RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 SCN11AQ9UI33 1791 aa9.41□□□□□ -0.9
EPHA4-210ENST00000463446 THSD7AQ9UPZ6 1657 aa9.41□□□□□ -0.9
EPHA4-210ENST00000463446 MRC1P22897 1456 aa9.4□□□□□ -0.9
EPHA4-210ENST00000463446 KAT6BQ8WYB5 2073 aa9.4□□□□□ -0.9
EPHA4-210ENST00000463446 CCNL1Q9UK58 526 aaPredicted RBP9.4□□□□□ -0.9
EPHA4-210ENST00000463446 SUPT16HQ9Y5B9 1047 aaKnown RBP9.4□□□□□ -0.9
EPHA4-210ENST00000463446 PALLDQ8WX93 1383 aa9.39□□□□□ -0.91
EPHA4-210ENST00000463446 ADAMTS7Q9UKP4 1686 aa9.39□□□□□ -0.91
EPHA4-210ENST00000463446 KCNQ2O43526 872 aa9.39□□□□□ -0.91
EPHA4-210ENST00000463446 IL6STP40189 918 aaPredicted RBP9.39□□□□□ -0.91
EPHA4-210ENST00000463446 HSP90AB3PQ58FF7 597 aa9.39□□□□□ -0.91
EPHA4-210ENST00000463446 NBPF14Q5TI25 921 aa9.39□□□□□ -0.91
EPHA4-210ENST00000463446 ATF7IPQ6VMQ6 1270 aa9.39□□□□□ -0.91
EPHA4-210ENST00000463446 KIF6Q6ZMV9 814 aa9.39□□□□□ -0.91
EPHA4-210ENST00000463446 ANKRD13DQ6ZTN6 518 aa9.39□□□□□ -0.91
EPHA4-210ENST00000463446 TSPYL6Q8N831 410 aa9.39□□□□□ -0.91
EPHA4-210ENST00000463446 SSH1Q8WYL5 1049 aa9.39□□□□□ -0.91
EPHA4-210ENST00000463446 FRAT1Q92837 279 aaPredicted RBP9.39□□□□□ -0.91
EPHA4-210ENST00000463446 ZNF652Q9Y2D9 606 aa9.39□□□□□ -0.91
EPHA4-210ENST00000463446 USP16Q9Y5T5 823 aa9.39□□□□□ -0.91
EPHA4-210ENST00000463446 ERVV-1B6SEH8 477 aa9.38□□□□□ -0.91
EPHA4-210ENST00000463446 KCNQ3O43525 872 aa9.38□□□□□ -0.91
EPHA4-210ENST00000463446 CCT4P50991 539 aaKnown RBP9.38□□□□□ -0.91
EPHA4-210ENST00000463446 KSR2Q6VAB6 950 aa9.38□□□□□ -0.91
EPHA4-210ENST00000463446 RIC3Q7Z5B4 369 aa9.38□□□□□ -0.91
EPHA4-210ENST00000463446 MRPL50Q8N5N7 158 aaKnown RBP9.38□□□□□ -0.91
EPHA4-210ENST00000463446 CCDC87Q9NVE4 849 aa9.38□□□□□ -0.91
EPHA4-210ENST00000463446 NOB1Q9ULX3 412 aaKnown RBP9.38□□□□□ -0.91
EPHA4-210ENST00000463446 RTCBQ9Y3I0 505 aaKnown RBP9.38□□□□□ -0.91
EPHA4-210ENST00000463446 LRRC37A3O60309 1634 aa9.38□□□□□ -0.91
EPHA4-210ENST00000463446 WNK3Q9BYP7 1800 aa9.38□□□□□ -0.91
EPHA4-210ENST00000463446 CYP19A1P11511 503 aaPredicted RBP9.37□□□□□ -0.91
EPHA4-210ENST00000463446 FKBP5Q13451 457 aaPredicted RBP9.37□□□□□ -0.91
EPHA4-210ENST00000463446 TRAPPC3LQ5T215 181 aa9.37□□□□□ -0.91
EPHA4-210ENST00000463446 CLEC4GQ6UXB4 293 aa9.37□□□□□ -0.91
EPHA4-210ENST00000463446 DZIP1LQ8IYY4 767 aaKnown RBP9.37□□□□□ -0.91
EPHA4-210ENST00000463446 RNF123Q5XPI4 1314 aa9.36□□□□□ -0.91
EPHA4-210ENST00000463446 ZPR1O75312 459 aa9.36□□□□□ -0.91
EPHA4-210ENST00000463446 NPM3O75607 178 aaKnown RBP9.36□□□□□ -0.91
EPHA4-210ENST00000463446 RPS6KA4O75676 772 aa9.36□□□□□ -0.91
EPHA4-210ENST00000463446 BCAR3O75815 825 aa9.36□□□□□ -0.91
EPHA4-210ENST00000463446 RRP1P56182 461 aaKnown RBP9.36□□□□□ -0.91
EPHA4-210ENST00000463446 FLIIQ13045 1269 aa9.36□□□□□ -0.91
EPHA4-210ENST00000463446 TXNRD1Q16881 649 aa9.36□□□□□ -0.91
EPHA4-210ENST00000463446 DNAJC10Q8IXB1 793 aa9.36□□□□□ -0.91
EPHA4-210ENST00000463446 PLBD2Q8NHP8 589 aa9.36□□□□□ -0.91
EPHA4-210ENST00000463446 AK7Q96M32 723 aa9.36□□□□□ -0.91
EPHA4-210ENST00000463446 DDX19BQ9UMR2 479 aa9.36□□□□□ -0.91
EPHA4-210ENST00000463446 CNTNAP4Q9C0A0 1308 aa9.35□□□□□ -0.91
EPHA4-210ENST00000463446 ALDH1L1O75891 902 aa9.35□□□□□ -0.91
EPHA4-210ENST00000463446 GNAI3P08754 354 aa9.35□□□□□ -0.91
EPHA4-210ENST00000463446 RFC4P35249 363 aa9.35□□□□□ -0.91
EPHA4-210ENST00000463446 FAM182BQ5T319 152 aa9.35□□□□□ -0.91
EPHA4-210ENST00000463446 COPS6Q7L5N1 327 aa9.35□□□□□ -0.91
EPHA4-210ENST00000463446 ARXQ96QS3 562 aa9.35□□□□□ -0.91
EPHA4-210ENST00000463446 CHPF2Q9P2E5 772 aa9.35□□□□□ -0.91
EPHA4-210ENST00000463446 CACNA1FO60840 1977 aa9.34□□□□□ -0.91
EPHA4-210ENST00000463446 RGS12O14924 1447 aa9.34□□□□□ -0.91
EPHA4-210ENST00000463446 A1BGP04217 495 aa9.34□□□□□ -0.91
EPHA4-210ENST00000463446 MYL6BP14649 208 aa9.34□□□□□ -0.91
EPHA4-210ENST00000463446 SSFA2P28290 1259 aa9.34□□□□□ -0.91
EPHA4-210ENST00000463446 CRKLP46109 303 aaKnown RBP9.34□□□□□ -0.91
EPHA4-210ENST00000463446 INTS3Q68E01 1043 aaKnown RBP9.34□□□□□ -0.91
EPHA4-210ENST00000463446 DNAAF4Q8WXU2 420 aa9.34□□□□□ -0.91
EPHA4-210ENST00000463446 NECTIN2Q92692 538 aa9.34□□□□□ -0.91
EPHA4-210ENST00000463446 IBTKQ9P2D0 1353 aaPredicted RBP9.34□□□□□ -0.91
EPHA4-210ENST00000463446 PI4KAP2A4QPH2 592 aa9.33□□□□□ -0.92
EPHA4-210ENST00000463446 EIF5P55010 431 aaKnown RBP9.33□□□□□ -0.92
EPHA4-210ENST00000463446 AIMP1Q12904 312 aaKnown RBP9.33□□□□□ -0.92
EPHA4-210ENST00000463446 TRIM28Q13263 835 aaKnown RBP9.33□□□□□ -0.92
EPHA4-210ENST00000463446 KRT24Q2M2I5 525 aa9.33□□□□□ -0.92
EPHA4-210ENST00000463446 PI4KAP1Q8N8J0 262 aa9.33□□□□□ -0.92
EPHA4-210ENST00000463446 LINS1Q8NG48 757 aa9.33□□□□□ -0.92
EPHA4-210ENST00000463446 XAGE3Q8WTP9 111 aa9.33□□□□□ -0.92
EPHA4-210ENST00000463446 METTL22Q9BUU2 404 aaPredicted RBP9.33□□□□□ -0.92
EPHA4-210ENST00000463446 SRCIN1Q9C0H9 1055 aa9.33□□□□□ -0.92
EPHA4-210ENST00000463446 STK32BQ9NY57 414 aa9.33□□□□□ -0.92
EPHA4-210ENST00000463446 TFCP2L1Q9NZI6 479 aa9.33□□□□□ -0.92
EPHA4-210ENST00000463446 SHANK3Q9BYB0 1731 aa9.33□□□□□ -0.92
EPHA4-210ENST00000463446 ZNF831Q5JPB2 1677 aa9.32□□□□□ -0.92
EPHA4-210ENST00000463446 SIPA1L3O60292 1781 aaPredicted RBP9.32□□□□□ -0.92
EPHA4-210ENST00000463446 TRIM27P14373 513 aa9.32□□□□□ -0.92
EPHA4-210ENST00000463446 TCIRG1Q13488 830 aa9.32□□□□□ -0.92
EPHA4-210ENST00000463446 PDIA6Q15084 440 aa9.32□□□□□ -0.92
EPHA4-210ENST00000463446 PARP10Q53GL7 1025 aa9.32□□□□□ -0.92
EPHA4-210ENST00000463446 INTS5Q6P9B9 1019 aaKnown RBP9.32□□□□□ -0.92
EPHA4-210ENST00000463446 SLC4A10Q6U841 1118 aa9.32□□□□□ -0.92
EPHA4-210ENST00000463446 GIGYF2Q6Y7W6 1299 aaKnown RBP9.32□□□□□ -0.92
EPHA4-210ENST00000463446 PPP1R42Q7Z4L9 355 aa9.32□□□□□ -0.92
EPHA4-210ENST00000463446 DZIP3Q86Y13 1208 aaKnown RBP9.32□□□□□ -0.92
EPHA4-210ENST00000463446 NLGN1Q8N2Q7 840 aa9.32□□□□□ -0.92
EPHA4-210ENST00000463446 CCDC191Q8NCU4 936 aa9.32□□□□□ -0.92
EPHA4-210ENST00000463446 BCL2L13Q9BXK5 485 aa9.32□□□□□ -0.92
EPHA4-210ENST00000463446 C9orf78Q9NZ63 289 aaPredicted RBP9.32□□□□□ -0.92
EPHA4-210ENST00000463446 ITGB4P16144 1822 aa9.32□□□□□ -0.92
EPHA4-210ENST00000463446 KDM3BQ7LBC6 1761 aa9.32□□□□□ -0.92
EPHA4-210ENST00000463446 MVPQ14764 893 aaKnown RBP9.31□□□□□ -0.92
EPHA4-210ENST00000463446 ITPRIPQ8IWB1 547 aa9.31□□□□□ -0.92
EPHA4-210ENST00000463446 SLC16A10Q8TF71 515 aa9.31□□□□□ -0.92
EPHA4-210ENST00000463446 CAMKK2Q96RR4 588 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms