RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 CPSF1Q10570 1443 aaKnown RBP8.45□□□□□ -1.06
SMARCC1-204ENST00000462198 SLIT3O75094 1523 aa8.44□□□□□ -1.06
SMARCC1-204ENST00000462198 ABCC6O95255 1503 aa8.44□□□□□ -1.06
SMARCC1-204ENST00000462198 SRPK2P78362 688 aaKnown RBP8.44□□□□□ -1.06
SMARCC1-204ENST00000462198 ANKRD13DQ6ZTN6 518 aa8.44□□□□□ -1.06
SMARCC1-204ENST00000462198 CCER1Q8TC90 406 aaPredicted RBP8.44□□□□□ -1.06
SMARCC1-204ENST00000462198 PLA2G2EQ9NZK7 142 aa8.44□□□□□ -1.06
SMARCC1-204ENST00000462198 CABP1Q9NZU7 370 aa8.44□□□□□ -1.06
SMARCC1-204ENST00000462198 BCS1LQ9Y276 419 aa8.44□□□□□ -1.06
SMARCC1-204ENST00000462198 LY75O60449 1722 aa8.43□□□□□ -1.06
SMARCC1-204ENST00000462198 LSM11P83369 360 aaKnown RBP eCLIP8.43□□□□□ -1.065e-12■■■□□ 15.9
SMARCC1-204ENST00000462198 NEUROD1Q13562 356 aa8.43□□□□□ -1.06
SMARCC1-204ENST00000462198 C9orf131Q5VYM1 1079 aa8.43□□□□□ -1.06
SMARCC1-204ENST00000462198 KDM2BQ8NHM5 1336 aa8.43□□□□□ -1.06
SMARCC1-204ENST00000462198 MLLT1Q03111 559 aaPredicted RBP8.42□□□□□ -1.06
SMARCC1-204ENST00000462198 NEUROD2Q15784 382 aa8.42□□□□□ -1.06
SMARCC1-204ENST00000462198 TMEM92Q6UXU6 159 aa8.42□□□□□ -1.06
SMARCC1-204ENST00000462198 SMIM5Q71RC9 77 aa8.42□□□□□ -1.06
SMARCC1-204ENST00000462198 DCAF11Q8TEB1 546 aa8.42□□□□□ -1.06
SMARCC1-204ENST00000462198 SIN3AQ96ST3 1273 aa8.42□□□□□ -1.06
SMARCC1-204ENST00000462198 PRDM10Q9NQV6 1147 aa8.42□□□□□ -1.06
SMARCC1-204ENST00000462198 CICQ96RK0 1608 aaPredicted RBP8.41□□□□□ -1.06
SMARCC1-204ENST00000462198 A0A0G2JLW4 131 aa8.41□□□□□ -1.06
SMARCC1-204ENST00000462198 TESPA1A2RU30 521 aaPredicted RBP8.41□□□□□ -1.06
SMARCC1-204ENST00000462198 FOXN1O15353 648 aa8.41□□□□□ -1.06
SMARCC1-204ENST00000462198 PIK3C2AO00443 1686 aa8.4□□□□□ -1.06
SMARCC1-204ENST00000462198 ANKRD36BQ8N2N9 1353 aa8.4□□□□□ -1.06
SMARCC1-204ENST00000462198 FCHSD2O94868 740 aa8.4□□□□□ -1.06
SMARCC1-204ENST00000462198 HMGB2P26583 209 aaKnown RBP8.4□□□□□ -1.06
SMARCC1-204ENST00000462198 TGFB2P61812 414 aa8.4□□□□□ -1.06
SMARCC1-204ENST00000462198 ABHD8Q96I13 439 aa8.4□□□□□ -1.06
SMARCC1-204ENST00000462198 KCPQ6ZWJ8 1503 aa8.39□□□□□ -1.07
SMARCC1-204ENST00000462198 USP47Q96K76 1375 aa8.39□□□□□ -1.07
SMARCC1-204ENST00000462198 RGS19P49795 217 aa8.39□□□□□ -1.07
SMARCC1-204ENST00000462198 ANKRD24Q8TF21 1146 aa8.39□□□□□ -1.07
SMARCC1-204ENST00000462198 SLC24A3Q9HC58 644 aa8.39□□□□□ -1.07
SMARCC1-204ENST00000462198 N4BP2Q86UW6 1770 aaPredicted RBP8.39□□□□□ -1.07
SMARCC1-204ENST00000462198 NSD2O96028 1365 aa8.38□□□□□ -1.07
SMARCC1-204ENST00000462198 TTC21BQ7Z4L5 1316 aa8.38□□□□□ -1.07
SMARCC1-204ENST00000462198 CLSPNQ9HAW4 1339 aa8.38□□□□□ -1.07
SMARCC1-204ENST00000462198 PHF14O94880 888 aa8.38□□□□□ -1.07
SMARCC1-204ENST00000462198 CTCFP49711 727 aaPredicted RBP8.38□□□□□ -1.07
SMARCC1-204ENST00000462198 AMIGO3Q86WK7 504 aa8.38□□□□□ -1.07
SMARCC1-204ENST00000462198 MICALL2Q8IY33 904 aa8.38□□□□□ -1.07
SMARCC1-204ENST00000462198 MFRPQ9BY79 579 aa8.38□□□□□ -1.07
SMARCC1-204ENST00000462198 RNF181Q9P0P0 153 aa8.38□□□□□ -1.07
SMARCC1-204ENST00000462198 MKRN1Q9UHC7 482 aaKnown RBP8.38□□□□□ -1.07
SMARCC1-204ENST00000462198 C10orf71Q711Q0 1435 aa8.37□□□□□ -1.07
SMARCC1-204ENST00000462198 TONSLQ96HA7 1378 aa8.37□□□□□ -1.07
SMARCC1-204ENST00000462198 PLEKHG2Q9H7P9 1386 aa8.37□□□□□ -1.07
SMARCC1-204ENST00000462198 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.37□□□□□ -1.07
SMARCC1-204ENST00000462198 CCDC85CA6NKD9 419 aa8.37□□□□□ -1.07
SMARCC1-204ENST00000462198 VEGFAP15692 232 aaPredicted RBP8.37□□□□□ -1.07
SMARCC1-204ENST00000462198 DPEP1P16444 411 aa8.37□□□□□ -1.07
SMARCC1-204ENST00000462198 LBX1P52954 281 aa8.37□□□□□ -1.07
SMARCC1-204ENST00000462198 AK7Q96M32 723 aa8.37□□□□□ -1.07
SMARCC1-204ENST00000462198 STAC3Q96MF2 364 aa8.37□□□□□ -1.07
SMARCC1-204ENST00000462198 HCSTQ9UBK5 93 aa8.37□□□□□ -1.07
SMARCC1-204ENST00000462198 C5P01031 1676 aa8.37□□□□□ -1.07
SMARCC1-204ENST00000462198 TAF1LQ8IZX4 1826 aa8.36□□□□□ -1.07
SMARCC1-204ENST00000462198 ZNF316A6NFI3 1004 aaPredicted RBP8.36□□□□□ -1.07
SMARCC1-204ENST00000462198 ZMYND10O75800 440 aa8.36□□□□□ -1.07
SMARCC1-204ENST00000462198 ZCRB1Q8TBF4 217 aaKnown RBP8.36□□□□□ -1.07
SMARCC1-204ENST00000462198 L3MBTL2Q969R5 705 aa8.36□□□□□ -1.07
SMARCC1-204ENST00000462198 AIDAQ96BJ3 306 aa8.36□□□□□ -1.07
SMARCC1-204ENST00000462198 KIAA1210Q9ULL0 1709 aa8.36□□□□□ -1.07
SMARCC1-204ENST00000462198 PXDNLA1KZ92 1463 aa8.36□□□□□ -1.07
SMARCC1-204ENST00000462198 USP54Q70EL1 1684 aa8.36□□□□□ -1.07
SMARCC1-204ENST00000462198 SBF1O95248 1867 aa8.36□□□□□ -1.07
SMARCC1-204ENST00000462198 DOT1LQ8TEK3 1739 aa8.35□□□□□ -1.07
SMARCC1-204ENST00000462198 SEMA3EO15041 775 aa8.35□□□□□ -1.07
SMARCC1-204ENST00000462198 MMP10P09238 476 aa8.35□□□□□ -1.07
SMARCC1-204ENST00000462198 PBX2P40425 430 aa8.35□□□□□ -1.07
SMARCC1-204ENST00000462198 E2F4Q16254 413 aa8.35□□□□□ -1.07
SMARCC1-204ENST00000462198 NFAT5O94916 1531 aa8.34□□□□□ -1.07
SMARCC1-204ENST00000462198 TTC21AQ8NDW8 1320 aa8.34□□□□□ -1.07
SMARCC1-204ENST00000462198 TNRC6CQ9HCJ0 1690 aaKnown RBP8.34□□□□□ -1.07
SMARCC1-204ENST00000462198 KIF13BQ9NQT8 1826 aa8.34□□□□□ -1.07
SMARCC1-204ENST00000462198 KCNA3P22001 575 aa8.34□□□□□ -1.07
SMARCC1-204ENST00000462198 ARSIQ5FYB1 569 aa8.34□□□□□ -1.07
SMARCC1-204ENST00000462198 LTV1Q96GA3 475 aaPredicted RBP8.34□□□□□ -1.07
SMARCC1-204ENST00000462198 PKD1L3Q7Z443 1732 aa8.34□□□□□ -1.07
SMARCC1-204ENST00000462198 KIAA1551Q9HCM1 1747 aa8.34□□□□□ -1.07
SMARCC1-204ENST00000462198 GLTPD2A6NH11 291 aa8.33□□□□□ -1.08
SMARCC1-204ENST00000462198 SSFA2P28290 1259 aa8.33□□□□□ -1.08
SMARCC1-204ENST00000462198 PDE4DIPQ5VU43 2346 aa8.33□□□□□ -1.08
SMARCC1-204ENST00000462198 MPRIPQ6WCQ1 1025 aa8.33□□□□□ -1.08
SMARCC1-204ENST00000462198 UBR3Q6ZT12 1888 aa8.33□□□□□ -1.08
SMARCC1-204ENST00000462198 PIM2Q9P1W9 311 aa8.33□□□□□ -1.08
SMARCC1-204ENST00000462198 ARFGEF1Q9Y6D6 1849 aa8.33□□□□□ -1.08
SMARCC1-204ENST00000462198 C4BP0C0L5 1744 aa8.32□□□□□ -1.08
SMARCC1-204ENST00000462198 NBPF1Q3BBV0 1214 aa8.32□□□□□ -1.08
SMARCC1-204ENST00000462198 DALRD3Q5D0E6 543 aaKnown RBP8.32□□□□□ -1.08
SMARCC1-204ENST00000462198 NLGN1Q8N2Q7 840 aa8.32□□□□□ -1.08
SMARCC1-204ENST00000462198 DCAF5Q96JK2 942 aa8.32□□□□□ -1.08
SMARCC1-204ENST00000462198 WBP1LQ9NX94 342 aa8.32□□□□□ -1.08
SMARCC1-204ENST00000462198 PALLDQ8WX93 1383 aa8.32□□□□□ -1.08
SMARCC1-204ENST00000462198 TNRC18O15417 2968 aaPredicted RBP8.31□□□□□ -1.08
SMARCC1-204ENST00000462198 CENPJQ9HC77 1338 aaPredicted RBP8.31□□□□□ -1.08
SMARCC1-204ENST00000462198 QRICH2Q9H0J4 1663 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms