RNA–Protein interactions for RNA: ENST00000463084.1

COL4A2-204, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-204ENST00000463084 ZBTB1Q9Y2K1 713 aa17.61■□□□□ 0.41
COL4A2-204ENST00000463084 TJP1Q07157 1748 aa17.61■□□□□ 0.41
COL4A2-204ENST00000463084 MYH14Q7Z406 1995 aaKnown RBP17.6■□□□□ 0.41
COL4A2-204ENST00000463084 CYP19A1P11511 503 aaPredicted RBP17.6■□□□□ 0.41
COL4A2-204ENST00000463084 NPM2Q86SE8 214 aaKnown RBP17.6■□□□□ 0.41
COL4A2-204ENST00000463084 TEFQ10587 303 aa17.59■□□□□ 0.41
COL4A2-204ENST00000463084 NFIXQ14938 502 aa17.59■□□□□ 0.41
COL4A2-204ENST00000463084 NARFQ9UHQ1 456 aa17.59■□□□□ 0.41
COL4A2-204ENST00000463084 NPHP1O15259 732 aa17.58■□□□□ 0.4
COL4A2-204ENST00000463084 STARD3NLO95772 234 aa17.58■□□□□ 0.4
COL4A2-204ENST00000463084 TM4SF1P30408 202 aa17.58■□□□□ 0.4
COL4A2-204ENST00000463084 RASSF7Q02833 373 aa17.58■□□□□ 0.4
COL4A2-204ENST00000463084 SCN11AQ9UI33 1791 aa17.58■□□□□ 0.4
COL4A2-204ENST00000463084 KCPQ6ZWJ8 1503 aa17.57■□□□□ 0.4
COL4A2-204ENST00000463084 SERPINB2P05120 415 aa17.57■□□□□ 0.4
COL4A2-204ENST00000463084 RRAGCQ9HB90 399 aa17.57■□□□□ 0.4
COL4A2-204ENST00000463084 C2CD5Q86YS7 1000 aa17.56■□□□□ 0.4
COL4A2-204ENST00000463084 RBM46Q8TBY0 533 aaKnown RBP17.56■□□□□ 0.4
COL4A2-204ENST00000463084 A0A087WZG4 1122 aa17.55■□□□□ 0.4
COL4A2-204ENST00000463084 VSIG10Q8N0Z9 540 aa17.55■□□□□ 0.4
COL4A2-204ENST00000463084 MRC1P22897 1456 aa17.55■□□□□ 0.4
COL4A2-204ENST00000463084 H0YIN7 160 aa17.54■□□□□ 0.4
COL4A2-204ENST00000463084 TTLL6Q8N841 843 aa17.54■□□□□ 0.4
COL4A2-204ENST00000463084 GAS2L2Q8NHY3 880 aa17.54■□□□□ 0.4
COL4A2-204ENST00000463084 ZNF219Q9P2Y4 722 aaPredicted RBP17.54■□□□□ 0.4
COL4A2-204ENST00000463084 CEP350Q5VT06 3117 aa17.53■□□□□ 0.4
COL4A2-204ENST00000463084 GNAT3A8MTJ3 354 aa17.53■□□□□ 0.4
COL4A2-204ENST00000463084 ZNF622Q969S3 477 aaKnown RBP eCLIP17.53■□□□□ 0.4
COL4A2-204ENST00000463084 HTRA3P83110 453 aa17.52■□□□□ 0.4
COL4A2-204ENST00000463084 CFAP53Q96M91 514 aa17.52■□□□□ 0.4
COL4A2-204ENST00000463084 BRCA1P38398 1863 aaKnown RBP17.52■□□□□ 0.39
COL4A2-204ENST00000463084 ARFGEF1Q9Y6D6 1849 aa17.51■□□□□ 0.39
COL4A2-204ENST00000463084 LMNB1P20700 586 aa17.51■□□□□ 0.39
COL4A2-204ENST00000463084 FSTL1Q12841 308 aa17.51■□□□□ 0.39
COL4A2-204ENST00000463084 CCDC24Q8N4L8 307 aa17.51■□□□□ 0.39
COL4A2-204ENST00000463084 ZNF496Q96IT1 587 aaPredicted RBP17.51■□□□□ 0.39
COL4A2-204ENST00000463084 BCL2L12Q9HB09 334 aa17.51■□□□□ 0.39
COL4A2-204ENST00000463084 TBC1D2BQ9UPU7 963 aa17.51■□□□□ 0.39
COL4A2-204ENST00000463084 PER1O15534 1290 aaPredicted RBP17.5■□□□□ 0.39
COL4A2-204ENST00000463084 ZNF790Q6PG37 636 aa17.5■□□□□ 0.39
COL4A2-204ENST00000463084 SMC1BQ8NDV3 1235 aa17.5■□□□□ 0.39
COL4A2-204ENST00000463084 FMNL2Q96PY5 1086 aa17.5■□□□□ 0.39
COL4A2-204ENST00000463084 TEX13AQ9BXU3 409 aaPredicted RBP17.5■□□□□ 0.39
COL4A2-204ENST00000463084 TBC1D9BQ66K14 1250 aa17.49■□□□□ 0.39
COL4A2-204ENST00000463084 CARMIL3Q8ND23 1372 aa17.49■□□□□ 0.39
COL4A2-204ENST00000463084 HEG1Q9ULI3 1381 aa17.49■□□□□ 0.39
COL4A2-204ENST00000463084 BTBD11A6QL63 1104 aa17.48■□□□□ 0.39
COL4A2-204ENST00000463084 PDE6BP35913 854 aa17.48■□□□□ 0.39
COL4A2-204ENST00000463084 EIF5P55010 431 aaKnown RBP17.48■□□□□ 0.39
COL4A2-204ENST00000463084 IL17REQ8NFR9 667 aa17.48■□□□□ 0.39
COL4A2-204ENST00000463084 ADAMTS7Q9UKP4 1686 aa17.48■□□□□ 0.39
COL4A2-204ENST00000463084 PRKAR2BP31323 418 aa17.47■□□□□ 0.39
COL4A2-204ENST00000463084 SETDB2Q96T68 719 aa17.47■□□□□ 0.39
COL4A2-204ENST00000463084 NUDCQ9Y266 331 aa17.47■□□□□ 0.39
COL4A2-204ENST00000463084 ZC3H4Q9UPT8 1303 aaKnown RBP17.47■□□□□ 0.39
COL4A2-204ENST00000463084 C21orf2O43822 256 aa17.46■□□□□ 0.39
COL4A2-204ENST00000463084 A1BGP04217 495 aa17.46■□□□□ 0.39
COL4A2-204ENST00000463084 ST5P78524 1137 aa17.46■□□□□ 0.39
COL4A2-204ENST00000463084 DNAJC5GQ8N7S2 189 aa17.46■□□□□ 0.39
COL4A2-204ENST00000463084 CNBD1Q8NA66 436 aa17.46■□□□□ 0.39
COL4A2-204ENST00000463084 RTF1Q92541 710 aaKnown RBP17.46■□□□□ 0.39
COL4A2-204ENST00000463084 KLRG1Q96E93 195 aa17.46■□□□□ 0.39
COL4A2-204ENST00000463084 GLTPD2A6NH11 291 aa17.45■□□□□ 0.38
COL4A2-204ENST00000463084 VEGFAP15692 232 aaPredicted RBP17.45■□□□□ 0.38
COL4A2-204ENST00000463084 IL6STP40189 918 aaPredicted RBP17.45■□□□□ 0.38
COL4A2-204ENST00000463084 DPY19L2Q6NUT2 758 aa17.45■□□□□ 0.38
COL4A2-204ENST00000463084 U2AF1L5P0DN76 240 aaPredicted RBP17.44■□□□□ 0.38
COL4A2-204ENST00000463084 ZEB1P37275 1124 aaPredicted RBP17.44■□□□□ 0.38
COL4A2-204ENST00000463084 PIP4K2AP48426 406 aaPredicted RBP17.44■□□□□ 0.38
COL4A2-204ENST00000463084 U2AF1Q01081 240 aaKnown RBP eCLIP17.44■□□□□ 0.38
COL4A2-204ENST00000463084 PRR5LQ6MZQ0 368 aa17.44■□□□□ 0.38
COL4A2-204ENST00000463084 DZIP3Q86Y13 1208 aaKnown RBP17.44■□□□□ 0.38
COL4A2-204ENST00000463084 BRIP1Q9BX63 1249 aa17.44■□□□□ 0.38
COL4A2-204ENST00000463084 PDZRN3Q9UPQ7 1066 aa17.44■□□□□ 0.38
COL4A2-204ENST00000463084 AFDNP55196 1824 aaKnown RBP17.44■□□□□ 0.38
COL4A2-204ENST00000463084 WDR90Q96KV7 1748 aa17.44■□□□□ 0.38
COL4A2-204ENST00000463084 COL3A1P02461 1466 aaPredicted RBP17.44■□□□□ 0.38
COL4A2-204ENST00000463084 TNRC6CQ9HCJ0 1690 aaKnown RBP17.43■□□□□ 0.38
COL4A2-204ENST00000463084 NFKBIEO00221 500 aa17.43■□□□□ 0.38
COL4A2-204ENST00000463084 ERFEQ4G0M1 354 aa17.43■□□□□ 0.38
COL4A2-204ENST00000463084 VIRMAQ69YN4 1812 aaKnown RBP17.42■□□□□ 0.38
COL4A2-204ENST00000463084 NPC1L1Q9UHC9 1359 aa17.42■□□□□ 0.38
COL4A2-204ENST00000463084 KCNQ3O43525 872 aa17.42■□□□□ 0.38
COL4A2-204ENST00000463084 PHACTR3Q96KR7 559 aa17.42■□□□□ 0.38
COL4A2-204ENST00000463084 UBR2Q8IWV8 1755 aa17.41■□□□□ 0.38
COL4A2-204ENST00000463084 PRELPP51888 382 aa17.41■□□□□ 0.38
COL4A2-204ENST00000463084 MCM10Q7L590 875 aa17.41■□□□□ 0.38
COL4A2-204ENST00000463084 NBPF5PQ86XG9 351 aaPredicted RBP17.41■□□□□ 0.38
COL4A2-204ENST00000463084 CNKSR1Q969H4 720 aa17.41■□□□□ 0.38
COL4A2-204ENST00000463084 ZNF652Q9Y2D9 606 aa17.41■□□□□ 0.38
COL4A2-204ENST00000463084 NRXN2Q9P2S2 1712 aa17.41■□□□□ 0.38
COL4A2-204ENST00000463084 FAM177BA6PVY3 158 aa17.4■□□□□ 0.38
COL4A2-204ENST00000463084 CAMTA2O94983 1202 aa17.4■□□□□ 0.38
COL4A2-204ENST00000463084 RSPH6AQ9H0K4 717 aa17.4■□□□□ 0.38
COL4A2-204ENST00000463084 TAOK3Q9H2K8 898 aa17.4■□□□□ 0.38
COL4A2-204ENST00000463084 NEFMP07197 916 aa17.39■□□□□ 0.37
COL4A2-204ENST00000463084 USP16Q9Y5T5 823 aa17.39■□□□□ 0.37
COL4A2-204ENST00000463084 SCN7AQ01118 1682 aa17.39■□□□□ 0.37
COL4A2-204ENST00000463084 PRPF40BQ6NWY9 871 aaKnown RBP17.38■□□□□ 0.37
COL4A2-204ENST00000463084 CEMIPQ8WUJ3 1361 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms