RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 TNRC6CQ9HCJ0 1690 aaKnown RBP21.34■■□□□ 1.01
TSSC4-208ENST00000467308 CYP19A1P11511 503 aaPredicted RBP21.33■■□□□ 1.01
TSSC4-208ENST00000467308 USPL1Q5W0Q7 1092 aa21.33■■□□□ 1.01
TSSC4-208ENST00000467308 AFDNP55196 1824 aaKnown RBP21.33■■□□□ 1.01
TSSC4-208ENST00000467308 NRXN2Q9P2S2 1712 aa21.32■■□□□ 1
TSSC4-208ENST00000467308 ZC3H4Q9UPT8 1303 aaKnown RBP21.32■■□□□ 1
TSSC4-208ENST00000467308 LGR6Q9HBX8 967 aa21.32■■□□□ 1
TSSC4-208ENST00000467308 NARFQ9UHQ1 456 aa21.32■■□□□ 1
TSSC4-208ENST00000467308 ZNF316A6NFI3 1004 aaPredicted RBP21.31■■□□□ 1
TSSC4-208ENST00000467308 AMER1Q5JTC6 1135 aaPredicted RBP21.31■■□□□ 1
TSSC4-208ENST00000467308 RNMTO43148 476 aaKnown RBP21.3■■□□□ 1
TSSC4-208ENST00000467308 NFIXQ14938 502 aa21.3■■□□□ 1
TSSC4-208ENST00000467308 VSIG10Q8N0Z9 540 aa21.3■■□□□ 1
TSSC4-208ENST00000467308 COL15A1P39059 1388 aa21.3■■□□□ 1
TSSC4-208ENST00000467308 DLEC1Q9Y238 1755 aa21.3■■□□□ 1
TSSC4-208ENST00000467308 SLC39A6Q13433 755 aa21.28■■□□□ 1
TSSC4-208ENST00000467308 KLRG1Q96E93 195 aa21.28■■□□□ 1
TSSC4-208ENST00000467308 RRAGCQ9HB90 399 aa21.28■■□□□ 1
TSSC4-208ENST00000467308 ZBTB1Q9Y2K1 713 aa21.28■■□□□ 1
TSSC4-208ENST00000467308 JMYQ8N9B5 988 aa21.27■■□□□ 1
TSSC4-208ENST00000467308 UBR2Q8IWV8 1755 aa21.27■■□□□ 1
TSSC4-208ENST00000467308 HMOX1P09601 288 aa21.26■□□□□ 0.99
TSSC4-208ENST00000467308 BCL2L12Q9HB09 334 aa21.26■□□□□ 0.99
TSSC4-208ENST00000467308 PCNTO95613 3336 aa21.25■□□□□ 0.99
TSSC4-208ENST00000467308 SERPINB2P05120 415 aa21.25■□□□□ 0.99
TSSC4-208ENST00000467308 LMNB1P20700 586 aa21.25■□□□□ 0.99
TSSC4-208ENST00000467308 MTHFSDQ2M296 383 aaKnown RBP21.25■□□□□ 0.99
TSSC4-208ENST00000467308 SMC1BQ8NDV3 1235 aa21.25■□□□□ 0.99
TSSC4-208ENST00000467308 HTRA3P83110 453 aa21.24■□□□□ 0.99
TSSC4-208ENST00000467308 RASSF7Q02833 373 aa21.24■□□□□ 0.99
TSSC4-208ENST00000467308 TTLL6Q8N841 843 aa21.24■□□□□ 0.99
TSSC4-208ENST00000467308 CCDC88AQ3V6T2 1871 aa21.22■□□□□ 0.99
TSSC4-208ENST00000467308 GLTPD2A6NH11 291 aa21.22■□□□□ 0.99
TSSC4-208ENST00000467308 DIAPH1O60610 1272 aaKnown RBP21.22■□□□□ 0.99
TSSC4-208ENST00000467308 H0YIN7 160 aa21.21■□□□□ 0.99
TSSC4-208ENST00000467308 STARD3NLO95772 234 aa21.21■□□□□ 0.99
TSSC4-208ENST00000467308 VEGFAP15692 232 aaPredicted RBP21.21■□□□□ 0.99
TSSC4-208ENST00000467308 EIF5P55010 431 aaKnown RBP21.21■□□□□ 0.99
TSSC4-208ENST00000467308 C2CD5Q86YS7 1000 aa21.21■□□□□ 0.99
TSSC4-208ENST00000467308 A0A087WZG4 1122 aa21.2■□□□□ 0.98
TSSC4-208ENST00000467308 CANXP27824 592 aaKnown RBP21.2■□□□□ 0.98
TSSC4-208ENST00000467308 TTC5Q8N0Z6 440 aa21.2■□□□□ 0.98
TSSC4-208ENST00000467308 TIAM2Q8IVF5 1701 aa21.2■□□□□ 0.98
TSSC4-208ENST00000467308 PRELPP51888 382 aa21.19■□□□□ 0.98
TSSC4-208ENST00000467308 PDZRN3Q9UPQ7 1066 aa21.19■□□□□ 0.98
TSSC4-208ENST00000467308 KIF7Q2M1P5 1343 aa21.19■□□□□ 0.98
TSSC4-208ENST00000467308 CARMIL3Q8ND23 1372 aa21.19■□□□□ 0.98
TSSC4-208ENST00000467308 PER1O15534 1290 aaPredicted RBP21.18■□□□□ 0.98
TSSC4-208ENST00000467308 NFKBIEO00221 500 aa21.17■□□□□ 0.98
TSSC4-208ENST00000467308 TEX13AQ9BXU3 409 aaPredicted RBP21.17■□□□□ 0.98
TSSC4-208ENST00000467308 SCN7AQ01118 1682 aa21.17■□□□□ 0.98
TSSC4-208ENST00000467308 ANKRD31Q8N7Z5 1873 aa21.17■□□□□ 0.98
TSSC4-208ENST00000467308 SIPA1L3O60292 1781 aaPredicted RBP21.16■□□□□ 0.98
TSSC4-208ENST00000467308 BRIP1Q9BX63 1249 aa21.16■□□□□ 0.98
TSSC4-208ENST00000467308 HEG1Q9ULI3 1381 aa21.15■□□□□ 0.98
TSSC4-208ENST00000467308 PDE6BP35913 854 aa21.15■□□□□ 0.98
TSSC4-208ENST00000467308 ZNF790Q6PG37 636 aa21.15■□□□□ 0.98
TSSC4-208ENST00000467308 BICDL1Q6ZP65 573 aa21.15■□□□□ 0.98
TSSC4-208ENST00000467308 ZNF496Q96IT1 587 aaPredicted RBP21.15■□□□□ 0.98
TSSC4-208ENST00000467308 DICER1Q9UPY3 1922 aaKnown RBP21.15■□□□□ 0.98
TSSC4-208ENST00000467308 FER1L6Q2WGJ9 1857 aa21.14■□□□□ 0.97
TSSC4-208ENST00000467308 TEFQ10587 303 aa21.14■□□□□ 0.97
TSSC4-208ENST00000467308 CC2D1BQ5T0F9 858 aaKnown RBP21.14■□□□□ 0.97
TSSC4-208ENST00000467308 COL13A1Q5TAT6 717 aaPredicted RBP21.14■□□□□ 0.97
TSSC4-208ENST00000467308 TBC1D9BQ66K14 1250 aa21.14■□□□□ 0.97
TSSC4-208ENST00000467308 GAS2L2Q8NHY3 880 aa21.14■□□□□ 0.97
TSSC4-208ENST00000467308 COL3A1P02461 1466 aaPredicted RBP21.13■□□□□ 0.97
TSSC4-208ENST00000467308 GNAT3A8MTJ3 354 aa21.13■□□□□ 0.97
TSSC4-208ENST00000467308 IL6STP40189 918 aaPredicted RBP21.13■□□□□ 0.97
TSSC4-208ENST00000467308 DPY19L2Q6NUT2 758 aa21.13■□□□□ 0.97
TSSC4-208ENST00000467308 IL17REQ8NFR9 667 aa21.13■□□□□ 0.97
TSSC4-208ENST00000467308 NPC1L1Q9UHC9 1359 aa21.12■□□□□ 0.97
TSSC4-208ENST00000467308 ZNF622Q969S3 477 aaKnown RBP eCLIP21.12■□□□□ 0.97
TSSC4-208ENST00000467308 COL11A2P13942 1736 aaPredicted RBP21.12■□□□□ 0.97
TSSC4-208ENST00000467308 PRR5LQ6MZQ0 368 aa21.11■□□□□ 0.97
TSSC4-208ENST00000467308 POTECB2RU33 542 aa21.1■□□□□ 0.97
TSSC4-208ENST00000467308 FMNL2Q96PY5 1086 aa21.1■□□□□ 0.97
TSSC4-208ENST00000467308 TBC1D2BQ9UPU7 963 aa21.1■□□□□ 0.97
TSSC4-208ENST00000467308 CEMIPQ8WUJ3 1361 aa21.1■□□□□ 0.97
TSSC4-208ENST00000467308 LTBP3Q9NS15 1303 aa21.09■□□□□ 0.97
TSSC4-208ENST00000467308 U2SURPO15042 1029 aaKnown RBP21.09■□□□□ 0.97
TSSC4-208ENST00000467308 C21orf2O43822 256 aa21.09■□□□□ 0.97
TSSC4-208ENST00000467308 ERFEQ4G0M1 354 aa21.09■□□□□ 0.97
TSSC4-208ENST00000467308 SETDB2Q96T68 719 aa21.09■□□□□ 0.97
TSSC4-208ENST00000467308 ZNF330Q9Y3S2 320 aaPredicted RBP21.09■□□□□ 0.97
TSSC4-208ENST00000467308 NPM2Q86SE8 214 aaKnown RBP21.08■□□□□ 0.97
TSSC4-208ENST00000467308 CAMTA2O94983 1202 aa21.07■□□□□ 0.96
TSSC4-208ENST00000467308 CNBD1Q8NA66 436 aa21.07■□□□□ 0.96
TSSC4-208ENST00000467308 CNKSR1Q969H4 720 aa21.07■□□□□ 0.96
TSSC4-208ENST00000467308 TAOK3Q9H2K8 898 aa21.07■□□□□ 0.96
TSSC4-208ENST00000467308 BCORQ6W2J9 1755 aa21.07■□□□□ 0.96
TSSC4-208ENST00000467308 ARFGEF2Q9Y6D5 1785 aa21.07■□□□□ 0.96
TSSC4-208ENST00000467308 A1BGP04217 495 aa21.06■□□□□ 0.96
TSSC4-208ENST00000467308 STYK1Q6J9G0 422 aa21.06■□□□□ 0.96
TSSC4-208ENST00000467308 SLX4Q8IY92 1834 aa21.06■□□□□ 0.96
TSSC4-208ENST00000467308 ST5P78524 1137 aa21.05■□□□□ 0.96
TSSC4-208ENST00000467308 SOGA3Q5TF21 947 aa21.05■□□□□ 0.96
TSSC4-208ENST00000467308 TNS4Q8IZW8 715 aa21.05■□□□□ 0.96
TSSC4-208ENST00000467308 CCDC24Q8N4L8 307 aa21.05■□□□□ 0.96
TSSC4-208ENST00000467308 ZNF219Q9P2Y4 722 aaPredicted RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms