RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 CHMP4BQ9H444 224 aaKnown RBP8.11□□□□□ -1.11
SPEN-204ENST00000471538 CAMTA1Q9Y6Y1 1673 aa8.1□□□□□ -1.11
SPEN-204ENST00000471538 NCAPD2Q15021 1401 aa8.1□□□□□ -1.11
SPEN-204ENST00000471538 N4BP2Q86UW6 1770 aaPredicted RBP8.1□□□□□ -1.11
SPEN-204ENST00000471538 KIF1AQ12756 1690 aa8.1□□□□□ -1.11
SPEN-204ENST00000471538 C1orf167Q5SNV9 1468 aa8.1□□□□□ -1.11
SPEN-204ENST00000471538 VASPP50552 380 aaPredicted RBP8.1□□□□□ -1.11
SPEN-204ENST00000471538 HAP1P54257 671 aaPredicted RBP8.1□□□□□ -1.11
SPEN-204ENST00000471538 INTS3Q68E01 1043 aaKnown RBP8.1□□□□□ -1.11
SPEN-204ENST00000471538 SIRT2Q8IXJ6 389 aa8.1□□□□□ -1.11
SPEN-204ENST00000471538 FNBP4Q8N3X1 1017 aaPredicted RBP8.1□□□□□ -1.11
SPEN-204ENST00000471538 ABTB2Q8N961 1025 aa8.1□□□□□ -1.11
SPEN-204ENST00000471538 USP21Q9UK80 565 aa8.1□□□□□ -1.11
SPEN-204ENST00000471538 COL22A1Q8NFW1 1626 aaPredicted RBP8.09□□□□□ -1.11
SPEN-204ENST00000471538 ATP10DQ9P241 1426 aa8.09□□□□□ -1.11
SPEN-204ENST00000471538 BCL9LQ86UU0 1499 aa8.09□□□□□ -1.11
SPEN-204ENST00000471538 BRWD3Q6RI45 1802 aa8.09□□□□□ -1.11
SPEN-204ENST00000471538 PTPRCP08575 1304 aa8.08□□□□□ -1.12
SPEN-204ENST00000471538 SOS2Q07890 1332 aaPredicted RBP8.08□□□□□ -1.12
SPEN-204ENST00000471538 LMO7Q8WWI1 1683 aa8.08□□□□□ -1.12
SPEN-204ENST00000471538 MAP3K5Q99683 1374 aa8.08□□□□□ -1.12
SPEN-204ENST00000471538 LRP5O75197 1615 aa8.08□□□□□ -1.12
SPEN-204ENST00000471538 PSEN1P49768 467 aa8.08□□□□□ -1.12
SPEN-204ENST00000471538 NUTM2GQ5VZR2 741 aa8.08□□□□□ -1.12
SPEN-204ENST00000471538 IP6K1Q92551 441 aa8.08□□□□□ -1.12
SPEN-204ENST00000471538 GCC1Q96CN9 775 aa8.08□□□□□ -1.12
SPEN-204ENST00000471538 TBC1D32Q96NH3 1257 aa8.08□□□□□ -1.12
SPEN-204ENST00000471538 ORAI2Q96SN7 254 aa8.08□□□□□ -1.12
SPEN-204ENST00000471538 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.08□□□□□ -1.12
SPEN-204ENST00000471538 TRPC5Q9UL62 973 aaPredicted RBP8.08□□□□□ -1.12
SPEN-204ENST00000471538 RGPD2P0DJD1 1756 aa8.08□□□□□ -1.12
SPEN-204ENST00000471538 ALS2Q96Q42 1657 aa8.08□□□□□ -1.12
SPEN-204ENST00000471538 GLI3P10071 1580 aa8.08□□□□□ -1.12
SPEN-204ENST00000471538 CEMIPQ8WUJ3 1361 aa8.07□□□□□ -1.12
SPEN-204ENST00000471538 KDM3BQ7LBC6 1761 aa8.07□□□□□ -1.12
SPEN-204ENST00000471538 CHRM1P11229 460 aaPredicted RBP8.07□□□□□ -1.12
SPEN-204ENST00000471538 HOXB1P14653 301 aaPredicted RBP8.07□□□□□ -1.12
SPEN-204ENST00000471538 DEFB132Q7Z7B7 95 aa8.07□□□□□ -1.12
SPEN-204ENST00000471538 CHD1LQ86WJ1 897 aa8.07□□□□□ -1.12
SPEN-204ENST00000471538 C1orf115Q9H7X2 142 aa8.07□□□□□ -1.12
SPEN-204ENST00000471538 BABAM1Q9NWV8 329 aa8.07□□□□□ -1.12
SPEN-204ENST00000471538 GNAT3A8MTJ3 354 aa8.06□□□□□ -1.12
SPEN-204ENST00000471538 KCNH5Q8NCM2 988 aa8.06□□□□□ -1.12
SPEN-204ENST00000471538 IL17REQ8NFR9 667 aa8.06□□□□□ -1.12
SPEN-204ENST00000471538 RTF1Q92541 710 aaKnown RBP8.06□□□□□ -1.12
SPEN-204ENST00000471538 TSPYL4Q9UJ04 414 aa8.06□□□□□ -1.12
SPEN-204ENST00000471538 SOS1Q07889 1333 aaPredicted RBP8.06□□□□□ -1.12
SPEN-204ENST00000471538 ADAMTS7Q9UKP4 1686 aa8.06□□□□□ -1.12
SPEN-204ENST00000471538 SLC4A3P48751 1232 aa8.05□□□□□ -1.12
SPEN-204ENST00000471538 NBR1Q14596 966 aa8.05□□□□□ -1.12
SPEN-204ENST00000471538 ESCO1Q5FWF5 840 aa8.05□□□□□ -1.12
SPEN-204ENST00000471538 DPY19L2Q6NUT2 758 aa8.05□□□□□ -1.12
SPEN-204ENST00000471538 ANKRD44Q8N8A2 993 aa8.05□□□□□ -1.12
SPEN-204ENST00000471538 LNPKQ9C0E8 428 aa8.05□□□□□ -1.12
SPEN-204ENST00000471538 MIS18AQ9NYP9 233 aa8.05□□□□□ -1.12
SPEN-204ENST00000471538 CACNA1FO60840 1977 aa8.05□□□□□ -1.12
SPEN-204ENST00000471538 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.05□□□□□ -1.12
SPEN-204ENST00000471538 PSME1Q06323 249 aa8.04□□□□□ -1.12
SPEN-204ENST00000471538 BMP2KLQ5H9B9 411 aa8.04□□□□□ -1.12
SPEN-204ENST00000471538 NBPF6Q5VWK0 638 aa8.04□□□□□ -1.12
SPEN-204ENST00000471538 G2E3Q7L622 706 aa8.04□□□□□ -1.12
SPEN-204ENST00000471538 ARHGEF25Q86VW2 580 aa8.04□□□□□ -1.12
SPEN-204ENST00000471538 CCDC125Q86Z20 511 aa8.04□□□□□ -1.12
SPEN-204ENST00000471538 RNF166Q96A37 237 aaPredicted RBP8.04□□□□□ -1.12
SPEN-204ENST00000471538 NBPF4Q96M43 638 aa8.04□□□□□ -1.12
SPEN-204ENST00000471538 DCTPP1Q9H773 170 aa8.04□□□□□ -1.12
SPEN-204ENST00000471538 PXDNLA1KZ92 1463 aa8.04□□□□□ -1.12
SPEN-204ENST00000471538 PXDNQ92626 1479 aa8.04□□□□□ -1.12
SPEN-204ENST00000471538 OVOS2A0A0G2JMS6 1433 aa8.04□□□□□ -1.12
SPEN-204ENST00000471538 CRYBG1Q9Y4K1 1723 aa8.04□□□□□ -1.12
SPEN-204ENST00000471538 CEP85Q6P2H3 762 aa8.03□□□□□ -1.12
SPEN-204ENST00000471538 RPAP2Q8IXW5 612 aaPredicted RBP8.03□□□□□ -1.12
SPEN-204ENST00000471538 USHBP1Q8N6Y0 703 aa8.03□□□□□ -1.12
SPEN-204ENST00000471538 LTV1Q96GA3 475 aaPredicted RBP8.03□□□□□ -1.12
SPEN-204ENST00000471538 GJD4Q96KN9 370 aaPredicted RBP8.03□□□□□ -1.12
SPEN-204ENST00000471538 USP35Q9P2H5 1018 aa8.03□□□□□ -1.12
SPEN-204ENST00000471538 SIPA1L3O60292 1781 aaPredicted RBP8.03□□□□□ -1.12
SPEN-204ENST00000471538 ABCC6O95255 1503 aa8.03□□□□□ -1.12
SPEN-204ENST00000471538 GCP02774 474 aa8.03□□□□□ -1.12
SPEN-204ENST00000471538 TAF7Q15545 349 aaPredicted RBP8.03□□□□□ -1.12
SPEN-204ENST00000471538 ANKRD45Q5TZF3 282 aa8.03□□□□□ -1.12
SPEN-204ENST00000471538 MEIS3Q99687 375 aa8.03□□□□□ -1.12
SPEN-204ENST00000471538 UPF2Q9HAU5 1272 aaKnown RBP8.03□□□□□ -1.12
SPEN-204ENST00000471538 NPHP3Q7Z494 1330 aa8.02□□□□□ -1.12
SPEN-204ENST00000471538 COL18A1P39060 1754 aa8.02□□□□□ -1.13
SPEN-204ENST00000471538 SLIT2O94813 1529 aa8.02□□□□□ -1.13
SPEN-204ENST00000471538 PSDA5PKW4 1024 aaPredicted RBP8.02□□□□□ -1.13
SPEN-204ENST00000471538 CCT4P50991 539 aaKnown RBP8.02□□□□□ -1.13
SPEN-204ENST00000471538 CCDC30Q5VVM6 783 aa8.02□□□□□ -1.13
SPEN-204ENST00000471538 RGPD5Q99666 1765 aa8.01□□□□□ -1.13
SPEN-204ENST00000471538 RBM25P49756 843 aaKnown RBP8.01□□□□□ -1.13
SPEN-204ENST00000471538 XPCQ01831 940 aaPredicted RBP8.01□□□□□ -1.13
SPEN-204ENST00000471538 FLIIQ13045 1269 aa8.01□□□□□ -1.13
SPEN-204ENST00000471538 PDAP1Q13442 181 aaKnown RBP8.01□□□□□ -1.13
SPEN-204ENST00000471538 KRT28Q7Z3Y7 464 aa8.01□□□□□ -1.13
SPEN-204ENST00000471538 PLEKHM2Q8IWE5 1019 aa8.01□□□□□ -1.13
SPEN-204ENST00000471538 TBC1D2Q9BYX2 928 aa8.01□□□□□ -1.13
SPEN-204ENST00000471538 C22orf23Q9BZE7 217 aa8.01□□□□□ -1.13
SPEN-204ENST00000471538 TUBGCP6Q96RT7 1819 aa8.01□□□□□ -1.13
SPEN-204ENST00000471538 F6X3S4 739 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms