RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 GOLGA3Q08378 1498 aa8.25□□□□□ -1.09
COPS3-204ENST00000462236 SEC13P55735 322 aa8.24□□□□□ -1.09
COPS3-204ENST00000462236 TTC37Q6PGP7 1564 aa8.23□□□□□ -1.09
COPS3-204ENST00000462236 TMEM88BA6NKF7 163 aa8.23□□□□□ -1.09
COPS3-204ENST00000462236 PSME1Q06323 249 aa8.23□□□□□ -1.09
COPS3-204ENST00000462236 DPYDQ12882 1025 aa8.23□□□□□ -1.09
COPS3-204ENST00000462236 ESCO1Q5FWF5 840 aa8.23□□□□□ -1.09
COPS3-204ENST00000462236 B4GALNT3Q6L9W6 998 aa8.23□□□□□ -1.09
COPS3-204ENST00000462236 PREX1Q8TCU6 1659 aa8.23□□□□□ -1.09
COPS3-204ENST00000462236 PATL2C9JE40 543 aaKnown RBP8.22□□□□□ -1.09
COPS3-204ENST00000462236 BACH1O14867 736 aa8.22□□□□□ -1.09
COPS3-204ENST00000462236 ZIC2O95409 532 aaPredicted RBP8.22□□□□□ -1.09
COPS3-204ENST00000462236 ADH1AP07327 375 aa8.22□□□□□ -1.09
COPS3-204ENST00000462236 TIMP2P16035 220 aa8.22□□□□□ -1.09
COPS3-204ENST00000462236 WDR4P57081 412 aaKnown RBP8.22□□□□□ -1.09
COPS3-204ENST00000462236 LAPTM4AQ15012 233 aa8.22□□□□□ -1.09
COPS3-204ENST00000462236 TMEM164Q5U3C3 297 aa8.22□□□□□ -1.09
COPS3-204ENST00000462236 TPCN2Q8NHX9 752 aa8.22□□□□□ -1.09
COPS3-204ENST00000462236 ZNF594Q96JF6 807 aaPredicted RBP8.22□□□□□ -1.09
COPS3-204ENST00000462236 KIAA1024Q9UPX6 916 aa8.22□□□□□ -1.09
COPS3-204ENST00000462236 ZMYM4Q5VZL5 1548 aa8.22□□□□□ -1.09
COPS3-204ENST00000462236 AVPP01185 164 aa8.21□□□□□ -1.1
COPS3-204ENST00000462236 ADD1P35611 737 aaKnown RBP8.21□□□□□ -1.1
COPS3-204ENST00000462236 KCTD17Q8N5Z5 321 aa8.21□□□□□ -1.1
COPS3-204ENST00000462236 CLP1Q92989 425 aaKnown RBP8.21□□□□□ -1.1
COPS3-204ENST00000462236 ITPKCQ96DU7 683 aa8.21□□□□□ -1.1
COPS3-204ENST00000462236 FHOD3Q2V2M9 1422 aa8.2□□□□□ -1.1
COPS3-204ENST00000462236 SAMD9Q5K651 1589 aa8.2□□□□□ -1.1
COPS3-204ENST00000462236 DGAT1O75907 488 aa8.2□□□□□ -1.1
COPS3-204ENST00000462236 RAPGEF3O95398 923 aa8.2□□□□□ -1.1
COPS3-204ENST00000462236 INHAP05111 366 aa8.2□□□□□ -1.1
COPS3-204ENST00000462236 SCNN1DP51172 638 aa8.2□□□□□ -1.1
COPS3-204ENST00000462236 STK32AQ8WU08 396 aa8.2□□□□□ -1.1
COPS3-204ENST00000462236 HPS1Q92902 700 aa8.2□□□□□ -1.1
COPS3-204ENST00000462236 SLC4A9Q96Q91 983 aa8.2□□□□□ -1.1
COPS3-204ENST00000462236 RAPGEF6Q8TEU7 1601 aa8.2□□□□□ -1.1
COPS3-204ENST00000462236 SPATA31D1Q6ZQQ2 1576 aa8.19□□□□□ -1.1
COPS3-204ENST00000462236 CFAP74Q9C0B2 1584 aa8.19□□□□□ -1.1
COPS3-204ENST00000462236 NRG2O14511 850 aaPredicted RBP8.19□□□□□ -1.1
COPS3-204ENST00000462236 BRD1O95696 1058 aa8.19□□□□□ -1.1
COPS3-204ENST00000462236 GDF10P55107 478 aa8.19□□□□□ -1.1
COPS3-204ENST00000462236 XAGE2Q96GT9 111 aa8.19□□□□□ -1.1
COPS3-204ENST00000462236 TMEM229AB2RXF0 380 aa8.18□□□□□ -1.1
COPS3-204ENST00000462236 PTGIRP43119 386 aa8.18□□□□□ -1.1
COPS3-204ENST00000462236 SMCPP49901 116 aaPredicted RBP8.18□□□□□ -1.1
COPS3-204ENST00000462236 HSPA2P54652 639 aa8.18□□□□□ -1.1
COPS3-204ENST00000462236 CTC1Q2NKJ3 1217 aa8.18□□□□□ -1.1
COPS3-204ENST00000462236 MEIOBQ8N635 442 aa8.18□□□□□ -1.1
COPS3-204ENST00000462236 TSEN34Q9BSV6 310 aaKnown RBP8.18□□□□□ -1.1
COPS3-204ENST00000462236 ZNF358Q9NW07 568 aa8.18□□□□□ -1.1
COPS3-204ENST00000462236 PRXQ9BXM0 1461 aa8.18□□□□□ -1.1
COPS3-204ENST00000462236 CLN3Q13286 438 aa8.17□□□□□ -1.1
COPS3-204ENST00000462236 ESYT1Q9BSJ8 1104 aa8.17□□□□□ -1.1
COPS3-204ENST00000462236 ZFAND3Q9H8U3 227 aa8.17□□□□□ -1.1
COPS3-204ENST00000462236 ETNK1Q9HBU6 452 aa8.17□□□□□ -1.1
COPS3-204ENST00000462236 FANCAO15360 1455 aa8.17□□□□□ -1.1
COPS3-204ENST00000462236 ARHGEF12Q9NZN5 1544 aa8.17□□□□□ -1.1
COPS3-204ENST00000462236 EFCAB5A4FU69 1503 aa8.16□□□□□ -1.1
COPS3-204ENST00000462236 SFI1A8K8P3 1242 aa8.16□□□□□ -1.1
COPS3-204ENST00000462236 CAPN5O15484 640 aaPredicted RBP8.16□□□□□ -1.1
COPS3-204ENST00000462236 DENND4BO75064 1496 aaPredicted RBP8.16□□□□□ -1.1
COPS3-204ENST00000462236 CBLBQ13191 982 aa8.16□□□□□ -1.1
COPS3-204ENST00000462236 CRIPAKQ8N1N5 446 aa8.16□□□□□ -1.1
COPS3-204ENST00000462236 KDF1Q8NAX2 398 aaPredicted RBP8.16□□□□□ -1.1
COPS3-204ENST00000462236 GAS2L2Q8NHY3 880 aa8.16□□□□□ -1.1
COPS3-204ENST00000462236 C1orf216Q8TAB5 229 aa8.16□□□□□ -1.1
COPS3-204ENST00000462236 DISP3Q9P2K9 1392 aa8.16□□□□□ -1.1
COPS3-204ENST00000462236 HRH3Q9Y5N1 445 aa8.16□□□□□ -1.1
COPS3-204ENST00000462236 HECW1Q76N89 1606 aa8.15□□□□□ -1.1
COPS3-204ENST00000462236 MAGI2Q86UL8 1455 aa8.15□□□□□ -1.1
COPS3-204ENST00000462236 A0A1W2PRU2 124 aa8.15□□□□□ -1.1
COPS3-204ENST00000462236 FAM187AA6NFU0 413 aa8.15□□□□□ -1.1
COPS3-204ENST00000462236 UPP2O95045 317 aa8.15□□□□□ -1.1
COPS3-204ENST00000462236 GPC1P35052 558 aa8.15□□□□□ -1.1
COPS3-204ENST00000462236 KCNA1Q09470 495 aa8.15□□□□□ -1.1
COPS3-204ENST00000462236 MTFR1Q15390 333 aa8.15□□□□□ -1.1
COPS3-204ENST00000462236 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.15□□□□□ -1.1
COPS3-204ENST00000462236 LTBP4Q8N2S1 1624 aa8.14□□□□□ -1.11
COPS3-204ENST00000462236 ZFYVE16Q7Z3T8 1539 aa8.14□□□□□ -1.11
COPS3-204ENST00000462236 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.14□□□□□ -1.116e-8■■■■□ 20.3
COPS3-204ENST00000462236 NUP153P49790 1475 aaKnown RBP8.14□□□□□ -1.11
COPS3-204ENST00000462236 AKNAQ7Z591 1439 aa8.14□□□□□ -1.11
COPS3-204ENST00000462236 YEATS2Q9ULM3 1422 aa8.14□□□□□ -1.11
COPS3-204ENST00000462236 GFRA3O60609 400 aa8.14□□□□□ -1.11
COPS3-204ENST00000462236 SMTNP53814 917 aa8.14□□□□□ -1.11
COPS3-204ENST00000462236 PKDCCQ504Y2 493 aa8.14□□□□□ -1.11
COPS3-204ENST00000462236 CNKSR1Q969H4 720 aa8.14□□□□□ -1.11
COPS3-204ENST00000462236 NLRP3Q96P20 1036 aa8.14□□□□□ -1.11
COPS3-204ENST00000462236 ARHGEF10LQ9HCE6 1279 aa8.14□□□□□ -1.11
COPS3-204ENST00000462236 POGZQ7Z3K3 1410 aa8.13□□□□□ -1.11
COPS3-204ENST00000462236 CDK2AP1O14519 115 aa8.13□□□□□ -1.11
COPS3-204ENST00000462236 IL2RAP01589 272 aa8.13□□□□□ -1.11
COPS3-204ENST00000462236 SSFA2P28290 1259 aa8.13□□□□□ -1.11
COPS3-204ENST00000462236 EPHA4P54764 986 aa8.13□□□□□ -1.11
COPS3-204ENST00000462236 HINFPQ9BQA5 517 aa8.13□□□□□ -1.11
COPS3-204ENST00000462236 IQSEC2Q5JU85 1478 aa8.13□□□□□ -1.11
COPS3-204ENST00000462236 C3P01024 1663 aa8.12□□□□□ -1.11
COPS3-204ENST00000462236 ARID4BQ4LE39 1312 aaPredicted RBP8.12□□□□□ -1.11
COPS3-204ENST00000462236 A6NJY4 79 aa8.12□□□□□ -1.11
COPS3-204ENST00000462236 SPINT1O43278 529 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms