RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 KLHDC4Q8TBB5 520 aa11.53□□□□□ -0.56
NUDCD3-203ENST00000460110 TBC1D9Q6ZT07 1266 aa11.52□□□□□ -0.56
NUDCD3-203ENST00000460110 HSCBQ8IWL3 235 aa11.52□□□□□ -0.56
NUDCD3-203ENST00000460110 ANKRD13DQ6ZTN6 518 aa11.52□□□□□ -0.57
NUDCD3-203ENST00000460110 UBE3BQ7Z3V4 1068 aa11.52□□□□□ -0.57
NUDCD3-203ENST00000460110 PLEKHM2Q8IWE5 1019 aa11.52□□□□□ -0.57
NUDCD3-203ENST00000460110 HYPKQ9NX55 129 aa11.52□□□□□ -0.57
NUDCD3-203ENST00000460110 TNS3Q68CZ2 1445 aa11.52□□□□□ -0.57
NUDCD3-203ENST00000460110 CDC45O75419 566 aa11.51□□□□□ -0.57
NUDCD3-203ENST00000460110 KSR2Q6VAB6 950 aa11.51□□□□□ -0.57
NUDCD3-203ENST00000460110 CHD2O14647 1828 aaKnown RBP11.51□□□□□ -0.57
NUDCD3-203ENST00000460110 EXOC5O00471 708 aa11.5□□□□□ -0.57
NUDCD3-203ENST00000460110 G3BP1Q13283 466 aaKnown RBP eCLIP11.5□□□□□ -0.57
NUDCD3-203ENST00000460110 ANO2Q9NQ90 1003 aa11.5□□□□□ -0.57
NUDCD3-203ENST00000460110 DDX21Q9NR30 783 aaKnown RBP eCLIP11.5□□□□□ -0.57
NUDCD3-203ENST00000460110 PXDNQ92626 1479 aa11.5□□□□□ -0.57
NUDCD3-203ENST00000460110 ATP8B2P98198 1209 aa11.5□□□□□ -0.57
NUDCD3-203ENST00000460110 NGLY1Q96IV0 654 aa11.5□□□□□ -0.57
NUDCD3-203ENST00000460110 RTN4Q9NQC3 1192 aaKnown RBP11.5□□□□□ -0.57
NUDCD3-203ENST00000460110 FMN2Q9NZ56 1722 aa11.5□□□□□ -0.57
NUDCD3-203ENST00000460110 WDR17Q8IZU2 1322 aa11.5□□□□□ -0.57
NUDCD3-203ENST00000460110 A0A087WZG4 1122 aa11.5□□□□□ -0.57
NUDCD3-203ENST00000460110 IFIT2P09913 472 aaKnown RBP11.5□□□□□ -0.57
NUDCD3-203ENST00000460110 SDSP20132 328 aa11.5□□□□□ -0.57
NUDCD3-203ENST00000460110 TPRNQ4KMQ1 711 aa11.5□□□□□ -0.57
NUDCD3-203ENST00000460110 C8orf37Q96NL8 207 aa11.5□□□□□ -0.57
NUDCD3-203ENST00000460110 GPTP24298 496 aa11.49□□□□□ -0.57
NUDCD3-203ENST00000460110 BMP2KLQ5H9B9 411 aa11.49□□□□□ -0.57
NUDCD3-203ENST00000460110 AEBP2Q6ZN18 517 aaPredicted RBP11.49□□□□□ -0.57
NUDCD3-203ENST00000460110 CCDC8Q9H0W5 538 aaPredicted RBP11.49□□□□□ -0.57
NUDCD3-203ENST00000460110 ASAP1Q9ULH1 1129 aa11.49□□□□□ -0.57
NUDCD3-203ENST00000460110 GSPT1P15170 499 aaKnown RBP11.48□□□□□ -0.57
NUDCD3-203ENST00000460110 MX1P20591 662 aa11.48□□□□□ -0.57
NUDCD3-203ENST00000460110 BEND3Q5T5X7 828 aa11.48□□□□□ -0.57
NUDCD3-203ENST00000460110 BABAM1Q9NWV8 329 aa11.48□□□□□ -0.57
NUDCD3-203ENST00000460110 KCNJ4P48050 445 aa11.48□□□□□ -0.57
NUDCD3-203ENST00000460110 CLASRPQ8N2M8 674 aaKnown RBP11.48□□□□□ -0.57
NUDCD3-203ENST00000460110 TBC1D32Q96NH3 1257 aa11.48□□□□□ -0.57
NUDCD3-203ENST00000460110 GRM8O00222 908 aa11.48□□□□□ -0.57
NUDCD3-203ENST00000460110 PDE1AP54750 535 aa11.48□□□□□ -0.57
NUDCD3-203ENST00000460110 TTC22Q5TAA0 569 aa11.48□□□□□ -0.57
NUDCD3-203ENST00000460110 TTLL7Q6ZT98 887 aa11.48□□□□□ -0.57
NUDCD3-203ENST00000460110 NEUROD6Q96NK8 337 aa11.48□□□□□ -0.57
NUDCD3-203ENST00000460110 PCDH11XQ9BZA7 1347 aa11.47□□□□□ -0.57
NUDCD3-203ENST00000460110 PCDH11YQ9BZA8 1340 aa11.47□□□□□ -0.57
NUDCD3-203ENST00000460110 AACSQ86V21 672 aa11.47□□□□□ -0.57
NUDCD3-203ENST00000460110 TAF7LQ5H9L4 462 aa11.47□□□□□ -0.57
NUDCD3-203ENST00000460110 FAM182BQ5T319 152 aa11.47□□□□□ -0.57
NUDCD3-203ENST00000460110 BICC1Q9H694 974 aaKnown RBP11.47□□□□□ -0.57
NUDCD3-203ENST00000460110 CEMIPQ8WUJ3 1361 aa11.47□□□□□ -0.57
NUDCD3-203ENST00000460110 SOS2Q07890 1332 aaPredicted RBP11.47□□□□□ -0.57
NUDCD3-203ENST00000460110 DNAJC10Q8IXB1 793 aa11.47□□□□□ -0.57
NUDCD3-203ENST00000460110 RHPN1Q8TCX5 695 aa11.47□□□□□ -0.57
NUDCD3-203ENST00000460110 TBC1D2Q9BYX2 928 aa11.47□□□□□ -0.57
NUDCD3-203ENST00000460110 TOPAZ1Q8N9V7 1692 aa11.46□□□□□ -0.57
NUDCD3-203ENST00000460110 DLG5Q8TDM6 1919 aa11.46□□□□□ -0.57
NUDCD3-203ENST00000460110 NRKQ7Z2Y5 1582 aa11.46□□□□□ -0.57
NUDCD3-203ENST00000460110 PRIM1P49642 420 aaKnown RBP11.46□□□□□ -0.57
NUDCD3-203ENST00000460110 FOXD4L5Q5VV16 416 aaPredicted RBP11.46□□□□□ -0.57
NUDCD3-203ENST00000460110 LINS1Q8NG48 757 aa11.46□□□□□ -0.57
NUDCD3-203ENST00000460110 FOXD4L4Q8WXT5 416 aaPredicted RBP11.46□□□□□ -0.57
NUDCD3-203ENST00000460110 TOM1O60784 492 aa11.46□□□□□ -0.58
NUDCD3-203ENST00000460110 SUCLG2Q96I99 432 aa11.46□□□□□ -0.58
NUDCD3-203ENST00000460110 CARD10Q9BWT7 1032 aa11.46□□□□□ -0.58
NUDCD3-203ENST00000460110 MEGF6O75095 1541 aa11.46□□□□□ -0.58
NUDCD3-203ENST00000460110 KCNQ4P56696 695 aa11.46□□□□□ -0.58
NUDCD3-203ENST00000460110 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.46□□□□□ -0.58
NUDCD3-203ENST00000460110 SOS1Q07889 1333 aaPredicted RBP11.45□□□□□ -0.58
NUDCD3-203ENST00000460110 HOXB7P09629 217 aa11.45□□□□□ -0.58
NUDCD3-203ENST00000460110 MEX3CQ5U5Q3 659 aaKnown RBP11.45□□□□□ -0.58
NUDCD3-203ENST00000460110 TBC1D2BQ9UPU7 963 aa11.45□□□□□ -0.58
NUDCD3-203ENST00000460110 FRAT2O75474 233 aaPredicted RBP11.45□□□□□ -0.58
NUDCD3-203ENST00000460110 HDAC5Q9UQL6 1122 aa11.45□□□□□ -0.58
NUDCD3-203ENST00000460110 EIF5BO60841 1220 aaKnown RBP11.45□□□□□ -0.58
NUDCD3-203ENST00000460110 KIF1BPQ96EK5 621 aa11.45□□□□□ -0.58
NUDCD3-203ENST00000460110 DDB1Q16531 1140 aa11.44□□□□□ -0.58
NUDCD3-203ENST00000460110 CWC27Q6UX04 472 aaKnown RBP11.44□□□□□ -0.58
NUDCD3-203ENST00000460110 KIAA1211Q6ZU35 1233 aa11.44□□□□□ -0.58
NUDCD3-203ENST00000460110 BOLA2Q9H3K6 86 aa11.44□□□□□ -0.58
NUDCD3-203ENST00000460110 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.44□□□□□ -0.58
NUDCD3-203ENST00000460110 NFKBIBQ15653 356 aa11.44□□□□□ -0.58
NUDCD3-203ENST00000460110 NFAT5O94916 1531 aa11.44□□□□□ -0.58
NUDCD3-203ENST00000460110 NPHP1O15259 732 aa11.43□□□□□ -0.58
NUDCD3-203ENST00000460110 FAM98CQ17RN3 349 aaKnown RBP11.43□□□□□ -0.58
NUDCD3-203ENST00000460110 GORABQ5T7V8 394 aa11.43□□□□□ -0.58
NUDCD3-203ENST00000460110 LMBR1LQ6UX01 489 aa11.43□□□□□ -0.58
NUDCD3-203ENST00000460110 GZF1Q9H116 711 aaPredicted RBP11.43□□□□□ -0.58
NUDCD3-203ENST00000460110 TAOK2Q9UL54 1235 aa11.43□□□□□ -0.58
NUDCD3-203ENST00000460110 DIAPH3Q9NSV4 1193 aa11.43□□□□□ -0.58
NUDCD3-203ENST00000460110 NDUFB9Q9Y6M9 179 aa11.43□□□□□ -0.58
NUDCD3-203ENST00000460110 HSP90AB4PQ58FF6 505 aa11.43□□□□□ -0.58
NUDCD3-203ENST00000460110 DNAJC2Q99543 621 aaKnown RBP11.43□□□□□ -0.58
NUDCD3-203ENST00000460110 REC8O95072 547 aa11.42□□□□□ -0.58
NUDCD3-203ENST00000460110 STARD3NLO95772 234 aa11.42□□□□□ -0.58
NUDCD3-203ENST00000460110 IGKV5-2P06315 115 aa11.42□□□□□ -0.58
NUDCD3-203ENST00000460110 FOXD4L6Q3SYB3 417 aaPredicted RBP11.42□□□□□ -0.58
NUDCD3-203ENST00000460110 FOXD4L3Q6VB84 417 aaPredicted RBP11.42□□□□□ -0.58
NUDCD3-203ENST00000460110 PIGBQ92521 554 aa11.42□□□□□ -0.58
NUDCD3-203ENST00000460110 GPATCH3Q96I76 525 aa11.42□□□□□ -0.58
NUDCD3-203ENST00000460110 RGS12O14924 1447 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms