 aa12.96□□□□□ -0.33
CHMP2B-203ENST00000471660 RLBP1P12271 317 aa12.96□□□□□ -0.33
CHMP2B-203ENST00000471660 RAD51AP2Q09MP3 1159 aa12.96□□□□□ -0.33
CHMP2B-203ENST00000471660 ORAI2Q96SN7 254 aa12.96□□□□□ -0.33
CHMP2B-203ENST00000471660 FOXD4L1Q9NU39 408 aa12.96□□□□□ -0.33
CHMP2B-203ENST00000471660 SMTNL1A8MU46 457 aa12.96□□□□□ -0.34
CHMP2B-203ENST00000471660 MYCBPQ99417 103 aaPredicted RBP12.96□□□□□ -0.34
CHMP2B-203ENST00000471660 TTC12Q9H892 705 aaPredicted RBP12.96□□□□□ -0.34
CHMP2B-203ENST00000471660 PHF14O94880 888 aa12.95□□□□□ -0.34
CHMP2B-203ENST00000471660 MYCNP04198 464 aaPredicted RBP12.95□□□□□ -0.34
CHMP2B-203ENST00000471660 MUM1L1Q5H9M0 696 aa12.95□□□□□ -0.34
CHMP2B-203ENST00000471660 SYAP1Q96A49 352 aaPredicted RBP12.95□□□□□ -0.34
CHMP2B-203ENST00000471660 NCAPGQ9BPX3 1015 aa12.95□□□□□ -0.34
CHMP2B-203ENST00000471660 TNNT3P45378 269 aaPredicted RBP12.95□□□□□ -0.34
CHMP2B-203ENST00000471660 MVPQ14764 893 aaKnown RBP12.95□□□□□ -0.34
CHMP2B-203ENST00000471660 HDGFL2Q7Z4V5 671 aaPredicted RBP12.95□□□□□ -0.34
CHMP2B-203ENST00000471660 RNF214Q8ND24 703 aa12.95□□□□□ -0.34
CHMP2B-203ENST00000471660 HNRNPH2P55795 449 aaKnown RBP12.94□□□□□ -0.34
CHMP2B-203ENST00000471660 BMP2KLQ5H9B9 411 aa12.94□□□□□ -0.34
CHMP2B-203ENST00000471660 TMEM132EQ6IEE7 984 aa12.94□□□□□ -0.34
CHMP2B-203ENST00000471660 C17orf53Q8N3J3 647 aaPredicted RBP12.94□□□□□ -0.34
CHMP2B-203ENST00000471660 RASSF4Q9H2L5 321 aa12.94□□□□□ -0.34
CHMP2B-203ENST00000471660 DHX16O60231 1041 aaKnown RBP12.94□□□□□ -0.34
CHMP2B-203ENST00000471660 BRPF1P55201 1214 aaPredicted RBP12.94□□□□□ -0.34
CHMP2B-203ENST00000471660 WDR63Q8IWG1 891 aa12.94□□□□□ -0.34
CHMP2B-203ENST00000471660 CNPY4Q8N129 248 aa12.94□□□□□ -0.34
CHMP2B-203ENST00000471660 ZNF397Q8NF99 534 aaPredicted RBP12.94□□□□□ -0.34
CHMP2B-203ENST00000471660 APAF1O14727 1248 aa12.93□□□□□ -0.34
CHMP2B-203ENST00000471660 CT47B1P0C2W7 299 aaPredicted RBP12.93□□□□□ -0.34
CHMP2B-203ENST00000471660 RUNDC1Q96C34 613 aa12.93□□□□□ -0.34
CHMP2B-203ENST00000471660 KIF1BPQ96EK5 621 aa12.93□□□□□ -0.34
CHMP2B-203ENST00000471660 RSPH14Q9UHP6 348 aa12.93□□□□□ -0.34
CHMP2B-203ENST00000471660 ERICH4A6NGS2 130 aa12.93□□□□□ -0.34
CHMP2B-203ENST00000471660 GTF2A1P52655 376 aaPredicted RBP12.93□□□□□ -0.34
CHMP2B-203ENST00000471660 RABEP1Q15276 862 aa12.93□□□□□ -0.34
CHMP2B-203ENST00000471660 ICE2Q659A1 982 aa12.93□□□□□ -0.34
CHMP2B-203ENST00000471660 COL14A1Q05707 1796 aaKnown RBP12.92□□□□□ -0.34
CHMP2B-203ENST00000471660 LOC102724159A0A0B4J2E5 919 aa12.92□□□□□ -0.34
CHMP2B-203ENST00000471660 PWP2Q15269 919 aaKnown RBP12.92□□□□□ -0.34
CHMP2B-203ENST00000471660 SLFNL1Q499Z3 407 aa12.92□□□□□ -0.34
CHMP2B-203ENST00000471660 CCDC9Q9Y3X0 531 aaKnown RBP12.92□□□□□ -0.34
CHMP2B-203ENST00000471660 METP08581 1390 aa12.92□□□□□ -0.34
CHMP2B-203ENST00000471660 ADCY5O95622 1261 aa12.92□□□□□ -0.34
CHMP2B-203ENST00000471660 SLC12A5Q9H2X9 1139 aa12.92□□□□□ -0.34
CHMP2B-203ENST00000471660 SMC4Q9NTJ3 1288 aa12.92□□□□□ -0.34
CHMP2B-203ENST00000471660 ZBTB7CA1YPR0 619 aa12.91□□□□□ -0.34
CHMP2B-203ENST00000471660 CEP120Q8N960 986 aa12.91□□□□□ -0.34
CHMP2B-203ENST00000471660 CARD10Q9BWT7 1032 aa12.91□□□□□ -0.34
CHMP2B-203ENST00000471660 PAXBP1Q9Y5B6 917 aa12.91□□□□□ -0.34
CHMP2B-203ENST00000471660 CD163L1Q9NR16 1453 aa12.91□□□□□ -0.34
CHMP2B-203ENST00000471660 CHMP4CQ96CF2 233 aa12.91□□□□□ -0.34
CHMP2B-203ENST00000471660 NSFL1CQ9UNZ2 370 aaKnown RBP12.91□□□□□ -0.34
CHMP2B-203ENST00000471660 A0A1W2PP64 1363 aa12.9□□□□□ -0.34
CHMP2B-203ENST00000471660 MAP3K5Q99683 1374 aa12.9□□□□□ -0.34
CHMP2B-203ENST00000471660 GUCY2CP25092 1073 aa12.9□□□□□ -0.34
CHMP2B-203ENST00000471660 PRELPP51888 382 aa12.9□□□□□ -0.34
CHMP2B-203ENST00000471660 ZBTB9Q96C00 473 aa12.9□□□□□ -0.34
CHMP2B-203ENST00000471660 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.9□□□□□ -0.34
CHMP2B-203ENST00000471660 ZDHHC9Q9Y397 364 aa12.9□□□□□ -0.34
CHMP2B-203ENST00000471660 SPATA31A3Q5VYP0 1347 aa12.9□□□□□ -0.34
CHMP2B-203ENST00000471660 A0A0G2JS52 829 aa12.9□□□□□ -0.34
CHMP2B-203ENST00000471660 HSPA6P17066 643 aa12.9□□□□□ -0.34
CHMP2B-203ENST00000471660 NUCB1Q02818 461 aa12.9□□□□□ -0.34
CHMP2B-203ENST00000471660 LMOD3Q0VAK6 560 aa12.9□□□□□ -0.34
CHMP2B-203ENST00000471660 EDC4Q6P2E9 1401 aaKnown RBP12.89□□□□□ -0.35
CHMP2B-203ENST00000471660 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.89□□□□□ -0.35
CHMP2B-203ENST00000471660 HSP90B1P14625 803 aaKnown RBP12.89□□□□□ -0.35
CHMP2B-203ENST00000471660 FAM196AQ6ZSG2 479 aa12.89□□□□□ -0.35
CHMP2B-203ENST00000471660 PRAM1Q96QH2 718 aa12.89□□□□□ -0.35
CHMP2B-203ENST00000471660 KCNF1Q9H3M0 494 aa12.89□□□□□ -0.35
CHMP2B-203ENST00000471660 USP25Q9UHP3 1055 aa12.89□□□□□ -0.35
CHMP2B-203ENST00000471660 MON2Q7Z3U7 1717 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms