RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 PIP4K2AP48426 406 aaPredicted RBP10.59□□□□□ -0.71
GTF3A-206ENST00000470606 CDCA7Q9BWT1 371 aaPredicted RBP10.59□□□□□ -0.71
GTF3A-206ENST00000470606 BCL9O00512 1426 aa10.59□□□□□ -0.71
GTF3A-206ENST00000470606 THSD7AQ9UPZ6 1657 aa10.59□□□□□ -0.71
GTF3A-206ENST00000470606 AFF2P51816 1311 aa10.59□□□□□ -0.71
GTF3A-206ENST00000470606 N4BP2Q86UW6 1770 aaPredicted RBP10.59□□□□□ -0.71
GTF3A-206ENST00000470606 ATG3Q9NT62 314 aa10.58□□□□□ -0.72
GTF3A-206ENST00000470606 ADCY9O60503 1353 aa10.58□□□□□ -0.72
GTF3A-206ENST00000470606 LAMB4A4D0S4 1761 aa10.58□□□□□ -0.72
GTF3A-206ENST00000470606 PTCD1O75127 700 aaKnown RBP10.58□□□□□ -0.72
GTF3A-206ENST00000470606 PRIM1P49642 420 aaKnown RBP10.58□□□□□ -0.72
GTF3A-206ENST00000470606 FKBP5Q13451 457 aaPredicted RBP10.58□□□□□ -0.72
GTF3A-206ENST00000470606 TTC5Q8N0Z6 440 aa10.58□□□□□ -0.72
GTF3A-206ENST00000470606 FMNL2Q96PY5 1086 aa10.58□□□□□ -0.72
GTF3A-206ENST00000470606 SLC4A9Q96Q91 983 aa10.58□□□□□ -0.72
GTF3A-206ENST00000470606 C1orf115Q9H7X2 142 aa10.58□□□□□ -0.72
GTF3A-206ENST00000470606 TMOD3Q9NYL9 352 aa10.58□□□□□ -0.72
GTF3A-206ENST00000470606 NBPF26B4DH59 902 aa10.57□□□□□ -0.72
GTF3A-206ENST00000470606 SNRPA1P09661 255 aaKnown RBP10.57□□□□□ -0.72
GTF3A-206ENST00000470606 NBPF14Q5TI25 921 aa10.57□□□□□ -0.72
GTF3A-206ENST00000470606 NBPF10Q6P3W6 841 aaKnown RBP10.57□□□□□ -0.72
GTF3A-206ENST00000470606 PTF1AQ7RTS3 328 aa10.57□□□□□ -0.72
GTF3A-206ENST00000470606 NBPF15Q8N660 670 aa10.57□□□□□ -0.72
GTF3A-206ENST00000470606 DBF4Q9UBU7 674 aaPredicted RBP10.57□□□□□ -0.72
GTF3A-206ENST00000470606 MEX3CQ5U5Q3 659 aaKnown RBP10.56□□□□□ -0.72
GTF3A-206ENST00000470606 SIRT2Q8IXJ6 389 aa10.56□□□□□ -0.72
GTF3A-206ENST00000470606 ATRNO75882 1429 aa10.56□□□□□ -0.72
GTF3A-206ENST00000470606 PI4KAP2A4QPH2 592 aa10.56□□□□□ -0.72
GTF3A-206ENST00000470606 KCNQ2O43526 872 aa10.56□□□□□ -0.72
GTF3A-206ENST00000470606 AAMPQ13685 434 aa10.56□□□□□ -0.72
GTF3A-206ENST00000470606 FAM182BQ5T319 152 aa10.56□□□□□ -0.72
GTF3A-206ENST00000470606 SLC4A10Q6U841 1118 aa10.56□□□□□ -0.72
GTF3A-206ENST00000470606 PI4KAP1Q8N8J0 262 aa10.56□□□□□ -0.72
GTF3A-206ENST00000470606 ACSBG1Q96GR2 724 aa10.56□□□□□ -0.72
GTF3A-206ENST00000470606 GJD4Q96KN9 370 aaPredicted RBP10.56□□□□□ -0.72
GTF3A-206ENST00000470606 MEIS3Q99687 375 aa10.56□□□□□ -0.72
GTF3A-206ENST00000470606 DDX21Q9NR30 783 aaKnown RBP eCLIP10.56□□□□□ -0.72
GTF3A-206ENST00000470606 MYL6BP14649 208 aa10.55□□□□□ -0.72
GTF3A-206ENST00000470606 SYTL4Q96C24 671 aaPredicted RBP10.55□□□□□ -0.72
GTF3A-206ENST00000470606 CENPQQ7L2Z9 268 aaPredicted RBP10.54□□□□□ -0.72
GTF3A-206ENST00000470606 ATP10DQ9P241 1426 aa10.54□□□□□ -0.72
GTF3A-206ENST00000470606 ONECUT3O60422 494 aaPredicted RBP10.54□□□□□ -0.72
GTF3A-206ENST00000470606 A1BGP04217 495 aa10.54□□□□□ -0.72
GTF3A-206ENST00000470606 AIMP1Q12904 312 aaKnown RBP10.53□□□□□ -0.72
GTF3A-206ENST00000470606 BEND3Q5T5X7 828 aa10.53□□□□□ -0.72
GTF3A-206ENST00000470606 DNAJC10Q8IXB1 793 aa10.53□□□□□ -0.72
GTF3A-206ENST00000470606 USP44Q9H0E7 712 aa10.53□□□□□ -0.72
GTF3A-206ENST00000470606 HYPKQ9NX55 129 aa10.53□□□□□ -0.72
GTF3A-206ENST00000470606 TJP1Q07157 1748 aa10.53□□□□□ -0.72
GTF3A-206ENST00000470606 PXDNLA1KZ92 1463 aa10.53□□□□□ -0.72
GTF3A-206ENST00000470606 CCT4P50991 539 aaKnown RBP10.52□□□□□ -0.72
GTF3A-206ENST00000470606 HDAC1Q13547 482 aaPredicted RBP10.52□□□□□ -0.72
GTF3A-206ENST00000470606 COPS6Q7L5N1 327 aa10.52□□□□□ -0.72
GTF3A-206ENST00000470606 XAGE3Q8WTP9 111 aa10.52□□□□□ -0.72
GTF3A-206ENST00000470606 DNAAF4Q8WXU2 420 aa10.52□□□□□ -0.72
GTF3A-206ENST00000470606 MAP3K2Q9Y2U5 619 aa10.52□□□□□ -0.72
GTF3A-206ENST00000470606 MYH14Q7Z406 1995 aaKnown RBP10.52□□□□□ -0.72
GTF3A-206ENST00000470606 KSR2Q6VAB6 950 aa10.52□□□□□ -0.73
GTF3A-206ENST00000470606 BRWD3Q6RI45 1802 aa10.52□□□□□ -0.73
GTF3A-206ENST00000470606 SBF2Q86WG5 1849 aa10.52□□□□□ -0.73
GTF3A-206ENST00000470606 RBM42Q9BTD8 480 aaKnown RBP10.51□□□□□ -0.73
GTF3A-206ENST00000470606 QTRT2Q9H974 415 aaKnown RBP10.51□□□□□ -0.73
GTF3A-206ENST00000470606 TRPC5Q9UL62 973 aaPredicted RBP10.51□□□□□ -0.73
GTF3A-206ENST00000470606 ARFGEF2Q9Y6D5 1785 aa10.51□□□□□ -0.73
GTF3A-206ENST00000470606 NUP188Q5SRE5 1749 aa10.51□□□□□ -0.73
GTF3A-206ENST00000470606 IGKV5-2P06315 115 aa10.5□□□□□ -0.73
GTF3A-206ENST00000470606 NBPF7P0C2Y1 421 aaPredicted RBP10.5□□□□□ -0.73
GTF3A-206ENST00000470606 TTLL7Q6ZT98 887 aa10.5□□□□□ -0.73
GTF3A-206ENST00000470606 VSIG10Q8N0Z9 540 aa10.5□□□□□ -0.73
GTF3A-206ENST00000470606 CHMP4AQ9BY43 222 aa10.5□□□□□ -0.73
GTF3A-206ENST00000470606 A0A0G2JS52 829 aa10.5□□□□□ -0.73
GTF3A-206ENST00000470606 CYP19A1P11511 503 aaPredicted RBP10.5□□□□□ -0.73
GTF3A-206ENST00000470606 MYT1Q01538 1121 aa10.5□□□□□ -0.73
GTF3A-206ENST00000470606 CWF19L2Q2TBE0 894 aaKnown RBP10.5□□□□□ -0.73
GTF3A-206ENST00000470606 CEP85Q6P2H3 762 aa10.5□□□□□ -0.73
GTF3A-206ENST00000470606 SMC5Q8IY18 1101 aa10.5□□□□□ -0.73
GTF3A-206ENST00000470606 SEPT12Q8IYM1 358 aa10.5□□□□□ -0.73
GTF3A-206ENST00000470606 BTAF1O14981 1849 aa10.49□□□□□ -0.73
GTF3A-206ENST00000470606 SRCIN1Q9C0H9 1055 aa10.49□□□□□ -0.73
GTF3A-206ENST00000470606 RWDD1Q9H446 243 aaPredicted RBP10.49□□□□□ -0.73
GTF3A-206ENST00000470606 TSHZ2Q9NRE2 1034 aa10.49□□□□□ -0.73
GTF3A-206ENST00000470606 ITPK1Q13572 414 aa10.48□□□□□ -0.73
GTF3A-206ENST00000470606 ANKRD13DQ6ZTN6 518 aa10.48□□□□□ -0.73
GTF3A-206ENST00000470606 ANKRD44Q8N8A2 993 aa10.48□□□□□ -0.73
GTF3A-206ENST00000470606 PDZRN3Q9UPQ7 1066 aa10.48□□□□□ -0.73
GTF3A-206ENST00000470606 ERBB4Q15303 1308 aa10.48□□□□□ -0.73
GTF3A-206ENST00000470606 KCNQ4P56696 695 aa10.48□□□□□ -0.73
GTF3A-206ENST00000470606 LRRFIP2Q9Y608 721 aaKnown RBP10.48□□□□□ -0.73
GTF3A-206ENST00000470606 NHSQ6T4R5 1651 aa10.48□□□□□ -0.73
GTF3A-206ENST00000470606 LOC102724428A0A0B4J2F2 783 aa10.47□□□□□ -0.73
GTF3A-206ENST00000470606 AFDNP55196 1824 aaKnown RBP10.47□□□□□ -0.73
GTF3A-206ENST00000470606 SIK1P57059 783 aa10.47□□□□□ -0.73
GTF3A-206ENST00000470606 PALLDQ8WX93 1383 aa10.47□□□□□ -0.73
GTF3A-206ENST00000470606 KAZALD1Q96I82 304 aa10.47□□□□□ -0.73
GTF3A-206ENST00000470606 CICQ96RK0 1608 aaPredicted RBP10.47□□□□□ -0.73
GTF3A-206ENST00000470606 METTL22Q9BUU2 404 aaPredicted RBP10.47□□□□□ -0.73
GTF3A-206ENST00000470606 ZBTB1Q9Y2K1 713 aa10.47□□□□□ -0.73
GTF3A-206ENST00000470606 COL5A3P25940 1745 aaPredicted RBP10.47□□□□□ -0.73
GTF3A-206ENST00000470606 PNMA6EA0A0J9YXQ4 647 aa10.46□□□□□ -0.73
GTF3A-206ENST00000470606 PDE4AP27815 886 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms