RNA–Protein interactions for RNA: ENST00000470408.5

UBE3C-205, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 5,197 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-205ENST00000470408 NPC1L1Q9UHC9 1359 aa11.22□□□□□ -0.61
UBE3C-205ENST00000470408 PCDH11XQ9BZA7 1347 aa11.21□□□□□ -0.61
UBE3C-205ENST00000470408 PCDH11YQ9BZA8 1340 aa11.21□□□□□ -0.61
UBE3C-205ENST00000470408 USP5P45974 858 aa11.21□□□□□ -0.61
UBE3C-205ENST00000470408 IL1RAPL2Q9NP60 686 aa11.21□□□□□ -0.61
UBE3C-205ENST00000470408 BAG3O95817 575 aa11.21□□□□□ -0.62
UBE3C-205ENST00000470408 ZGPATQ8N5A5 531 aaKnown RBP11.21□□□□□ -0.62
UBE3C-205ENST00000470408 MTMR7Q9Y216 660 aa11.21□□□□□ -0.62
UBE3C-205ENST00000470408 CRACR2BQ8N4Y2 399 aaPredicted RBP11.21□□□□□ -0.62
UBE3C-205ENST00000470408 C8orf37Q96NL8 207 aa11.21□□□□□ -0.62
UBE3C-205ENST00000470408 EDC4Q6P2E9 1401 aaKnown RBP11.2□□□□□ -0.62
UBE3C-205ENST00000470408 POLR3DP05423 398 aaPredicted RBP11.2□□□□□ -0.62
UBE3C-205ENST00000470408 EPS15P42566 896 aa11.2□□□□□ -0.62
UBE3C-205ENST00000470408 GSTO1P78417 241 aa11.2□□□□□ -0.62
UBE3C-205ENST00000470408 NBPF6Q5VWK0 638 aa11.2□□□□□ -0.62
UBE3C-205ENST00000470408 NBPF5PQ86XG9 351 aaPredicted RBP11.2□□□□□ -0.62
UBE3C-205ENST00000470408 NBPF4Q96M43 638 aa11.2□□□□□ -0.62
UBE3C-205ENST00000470408 MAP3K2Q9Y2U5 619 aa11.2□□□□□ -0.62
UBE3C-205ENST00000470408 EIF4A2Q14240 407 aaKnown RBP11.2□□□□□ -0.62
UBE3C-205ENST00000470408 BMP2KQ9NSY1 1161 aaPredicted RBP11.2□□□□□ -0.62
UBE3C-205ENST00000470408 DACH1Q9UI36 760 aa11.2□□□□□ -0.62
UBE3C-205ENST00000470408 CIZ1Q9ULV3 898 aaPredicted RBP11.2□□□□□ -0.62
UBE3C-205ENST00000470408 PRKCSHP14314 528 aaPredicted RBP11.2□□□□□ -0.62
UBE3C-205ENST00000470408 LDHAL6AQ6ZMR3 332 aa11.2□□□□□ -0.62
UBE3C-205ENST00000470408 SETDB2Q96T68 719 aa11.2□□□□□ -0.62
UBE3C-205ENST00000470408 NAPBQ9H115 298 aa11.2□□□□□ -0.62
UBE3C-205ENST00000470408 MBIPQ9NS73 344 aa11.2□□□□□ -0.62
UBE3C-205ENST00000470408 PDRG1Q9NUG6 133 aa11.2□□□□□ -0.62
UBE3C-205ENST00000470408 POLKQ9UBT6 870 aa11.2□□□□□ -0.62
UBE3C-205ENST00000470408 ZBTB3Q9H5J0 574 aa11.2□□□□□ -0.62
UBE3C-205ENST00000470408 EXOC6BQ9Y2D4 811 aa11.2□□□□□ -0.62
UBE3C-205ENST00000470408 STIM1Q13586 685 aa11.19□□□□□ -0.62
UBE3C-205ENST00000470408 NLRP3Q96P20 1036 aa11.19□□□□□ -0.62
UBE3C-205ENST00000470408 ACBD3Q9H3P7 528 aa11.19□□□□□ -0.62
UBE3C-205ENST00000470408 KRT18P05783 430 aaKnown RBP11.19□□□□□ -0.62
UBE3C-205ENST00000470408 FILIP1LQ4L180 1135 aa11.19□□□□□ -0.62
UBE3C-205ENST00000470408 TRAF1Q13077 416 aa11.19□□□□□ -0.62
UBE3C-205ENST00000470408 IQCA1Q86XH1 822 aa11.19□□□□□ -0.62
UBE3C-205ENST00000470408 CCAR2Q8N163 923 aaKnown RBP11.19□□□□□ -0.62
UBE3C-205ENST00000470408 MKNK2Q9HBH9 465 aa11.19□□□□□ -0.62
UBE3C-205ENST00000470408 ECHDC1Q9NTX5 307 aa11.19□□□□□ -0.62
UBE3C-205ENST00000470408 C6orf229H3BNL8 230 aa11.19□□□□□ -0.62
UBE3C-205ENST00000470408 ATP6V1AP38606 617 aa11.19□□□□□ -0.62
UBE3C-205ENST00000470408 EVI5LQ96CN4 794 aa11.19□□□□□ -0.62
UBE3C-205ENST00000470408 CWC15Q9P013 229 aaKnown RBP11.19□□□□□ -0.62
UBE3C-205ENST00000470408 CFAP45Q9UL16 551 aa11.19□□□□□ -0.62
UBE3C-205ENST00000470408 LRRFIP2Q9Y608 721 aaKnown RBP11.19□□□□□ -0.62
UBE3C-205ENST00000470408 KRT85P78386 507 aa11.18□□□□□ -0.62
UBE3C-205ENST00000470408 CCDC178Q5BJE1 867 aa11.18□□□□□ -0.62
UBE3C-205ENST00000470408 BACH2Q9BYV9 841 aa11.18□□□□□ -0.62
UBE3C-205ENST00000470408 CEP131Q9UPN4 1083 aa11.18□□□□□ -0.62
UBE3C-205ENST00000470408 OFD1O75665 1012 aa11.18□□□□□ -0.62
UBE3C-205ENST00000470408 NUP133Q8WUM0 1156 aa11.18□□□□□ -0.62
UBE3C-205ENST00000470408 POLD1P28340 1107 aa11.18□□□□□ -0.62
UBE3C-205ENST00000470408 TNIP1Q15025 636 aa11.18□□□□□ -0.62
UBE3C-205ENST00000470408 CWC27Q6UX04 472 aaKnown RBP11.18□□□□□ -0.62
UBE3C-205ENST00000470408 KSR2Q6VAB6 950 aa11.18□□□□□ -0.62
UBE3C-205ENST00000470408 TESK2Q96S53 571 aa11.18□□□□□ -0.62
UBE3C-205ENST00000470408 ABCA8O94911 1581 aa11.18□□□□□ -0.62
UBE3C-205ENST00000470408 SBNO1A3KN83 1393 aa11.18□□□□□ -0.62
UBE3C-205ENST00000470408 MAP3K5Q99683 1374 aa11.18□□□□□ -0.62
UBE3C-205ENST00000470408 PI4KAP2A4QPH2 592 aa11.18□□□□□ -0.62
UBE3C-205ENST00000470408 ZFYP08048 801 aaPredicted RBP11.18□□□□□ -0.62
UBE3C-205ENST00000470408 PI4KAP1Q8N8J0 262 aa11.18□□□□□ -0.62
UBE3C-205ENST00000470408 CNKSR2Q8WXI2 1034 aa11.18□□□□□ -0.62
UBE3C-205ENST00000470408 CCDC85AQ96PX6 553 aaPredicted RBP11.18□□□□□ -0.62
UBE3C-205ENST00000470408 PLEKHG3A1L390 1219 aa11.17□□□□□ -0.62
UBE3C-205ENST00000470408 K7ELQ4 463 aaPredicted RBP11.17□□□□□ -0.62
UBE3C-205ENST00000470408 CCDC184Q52MB2 194 aa11.17□□□□□ -0.62
UBE3C-205ENST00000470408 ZNF444Q8N0Y2 327 aaPredicted RBP11.17□□□□□ -0.62
UBE3C-205ENST00000470408 MAGEC2Q9UBF1 373 aaPredicted RBP11.17□□□□□ -0.62
UBE3C-205ENST00000470408 MLH3Q9UHC1 1453 aa11.17□□□□□ -0.62
UBE3C-205ENST00000470408 PARD3Q8TEW0 1356 aa11.17□□□□□ -0.62
UBE3C-205ENST00000470408 HOXB7P09629 217 aa11.17□□□□□ -0.62
UBE3C-205ENST00000470408 TPTE2Q6XPS3 522 aa11.17□□□□□ -0.62
UBE3C-205ENST00000470408 HOMER1Q86YM7 354 aa11.17□□□□□ -0.62
UBE3C-205ENST00000470408 JAKMIP1Q96N16 626 aaKnown RBP11.17□□□□□ -0.62
UBE3C-205ENST00000470408 SH2B1Q9NRF2 756 aaPredicted RBP11.17□□□□□ -0.62
UBE3C-205ENST00000470408 RTCBQ9Y3I0 505 aaKnown RBP11.17□□□□□ -0.62
UBE3C-205ENST00000470408 PZPP20742 1482 aa11.17□□□□□ -0.62
UBE3C-205ENST00000470408 TMEM132AQ24JP5 1023 aa11.17□□□□□ -0.62
UBE3C-205ENST00000470408 ANKRD18AQ8IVF6 992 aa11.17□□□□□ -0.62
UBE3C-205ENST00000470408 EHMT1Q9H9B1 1298 aa11.17□□□□□ -0.62
UBE3C-205ENST00000470408 SEC63Q9UGP8 760 aaKnown RBP11.17□□□□□ -0.62
UBE3C-205ENST00000470408 GPTP24298 496 aa11.17□□□□□ -0.62
UBE3C-205ENST00000470408 MYO1BO43795 1136 aa11.16□□□□□ -0.62
UBE3C-205ENST00000470408 HOXC9P31274 260 aa11.16□□□□□ -0.62
UBE3C-205ENST00000470408 FOSBP53539 338 aa11.16□□□□□ -0.62
UBE3C-205ENST00000470408 LARP1BQ659C4 914 aaKnown RBP11.16□□□□□ -0.62
UBE3C-205ENST00000470408 CTCFLQ8NI51 663 aaPredicted RBP11.16□□□□□ -0.62
UBE3C-205ENST00000470408 PHAXQ9H814 394 aaKnown RBP11.16□□□□□ -0.62
UBE3C-205ENST00000470408 HLA-DOAP06340 250 aa11.16□□□□□ -0.62
UBE3C-205ENST00000470408 RDXP35241 583 aaKnown RBP11.16□□□□□ -0.62
UBE3C-205ENST00000470408 UBE3BQ7Z3V4 1068 aa11.16□□□□□ -0.62
UBE3C-205ENST00000470408 NUTM1Q86Y26 1132 aa11.16□□□□□ -0.62
UBE3C-205ENST00000470408 LINS1Q8NG48 757 aa11.16□□□□□ -0.62
UBE3C-205ENST00000470408 HDAC9Q9UKV0 1011 aa11.16□□□□□ -0.62
UBE3C-205ENST00000470408 TRIM27P14373 513 aa11.16□□□□□ -0.62
UBE3C-205ENST00000470408 ATP2B1P20020 1258 aa11.16□□□□□ -0.62
UBE3C-205ENST00000470408 CT47A1Q5JQC4 288 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms