RNA–Protein interactions for RNA: ENST00000461349.5

C9orf78-202, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 3

Gene C9orf78, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-202ENST00000461349 ZNF530Q6P9A1 599 aaPredicted RBP17.62■□□□□ 0.41
C9orf78-202ENST00000461349 AIDAQ96BJ3 306 aa17.62■□□□□ 0.41
C9orf78-202ENST00000461349 CARD14Q9BXL6 1004 aa17.62■□□□□ 0.41
C9orf78-202ENST00000461349 PRDM10Q9NQV6 1147 aa17.62■□□□□ 0.41
C9orf78-202ENST00000461349 FER1L6Q2WGJ9 1857 aa17.61■□□□□ 0.41
C9orf78-202ENST00000461349 FOXN1O15353 648 aa17.61■□□□□ 0.41
C9orf78-202ENST00000461349 MTHFSP49914 203 aa17.61■□□□□ 0.41
C9orf78-202ENST00000461349 CHADLQ6NUI6 762 aa17.61■□□□□ 0.41
C9orf78-202ENST00000461349 POLKQ9UBT6 870 aa17.61■□□□□ 0.41
C9orf78-202ENST00000461349 AMOTQ4VCS5 1084 aa17.6■□□□□ 0.41
C9orf78-202ENST00000461349 C1orf141Q5JVX7 400 aa17.6■□□□□ 0.41
C9orf78-202ENST00000461349 VIRMAQ69YN4 1812 aaKnown RBP17.6■□□□□ 0.41
C9orf78-202ENST00000461349 CACNA1SQ13698 1873 aa17.59■□□□□ 0.41
C9orf78-202ENST00000461349 POTECB2RU33 542 aa17.59■□□□□ 0.41
C9orf78-202ENST00000461349 H0YIN7 160 aa17.59■□□□□ 0.41
C9orf78-202ENST00000461349 CTCFP49711 727 aaPredicted RBP17.59■□□□□ 0.41
C9orf78-202ENST00000461349 C2CD5Q86YS7 1000 aa17.59■□□□□ 0.41
C9orf78-202ENST00000461349 NFATC2IPQ8NCF5 419 aa17.59■□□□□ 0.41
C9orf78-202ENST00000461349 NFKBIEO00221 500 aa17.58■□□□□ 0.4
C9orf78-202ENST00000461349 INTS5Q6P9B9 1019 aaKnown RBP17.58■□□□□ 0.4
C9orf78-202ENST00000461349 CNTNAP1P78357 1384 aa17.57■□□□□ 0.4
C9orf78-202ENST00000461349 SCN4AP35499 1836 aa17.57■□□□□ 0.4
C9orf78-202ENST00000461349 SERPINB2P05120 415 aa17.57■□□□□ 0.4
C9orf78-202ENST00000461349 NFIXQ14938 502 aa17.57■□□□□ 0.4
C9orf78-202ENST00000461349 ERFEQ4G0M1 354 aa17.57■□□□□ 0.4
C9orf78-202ENST00000461349 NARFQ9UHQ1 456 aa17.56■□□□□ 0.4
C9orf78-202ENST00000461349 ANKRD31Q8N7Z5 1873 aa17.56■□□□□ 0.4
C9orf78-202ENST00000461349 COL15A1P39059 1388 aa17.55■□□□□ 0.4
C9orf78-202ENST00000461349 SOS1Q07889 1333 aaPredicted RBP17.55■□□□□ 0.4
C9orf78-202ENST00000461349 TNNT2P45379 298 aaPredicted RBP17.55■□□□□ 0.4
C9orf78-202ENST00000461349 DNAJC10Q8IXB1 793 aa17.54■□□□□ 0.4
C9orf78-202ENST00000461349 COL11A2P13942 1736 aaPredicted RBP17.53■□□□□ 0.4
C9orf78-202ENST00000461349 IQCA1LA6NCM1 817 aa17.52■□□□□ 0.4
C9orf78-202ENST00000461349 POTEIP0CG38 1075 aa17.52■□□□□ 0.4
C9orf78-202ENST00000461349 POTEJP0CG39 1038 aa17.52■□□□□ 0.4
C9orf78-202ENST00000461349 FAM161AQ3B820 660 aa17.52■□□□□ 0.4
C9orf78-202ENST00000461349 ZNF622Q969S3 477 aaKnown RBP eCLIP17.52■□□□□ 0.41e-9■□□□□ 10.8
C9orf78-202ENST00000461349 ZNF219Q9P2Y4 722 aaPredicted RBP17.52■□□□□ 0.4
C9orf78-202ENST00000461349 PDZRN3Q9UPQ7 1066 aa17.52■□□□□ 0.4
C9orf78-202ENST00000461349 CARMIL3Q8ND23 1372 aa17.52■□□□□ 0.39
C9orf78-202ENST00000461349 ARFGEF2Q9Y6D5 1785 aa17.51■□□□□ 0.39
C9orf78-202ENST00000461349 C21orf2O43822 256 aa17.51■□□□□ 0.39
C9orf78-202ENST00000461349 LBX1P52954 281 aa17.51■□□□□ 0.39
C9orf78-202ENST00000461349 TAOK3Q9H2K8 898 aa17.51■□□□□ 0.39
C9orf78-202ENST00000461349 TMEM88BA6NKF7 163 aa17.5■□□□□ 0.39
C9orf78-202ENST00000461349 DDNO94850 711 aaPredicted RBP17.5■□□□□ 0.39
C9orf78-202ENST00000461349 CYP19A1P11511 503 aaPredicted RBP17.5■□□□□ 0.39
C9orf78-202ENST00000461349 PDE6BP35913 854 aa17.5■□□□□ 0.39
C9orf78-202ENST00000461349 VEGFBP49765 207 aa17.5■□□□□ 0.39
C9orf78-202ENST00000461349 LDHDQ86WU2 507 aa17.5■□□□□ 0.39
C9orf78-202ENST00000461349 ABHD8Q96I13 439 aa17.5■□□□□ 0.39
C9orf78-202ENST00000461349 PASKQ96RG2 1323 aa17.49■□□□□ 0.39
C9orf78-202ENST00000461349 LTBP3Q9NS15 1303 aa17.49■□□□□ 0.39
C9orf78-202ENST00000461349 BICDL1Q6ZP65 573 aa17.49■□□□□ 0.39
C9orf78-202ENST00000461349 BCL2L12Q9HB09 334 aa17.49■□□□□ 0.39
C9orf78-202ENST00000461349 WBP1LQ9NX94 342 aa17.49■□□□□ 0.39
C9orf78-202ENST00000461349 PCDH10Q9P2E7 1040 aa17.49■□□□□ 0.39
C9orf78-202ENST00000461349 ZBTB1Q9Y2K1 713 aa17.48■□□□□ 0.39
C9orf78-202ENST00000461349 SLX4Q8IY92 1834 aa17.48■□□□□ 0.39
C9orf78-202ENST00000461349 SCN7AQ01118 1682 aa17.48■□□□□ 0.39
C9orf78-202ENST00000461349 AEBP1Q8IUX7 1158 aa17.47■□□□□ 0.39
C9orf78-202ENST00000461349 BRIP1Q9BX63 1249 aa17.47■□□□□ 0.39
C9orf78-202ENST00000461349 SLC52A2Q9HAB3 445 aa17.47■□□□□ 0.39
C9orf78-202ENST00000461349 UBR2Q8IWV8 1755 aa17.46■□□□□ 0.39
C9orf78-202ENST00000461349 SOGA3Q5TF21 947 aa17.46■□□□□ 0.39
C9orf78-202ENST00000461349 A0A087WZG4 1122 aa17.45■□□□□ 0.38
C9orf78-202ENST00000461349 MAP2K1Q02750 393 aaPredicted RBP17.45■□□□□ 0.38
C9orf78-202ENST00000461349 MLLT1Q03111 559 aaPredicted RBP17.45■□□□□ 0.38
C9orf78-202ENST00000461349 AKAP4Q5JQC9 854 aa17.45■□□□□ 0.38
C9orf78-202ENST00000461349 SULT6B1Q6IMI4 303 aa17.45■□□□□ 0.38
C9orf78-202ENST00000461349 TAF1DQ9H5J8 278 aaPredicted RBP17.45■□□□□ 0.38
C9orf78-202ENST00000461349 MRC1P22897 1456 aa17.44■□□□□ 0.38
C9orf78-202ENST00000461349 NPHP1O15259 732 aa17.44■□□□□ 0.38
C9orf78-202ENST00000461349 HSPA8P11142 646 aaKnown RBP17.44■□□□□ 0.38
C9orf78-202ENST00000461349 CANXP27824 592 aaKnown RBP17.44■□□□□ 0.38
C9orf78-202ENST00000461349 EAPPQ56P03 285 aaPredicted RBP17.44■□□□□ 0.38
C9orf78-202ENST00000461349 CNKSR1Q969H4 720 aa17.44■□□□□ 0.38
C9orf78-202ENST00000461349 L3MBTL3Q96JM7 780 aaPredicted RBP17.44■□□□□ 0.38
C9orf78-202ENST00000461349 CLEC11AQ9Y240 323 aa17.44■□□□□ 0.38
C9orf78-202ENST00000461349 SLC39A6Q13433 755 aa17.43■□□□□ 0.38
C9orf78-202ENST00000461349 DEFB115Q30KQ5 88 aa17.43■□□□□ 0.38
C9orf78-202ENST00000461349 VSIG10Q8N0Z9 540 aa17.43■□□□□ 0.38
C9orf78-202ENST00000461349 ADAMTSL1Q8N6G6 1762 aa17.43■□□□□ 0.38
C9orf78-202ENST00000461349 CCDC85CA6NKD9 419 aa17.42■□□□□ 0.38
C9orf78-202ENST00000461349 ITGBL1O95965 494 aaPredicted RBP17.42■□□□□ 0.38
C9orf78-202ENST00000461349 PRR5LQ6MZQ0 368 aa17.42■□□□□ 0.38
C9orf78-202ENST00000461349 POLR3GLQ9BT43 218 aa17.42■□□□□ 0.38
C9orf78-202ENST00000461349 RASSF10A6NK89 507 aa17.41■□□□□ 0.38
C9orf78-202ENST00000461349 STARD3NLO95772 234 aa17.41■□□□□ 0.38
C9orf78-202ENST00000461349 TBC1D9BQ66K14 1250 aa17.41■□□□□ 0.38
C9orf78-202ENST00000461349 PRPF40BQ6NWY9 871 aaKnown RBP17.41■□□□□ 0.38
C9orf78-202ENST00000461349 HACL1Q9UJ83 578 aa17.41■□□□□ 0.38
C9orf78-202ENST00000461349 STYK1Q6J9G0 422 aa17.4■□□□□ 0.38
C9orf78-202ENST00000461349 CCDC24Q8N4L8 307 aa17.4■□□□□ 0.38
C9orf78-202ENST00000461349 BEGAINQ9BUH8 593 aa17.4■□□□□ 0.38
C9orf78-202ENST00000461349 LGR6Q9HBX8 967 aa17.4■□□□□ 0.38
C9orf78-202ENST00000461349 ABT1Q9ULW3 272 aaKnown RBP17.4■□□□□ 0.38
C9orf78-202ENST00000461349 WDR33Q9C0J8 1336 aaKnown RBP17.4■□□□□ 0.38
C9orf78-202ENST00000461349 RNMTO43148 476 aaKnown RBP17.39■□□□□ 0.37
C9orf78-202ENST00000461349 EIF5P55010 431 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms