RNA–Protein interactions for RNA: ENST00000471511.1

RPRD1B-204, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-204ENST00000471511 ZNF526Q8TF50 670 aaPredicted RBP13.17□□□□□ -0.3
RPRD1B-204ENST00000471511 BCS1LQ9Y276 419 aa13.17□□□□□ -0.3
RPRD1B-204ENST00000471511 VIRMAQ69YN4 1812 aaKnown RBP13.17□□□□□ -0.3
RPRD1B-204ENST00000471511 CANXP27824 592 aaKnown RBP13.16□□□□□ -0.3
RPRD1B-204ENST00000471511 DCTN1Q14203 1278 aa13.16□□□□□ -0.3
RPRD1B-204ENST00000471511 ZNF790Q6PG37 636 aa13.16□□□□□ -0.3
RPRD1B-204ENST00000471511 VSIG10Q8N0Z9 540 aa13.16□□□□□ -0.3
RPRD1B-204ENST00000471511 NARFQ9UHQ1 456 aa13.16□□□□□ -0.3
RPRD1B-204ENST00000471511 CEMIPQ8WUJ3 1361 aa13.16□□□□□ -0.3
RPRD1B-204ENST00000471511 UBR2Q8IWV8 1755 aa13.15□□□□□ -0.3
RPRD1B-204ENST00000471511 GIGYF1O75420 1035 aaPredicted RBP13.15□□□□□ -0.3
RPRD1B-204ENST00000471511 A1BGP04217 495 aa13.15□□□□□ -0.3
RPRD1B-204ENST00000471511 EIF5P55010 431 aaKnown RBP13.15□□□□□ -0.3
RPRD1B-204ENST00000471511 MCM10Q7L590 875 aa13.15□□□□□ -0.3
RPRD1B-204ENST00000471511 GAS2L2Q8NHY3 880 aa13.15□□□□□ -0.3
RPRD1B-204ENST00000471511 COL15A1P39059 1388 aa13.15□□□□□ -0.3
RPRD1B-204ENST00000471511 SENP3-EIF4A1A0A087X0R7 540 aa13.14□□□□□ -0.31
RPRD1B-204ENST00000471511 PIP4K2AP48426 406 aaPredicted RBP13.14□□□□□ -0.31
RPRD1B-204ENST00000471511 HEG1Q9ULI3 1381 aa13.14□□□□□ -0.31
RPRD1B-204ENST00000471511 SIPA1L3O60292 1781 aaPredicted RBP13.14□□□□□ -0.31
RPRD1B-204ENST00000471511 CARMIL3Q8ND23 1372 aa13.13□□□□□ -0.31
RPRD1B-204ENST00000471511 FCHSD2O94868 740 aa13.13□□□□□ -0.31
RPRD1B-204ENST00000471511 U2AF1L5P0DN76 240 aaPredicted RBP13.13□□□□□ -0.31
RPRD1B-204ENST00000471511 PRELPP51888 382 aa13.13□□□□□ -0.31
RPRD1B-204ENST00000471511 U2AF1Q01081 240 aaKnown RBP eCLIP13.13□□□□□ -0.31
RPRD1B-204ENST00000471511 ARHGAP27Q6ZUM4 889 aa13.13□□□□□ -0.31
RPRD1B-204ENST00000471511 USP16Q9Y5T5 823 aa13.13□□□□□ -0.31
RPRD1B-204ENST00000471511 KIF3CO14782 793 aa13.12□□□□□ -0.31
RPRD1B-204ENST00000471511 ZPR1O75312 459 aa13.12□□□□□ -0.31
RPRD1B-204ENST00000471511 TEFQ10587 303 aa13.12□□□□□ -0.31
RPRD1B-204ENST00000471511 CCDC24Q8N4L8 307 aa13.12□□□□□ -0.31
RPRD1B-204ENST00000471511 TBC1D2BQ9UPU7 963 aa13.12□□□□□ -0.31
RPRD1B-204ENST00000471511 BRCA1P38398 1863 aaKnown RBP13.12□□□□□ -0.31
RPRD1B-204ENST00000471511 SERPINB2P05120 415 aa13.11□□□□□ -0.31
RPRD1B-204ENST00000471511 TBC1D9BQ66K14 1250 aa13.11□□□□□ -0.31
RPRD1B-204ENST00000471511 BICDL1Q6ZP65 573 aa13.11□□□□□ -0.31
RPRD1B-204ENST00000471511 TTC5Q8N0Z6 440 aa13.11□□□□□ -0.31
RPRD1B-204ENST00000471511 CFAP53Q96M91 514 aa13.11□□□□□ -0.31
RPRD1B-204ENST00000471511 GPBP1L1Q9HC44 474 aaPredicted RBP13.11□□□□□ -0.31
RPRD1B-204ENST00000471511 MIS18AQ9NYP9 233 aa13.11□□□□□ -0.31
RPRD1B-204ENST00000471511 BTBD11A6QL63 1104 aa13.1□□□□□ -0.31
RPRD1B-204ENST00000471511 PIM2Q9P1W9 311 aa13.1□□□□□ -0.31
RPRD1B-204ENST00000471511 AFDNP55196 1824 aaKnown RBP13.09□□□□□ -0.31
RPRD1B-204ENST00000471511 CAMTA2O94983 1202 aa13.09□□□□□ -0.31
RPRD1B-204ENST00000471511 STARD3NLO95772 234 aa13.09□□□□□ -0.31
RPRD1B-204ENST00000471511 FMNL2Q96PY5 1086 aa13.09□□□□□ -0.31
RPRD1B-204ENST00000471511 PLEKHF1Q96S99 279 aa13.09□□□□□ -0.31
RPRD1B-204ENST00000471511 NRXN2Q9P2S2 1712 aa13.09□□□□□ -0.31
RPRD1B-204ENST00000471511 CEP350Q5VT06 3117 aa13.08□□□□□ -0.32
RPRD1B-204ENST00000471511 NBPF26B4DH59 902 aa13.08□□□□□ -0.32
RPRD1B-204ENST00000471511 DALRD3Q5D0E6 543 aaKnown RBP13.08□□□□□ -0.32
RPRD1B-204ENST00000471511 C9orf131Q5VYM1 1079 aa13.08□□□□□ -0.32
RPRD1B-204ENST00000471511 NBPF10Q6P3W6 841 aaKnown RBP13.08□□□□□ -0.32
RPRD1B-204ENST00000471511 NBPF15Q8N660 670 aa13.08□□□□□ -0.32
RPRD1B-204ENST00000471511 THUMPD2Q9BTF0 503 aaKnown RBP13.08□□□□□ -0.32
RPRD1B-204ENST00000471511 NMRK2Q9NPI5 230 aa13.08□□□□□ -0.32
RPRD1B-204ENST00000471511 NUDCQ9Y266 331 aa13.08□□□□□ -0.32
RPRD1B-204ENST00000471511 IL6STP40189 918 aaPredicted RBP13.07□□□□□ -0.32
RPRD1B-204ENST00000471511 ZNF330Q9Y3S2 320 aaPredicted RBP13.07□□□□□ -0.32
RPRD1B-204ENST00000471511 RASSF7Q02833 373 aa13.06□□□□□ -0.32
RPRD1B-204ENST00000471511 PRR5LQ6MZQ0 368 aa13.06□□□□□ -0.32
RPRD1B-204ENST00000471511 C2CD5Q86YS7 1000 aa13.05□□□□□ -0.32
RPRD1B-204ENST00000471511 TEX13AQ9BXU3 409 aaPredicted RBP13.05□□□□□ -0.32
RPRD1B-204ENST00000471511 ARFGEF1Q9Y6D6 1849 aa13.04□□□□□ -0.32
RPRD1B-204ENST00000471511 A0A087WZG4 1122 aa13.04□□□□□ -0.32
RPRD1B-204ENST00000471511 ANKRD31Q8N7Z5 1873 aa13.04□□□□□ -0.32
RPRD1B-204ENST00000471511 NFKBIEO00221 500 aa13.03□□□□□ -0.32
RPRD1B-204ENST00000471511 HTATSF1O43719 755 aaKnown RBP13.03□□□□□ -0.32
RPRD1B-204ENST00000471511 SNRPA1P09661 255 aaKnown RBP13.03□□□□□ -0.32
RPRD1B-204ENST00000471511 TAF7Q15545 349 aaPredicted RBP13.03□□□□□ -0.32
RPRD1B-204ENST00000471511 DZIP3Q86Y13 1208 aaKnown RBP13.03□□□□□ -0.32
RPRD1B-204ENST00000471511 RTF1Q92541 710 aaKnown RBP13.03□□□□□ -0.32
RPRD1B-204ENST00000471511 RNF181Q9P0P0 153 aa13.03□□□□□ -0.32
RPRD1B-204ENST00000471511 SCN7AQ01118 1682 aa13.02□□□□□ -0.32
RPRD1B-204ENST00000471511 DDX10Q13206 875 aaKnown RBP13.02□□□□□ -0.33
RPRD1B-204ENST00000471511 HLFQ16534 295 aa13.02□□□□□ -0.33
RPRD1B-204ENST00000471511 ZNF219Q9P2Y4 722 aaPredicted RBP13.02□□□□□ -0.33
RPRD1B-204ENST00000471511 HSPA6P17066 643 aa13.01□□□□□ -0.33
RPRD1B-204ENST00000471511 NFE2L2Q16236 605 aa13.01□□□□□ -0.33
RPRD1B-204ENST00000471511 TTLL6Q8N841 843 aa13.01□□□□□ -0.33
RPRD1B-204ENST00000471511 BRIP1Q9BX63 1249 aa13.01□□□□□ -0.33
RPRD1B-204ENST00000471511 SBF1O95248 1867 aa13□□□□□ -0.33
RPRD1B-204ENST00000471511 H0YIN7 160 aa13□□□□□ -0.33
RPRD1B-204ENST00000471511 EIF4A1P60842 406 aaKnown RBP13□□□□□ -0.33
RPRD1B-204ENST00000471511 COL11A2P13942 1736 aaPredicted RBP12.99□□□□□ -0.33
RPRD1B-204ENST00000471511 C21orf2O43822 256 aa12.99□□□□□ -0.33
RPRD1B-204ENST00000471511 TTLL7Q6ZT98 887 aa12.99□□□□□ -0.33
RPRD1B-204ENST00000471511 SLC51AQ86UW1 340 aa12.99□□□□□ -0.33
RPRD1B-204ENST00000471511 ZNF622Q969S3 477 aaKnown RBP eCLIP12.99□□□□□ -0.33
RPRD1B-204ENST00000471511 SETDB2Q96T68 719 aa12.99□□□□□ -0.33
RPRD1B-204ENST00000471511 RRAGCQ9HB90 399 aa12.99□□□□□ -0.33
RPRD1B-204ENST00000471511 DLG5Q8TDM6 1919 aa12.99□□□□□ -0.33
RPRD1B-204ENST00000471511 DLEC1Q9Y238 1755 aa12.99□□□□□ -0.33
RPRD1B-204ENST00000471511 POTECB2RU33 542 aa12.98□□□□□ -0.33
RPRD1B-204ENST00000471511 HTRA3P83110 453 aa12.98□□□□□ -0.33
RPRD1B-204ENST00000471511 OLFM4Q6UX06 510 aa12.98□□□□□ -0.33
RPRD1B-204ENST00000471511 NGEFQ8N5V2 710 aa12.98□□□□□ -0.33
RPRD1B-204ENST00000471511 BCORQ6W2J9 1755 aa12.98□□□□□ -0.33
RPRD1B-204ENST00000471511 FAM177BA6PVY3 158 aa12.97□□□□□ -0.33
RPRD1B-204ENST00000471511 TOMM70O94826 608 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms