RNA–Protein interactions for RNA: ENST00000468839.1

CRAMP1-206, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 451 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-206ENST00000468839 FKBP5Q13451 457 aaPredicted RBP18.99■□□□□ 0.63
CRAMP1-206ENST00000468839 PHAXQ9H814 394 aaKnown RBP18.99■□□□□ 0.63
CRAMP1-206ENST00000468839 HYPKQ9NX55 129 aa18.99■□□□□ 0.63
CRAMP1-206ENST00000468839 IGHDP01880 384 aa18.98■□□□□ 0.63
CRAMP1-206ENST00000468839 MEX3CQ5U5Q3 659 aaKnown RBP18.98■□□□□ 0.63
CRAMP1-206ENST00000468839 PIGBQ92521 554 aa18.98■□□□□ 0.63
CRAMP1-206ENST00000468839 BCL9O00512 1426 aa18.98■□□□□ 0.63
CRAMP1-206ENST00000468839 PDIA6Q15084 440 aa18.97■□□□□ 0.63
CRAMP1-206ENST00000468839 MARCH10Q8NA82 808 aaPredicted RBP18.97■□□□□ 0.63
CRAMP1-206ENST00000468839 RWDD1Q9H446 243 aaPredicted RBP18.97■□□□□ 0.63
CRAMP1-206ENST00000468839 USP16Q9Y5T5 823 aa18.97■□□□□ 0.63
CRAMP1-206ENST00000468839 ERBB4Q15303 1308 aa18.97■□□□□ 0.63
CRAMP1-206ENST00000468839 F6X3S4 739 aa18.96■□□□□ 0.63
CRAMP1-206ENST00000468839 HDAC1Q13547 482 aaPredicted RBP18.96■□□□□ 0.63
CRAMP1-206ENST00000468839 ATRNO75882 1429 aa18.95■□□□□ 0.62
CRAMP1-206ENST00000468839 VSIG10Q8N0Z9 540 aa18.95■□□□□ 0.62
CRAMP1-206ENST00000468839 AFF2P51816 1311 aa18.95■□□□□ 0.62
CRAMP1-206ENST00000468839 FAM98CQ17RN3 349 aaKnown RBP18.94■□□□□ 0.62
CRAMP1-206ENST00000468839 ATG3Q9NT62 314 aa18.94■□□□□ 0.62
CRAMP1-206ENST00000468839 ANXA1P04083 346 aa18.93■□□□□ 0.62
CRAMP1-206ENST00000468839 PROSER3Q2NL68 480 aa18.93■□□□□ 0.62
CRAMP1-206ENST00000468839 SLC4A10Q6U841 1118 aa18.93■□□□□ 0.62
CRAMP1-206ENST00000468839 TEX13AQ9BXU3 409 aaPredicted RBP18.93■□□□□ 0.62
CRAMP1-206ENST00000468839 ATP10DQ9P241 1426 aa18.92■□□□□ 0.62
CRAMP1-206ENST00000468839 PRIM1P49642 420 aaKnown RBP18.92■□□□□ 0.62
CRAMP1-206ENST00000468839 KSR2Q6VAB6 950 aa18.92■□□□□ 0.62
CRAMP1-206ENST00000468839 DNAAF4Q8WXU2 420 aa18.92■□□□□ 0.62
CRAMP1-206ENST00000468839 GJD4Q96KN9 370 aaPredicted RBP18.92■□□□□ 0.62
CRAMP1-206ENST00000468839 ASAP1Q9ULH1 1129 aa18.92■□□□□ 0.62
CRAMP1-206ENST00000468839 SBF2Q86WG5 1849 aa18.92■□□□□ 0.62
CRAMP1-206ENST00000468839 ADCY9O60503 1353 aa18.92■□□□□ 0.62
CRAMP1-206ENST00000468839 ONECUT3O60422 494 aaPredicted RBP18.91■□□□□ 0.62
CRAMP1-206ENST00000468839 LRP10Q7Z4F1 713 aa18.91■□□□□ 0.62
CRAMP1-206ENST00000468839 TRPC5Q9UL62 973 aaPredicted RBP18.91■□□□□ 0.62
CRAMP1-206ENST00000468839 CICQ96RK0 1608 aaPredicted RBP18.91■□□□□ 0.62
CRAMP1-206ENST00000468839 TJP1Q07157 1748 aa18.91■□□□□ 0.62
CRAMP1-206ENST00000468839 ARFGEF2Q9Y6D5 1785 aa18.91■□□□□ 0.62
CRAMP1-206ENST00000468839 ZNF831Q5JPB2 1677 aa18.9■□□□□ 0.62
CRAMP1-206ENST00000468839 PI4KAP2A4QPH2 592 aa18.9■□□□□ 0.62
CRAMP1-206ENST00000468839 PTCD1O75127 700 aaKnown RBP18.9■□□□□ 0.62
CRAMP1-206ENST00000468839 DDX58O95786 925 aaKnown RBP18.9■□□□□ 0.62
CRAMP1-206ENST00000468839 PI4KAP1Q8N8J0 262 aa18.9■□□□□ 0.62
CRAMP1-206ENST00000468839 AFDNP55196 1824 aaKnown RBP18.9■□□□□ 0.62
CRAMP1-206ENST00000468839 MEIS3Q99687 375 aa18.89■□□□□ 0.61
CRAMP1-206ENST00000468839 SRCIN1Q9C0H9 1055 aa18.89■□□□□ 0.61
CRAMP1-206ENST00000468839 IBTKQ9P2D0 1353 aaPredicted RBP18.89■□□□□ 0.61
CRAMP1-206ENST00000468839 GNAI3P08754 354 aa18.88■□□□□ 0.61
CRAMP1-206ENST00000468839 BEND3Q5T5X7 828 aa18.88■□□□□ 0.61
CRAMP1-206ENST00000468839 RPAP2Q8IXW5 612 aaPredicted RBP18.88■□□□□ 0.61
CRAMP1-206ENST00000468839 NUP188Q5SRE5 1749 aa18.88■□□□□ 0.61
CRAMP1-206ENST00000468839 ALDH1L1O75891 902 aa18.87■□□□□ 0.61
CRAMP1-206ENST00000468839 SMC5Q8IY18 1101 aa18.87■□□□□ 0.61
CRAMP1-206ENST00000468839 NHSQ6T4R5 1651 aa18.86■□□□□ 0.61
CRAMP1-206ENST00000468839 NBPF26B4DH59 902 aa18.86■□□□□ 0.61
CRAMP1-206ENST00000468839 MYL6BP14649 208 aa18.86■□□□□ 0.61
CRAMP1-206ENST00000468839 NBPF14Q5TI25 921 aa18.86■□□□□ 0.61
CRAMP1-206ENST00000468839 NBPF10Q6P3W6 841 aaKnown RBP18.86■□□□□ 0.61
CRAMP1-206ENST00000468839 COPS6Q7L5N1 327 aa18.86■□□□□ 0.61
CRAMP1-206ENST00000468839 NBPF15Q8N660 670 aa18.86■□□□□ 0.61
CRAMP1-206ENST00000468839 ANKRD44Q8N8A2 993 aa18.86■□□□□ 0.61
CRAMP1-206ENST00000468839 XAGE3Q8WTP9 111 aa18.86■□□□□ 0.61
CRAMP1-206ENST00000468839 SYTL4Q96C24 671 aaPredicted RBP18.86■□□□□ 0.61
CRAMP1-206ENST00000468839 MAP3K2Q9Y2U5 619 aa18.86■□□□□ 0.61
CRAMP1-206ENST00000468839 SIRT2Q8IXJ6 389 aa18.85■□□□□ 0.61
CRAMP1-206ENST00000468839 ACSBG1Q96GR2 724 aa18.85■□□□□ 0.61
CRAMP1-206ENST00000468839 RBM42Q9BTD8 480 aaKnown RBP18.85■□□□□ 0.61
CRAMP1-206ENST00000468839 USP44Q9H0E7 712 aa18.85■□□□□ 0.61
CRAMP1-206ENST00000468839 C1orf115Q9H7X2 142 aa18.85■□□□□ 0.61
CRAMP1-206ENST00000468839 BTAF1O14981 1849 aa18.85■□□□□ 0.61
CRAMP1-206ENST00000468839 BRWD3Q6RI45 1802 aa18.85■□□□□ 0.61
CRAMP1-206ENST00000468839 A1BGP04217 495 aa18.84■□□□□ 0.61
CRAMP1-206ENST00000468839 GNAI2P04899 355 aa18.84■□□□□ 0.61
CRAMP1-206ENST00000468839 AIMP1Q12904 312 aaKnown RBP18.84■□□□□ 0.61
CRAMP1-206ENST00000468839 ANKRD13DQ6ZTN6 518 aa18.84■□□□□ 0.61
CRAMP1-206ENST00000468839 DNAJC10Q8IXB1 793 aa18.84■□□□□ 0.61
CRAMP1-206ENST00000468839 SMARCC1Q92922 1105 aaPredicted RBP18.84■□□□□ 0.61
CRAMP1-206ENST00000468839 QTRT2Q9H974 415 aaKnown RBP18.84■□□□□ 0.61
CRAMP1-206ENST00000468839 RREB1Q92766 1687 aa18.83■□□□□ 0.61
CRAMP1-206ENST00000468839 STARD3NLO95772 234 aa18.83■□□□□ 0.6
CRAMP1-206ENST00000468839 RIC3Q7Z5B4 369 aa18.83■□□□□ 0.6
CRAMP1-206ENST00000468839 LINS1Q8NG48 757 aa18.83■□□□□ 0.6
CRAMP1-206ENST00000468839 SLC4A9Q96Q91 983 aa18.83■□□□□ 0.6
CRAMP1-206ENST00000468839 METTL22Q9BUU2 404 aaPredicted RBP18.83■□□□□ 0.6
CRAMP1-206ENST00000468839 CEP85Q6P2H3 762 aa18.82■□□□□ 0.6
CRAMP1-206ENST00000468839 GCC1Q96CN9 775 aa18.82■□□□□ 0.6
CRAMP1-206ENST00000468839 PDZRN3Q9UPQ7 1066 aa18.82■□□□□ 0.6
CRAMP1-206ENST00000468839 COL5A3P25940 1745 aaPredicted RBP18.82■□□□□ 0.6
CRAMP1-206ENST00000468839 MYH14Q7Z406 1995 aaKnown RBP18.81■□□□□ 0.6
CRAMP1-206ENST00000468839 CYP19A1P11511 503 aaPredicted RBP18.81■□□□□ 0.6
CRAMP1-206ENST00000468839 PLBD2Q8NHP8 589 aa18.81■□□□□ 0.6
CRAMP1-206ENST00000468839 NUP98P52948 1817 aa18.8■□□□□ 0.6
CRAMP1-206ENST00000468839 A0A0G2JS52 829 aa18.8■□□□□ 0.6
CRAMP1-206ENST00000468839 UBTFL1P0CB47 393 aaPredicted RBP18.8■□□□□ 0.6
CRAMP1-206ENST00000468839 PIP4K2AP48426 406 aaPredicted RBP18.8■□□□□ 0.6
CRAMP1-206ENST00000468839 MYT1Q01538 1121 aa18.8■□□□□ 0.6
CRAMP1-206ENST00000468839 HDAC5Q9UQL6 1122 aa18.8■□□□□ 0.6
CRAMP1-206ENST00000468839 UTYO14607 1347 aa18.79■□□□□ 0.6
CRAMP1-206ENST00000468839 KCNQ2O43526 872 aa18.79■□□□□ 0.6
CRAMP1-206ENST00000468839 ATP8B2P98198 1209 aa18.79■□□□□ 0.6
CRAMP1-206ENST00000468839 NEXNQ0ZGT2 675 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms