RNA–Protein interactions for RNA: ENST00000455624.6

SCN5A-210, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 7,170 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-210ENST00000455624 GOLGA8AA7E2F4 631 aa11.74□□□□□ -0.53
SCN5A-210ENST00000455624 GOLGA8BA8MQT2 603 aa11.74□□□□□ -0.53
SCN5A-210ENST00000455624 CTNNA2P26232 953 aa11.74□□□□□ -0.53
SCN5A-210ENST00000455624 RPAP2Q8IXW5 612 aaPredicted RBP11.74□□□□□ -0.53
SCN5A-210ENST00000455624 PTCD1O75127 700 aaKnown RBP11.74□□□□□ -0.53
SCN5A-210ENST00000455624 PDIA4P13667 645 aaKnown RBP11.74□□□□□ -0.53
SCN5A-210ENST00000455624 GRIPAP1Q4V328 841 aa11.74□□□□□ -0.53
SCN5A-210ENST00000455624 SMARCA5O60264 1052 aaPredicted RBP11.74□□□□□ -0.53
SCN5A-210ENST00000455624 MPRIPQ6WCQ1 1025 aa11.74□□□□□ -0.53
SCN5A-210ENST00000455624 CATIPQ7Z7H3 387 aa11.74□□□□□ -0.53
SCN5A-210ENST00000455624 KIF20AO95235 890 aa11.74□□□□□ -0.53
SCN5A-210ENST00000455624 MX1P20591 662 aa11.74□□□□□ -0.53
SCN5A-210ENST00000455624 KLHL10Q6JEL2 608 aa11.74□□□□□ -0.53
SCN5A-210ENST00000455624 DAPK1P53355 1430 aa11.74□□□□□ -0.53
SCN5A-210ENST00000455624 KIF5CO60282 957 aa11.74□□□□□ -0.53
SCN5A-210ENST00000455624 ZNF213O14771 459 aa11.73□□□□□ -0.53
SCN5A-210ENST00000455624 ZSCAN12O43309 604 aa11.73□□□□□ -0.53
SCN5A-210ENST00000455624 TNNT1P13805 278 aa11.73□□□□□ -0.53
SCN5A-210ENST00000455624 ST5P78524 1137 aa11.73□□□□□ -0.53
SCN5A-210ENST00000455624 IFFO1Q0D2I5 559 aa11.73□□□□□ -0.53
SCN5A-210ENST00000455624 MCM10Q7L590 875 aa11.73□□□□□ -0.53
SCN5A-210ENST00000455624 IQCA1Q86XH1 822 aa11.73□□□□□ -0.53
SCN5A-210ENST00000455624 CEP63Q96MT8 703 aa11.73□□□□□ -0.53
SCN5A-210ENST00000455624 NUP88Q99567 741 aaPredicted RBP11.73□□□□□ -0.53
SCN5A-210ENST00000455624 GBP3Q9H0R5 595 aa11.73□□□□□ -0.53
SCN5A-210ENST00000455624 RNF41Q9H4P4 317 aaPredicted RBP11.73□□□□□ -0.53
SCN5A-210ENST00000455624 AKNAQ7Z591 1439 aa11.73□□□□□ -0.53
SCN5A-210ENST00000455624 GSTTP1A0A1W2PQM5 241 aa11.73□□□□□ -0.53
SCN5A-210ENST00000455624 MCM3P25205 808 aa11.73□□□□□ -0.53
SCN5A-210ENST00000455624 BOLA2Q9H3K6 86 aa11.73□□□□□ -0.53
SCN5A-210ENST00000455624 SNAPC4Q5SXM2 1469 aa11.73□□□□□ -0.53
SCN5A-210ENST00000455624 SHTN1A0MZ66 631 aa11.73□□□□□ -0.53
SCN5A-210ENST00000455624 HMGB1P09429 215 aaKnown RBP11.73□□□□□ -0.53
SCN5A-210ENST00000455624 AMOTQ4VCS5 1084 aa11.73□□□□□ -0.53
SCN5A-210ENST00000455624 HOOK3Q86VS8 718 aa11.73□□□□□ -0.53
SCN5A-210ENST00000455624 FILIP1Q7Z7B0 1213 aa11.73□□□□□ -0.53
SCN5A-210ENST00000455624 LUZP1Q86V48 1076 aa11.73□□□□□ -0.53
SCN5A-210ENST00000455624 CALML4Q96GE6 196 aa11.73□□□□□ -0.53
SCN5A-210ENST00000455624 CCDC194A0A1B0GVG4 234 aa11.72□□□□□ -0.53
SCN5A-210ENST00000455624 BCCIPQ9P287 314 aaKnown RBP eCLIP11.72□□□□□ -0.53
SCN5A-210ENST00000455624 C8orf76Q96K31 380 aa11.72□□□□□ -0.53
SCN5A-210ENST00000455624 PSMD1Q99460 953 aa11.72□□□□□ -0.53
SCN5A-210ENST00000455624 FEZ1Q99689 392 aa11.72□□□□□ -0.53
SCN5A-210ENST00000455624 ANO10Q9NW15 660 aa11.72□□□□□ -0.53
SCN5A-210ENST00000455624 LRPPRCP42704 1394 aaKnown RBP11.72□□□□□ -0.53
SCN5A-210ENST00000455624 MAP9Q49MG5 647 aa11.72□□□□□ -0.53
SCN5A-210ENST00000455624 TMEM57Q8N5G2 664 aa11.72□□□□□ -0.53
SCN5A-210ENST00000455624 CCDC12Q8WUD4 166 aaPredicted RBP11.72□□□□□ -0.53
SCN5A-210ENST00000455624 CRACR2AQ9BSW2 395 aa11.72□□□□□ -0.53
SCN5A-210ENST00000455624 UBE4AQ14139 1066 aa11.72□□□□□ -0.53
SCN5A-210ENST00000455624 CABP5Q9NP86 173 aa11.72□□□□□ -0.53
SCN5A-210ENST00000455624 PLEKHH1Q9ULM0 1364 aa11.72□□□□□ -0.53
SCN5A-210ENST00000455624 TSNARE1Q96NA8 513 aa11.71□□□□□ -0.53
SCN5A-210ENST00000455624 USO1O60763 962 aaKnown RBP11.71□□□□□ -0.53
SCN5A-210ENST00000455624 GLRX3O76003 335 aaKnown RBP11.71□□□□□ -0.53
SCN5A-210ENST00000455624 USP8P40818 1118 aa11.71□□□□□ -0.53
SCN5A-210ENST00000455624 STXBP4Q6ZWJ1 553 aa11.71□□□□□ -0.53
SCN5A-210ENST00000455624 TMX1Q9H3N1 280 aa11.71□□□□□ -0.53
SCN5A-210ENST00000455624 GUCY1B3Q02153 619 aa11.71□□□□□ -0.53
SCN5A-210ENST00000455624 BICD1Q96G01 975 aa11.71□□□□□ -0.53
SCN5A-210ENST00000455624 IFIT3O14879 490 aaKnown RBP11.71□□□□□ -0.54
SCN5A-210ENST00000455624 LMAN1P49257 510 aa11.71□□□□□ -0.54
SCN5A-210ENST00000455624 MRPS9P82933 396 aaKnown RBP11.71□□□□□ -0.54
SCN5A-210ENST00000455624 TAF7Q15545 349 aaPredicted RBP11.71□□□□□ -0.54
SCN5A-210ENST00000455624 ZNF622Q969S3 477 aaKnown RBP eCLIP11.71□□□□□ -0.54
SCN5A-210ENST00000455624 KAT14Q9H8E8 782 aa11.71□□□□□ -0.54
SCN5A-210ENST00000455624 C6orf229H3BNL8 230 aa11.71□□□□□ -0.54
SCN5A-210ENST00000455624 MYO1BO43795 1136 aa11.71□□□□□ -0.54
SCN5A-210ENST00000455624 YEATS4O95619 227 aa11.71□□□□□ -0.54
SCN5A-210ENST00000455624 TTF1Q15361 905 aaPredicted RBP11.71□□□□□ -0.54
SCN5A-210ENST00000455624 SYCP3Q8IZU3 236 aa11.71□□□□□ -0.54
SCN5A-210ENST00000455624 EXOC6BQ9Y2D4 811 aa11.71□□□□□ -0.54
SCN5A-210ENST00000455624 TOP1P11387 765 aaKnown RBP11.71□□□□□ -0.54
SCN5A-210ENST00000455624 DNA2P51530 1060 aa11.71□□□□□ -0.54
SCN5A-210ENST00000455624 PPM1EQ8WY54 764 aa11.71□□□□□ -0.54
SCN5A-210ENST00000455624 PUF60Q9UHX1 559 aaKnown RBP11.71□□□□□ -0.54
SCN5A-210ENST00000455624 POLA1P09884 1462 aaPredicted RBP11.7□□□□□ -0.54
SCN5A-210ENST00000455624 HLA-DOAP06340 250 aa11.7□□□□□ -0.54
SCN5A-210ENST00000455624 AMPD3Q01432 767 aa11.7□□□□□ -0.54
SCN5A-210ENST00000455624 TDRD12Q587J7 1177 aaKnown RBP11.7□□□□□ -0.54
SCN5A-210ENST00000455624 MACROD2A1Z1Q3 448 aa11.7□□□□□ -0.54
SCN5A-210ENST00000455624 GSTO1P78417 241 aa11.7□□□□□ -0.54
SCN5A-210ENST00000455624 SLC4A8Q2Y0W8 1093 aa11.7□□□□□ -0.54
SCN5A-210ENST00000455624 TMPOP42166 694 aaKnown RBP11.7□□□□□ -0.54
SCN5A-210ENST00000455624 CETN1Q12798 172 aa11.7□□□□□ -0.54
SCN5A-210ENST00000455624 SSX2IPQ9Y2D8 614 aa11.7□□□□□ -0.54
SCN5A-210ENST00000455624 SAMM50Q9Y512 469 aa11.7□□□□□ -0.54
SCN5A-210ENST00000455624 TTC21AQ8NDW8 1320 aa11.7□□□□□ -0.54
SCN5A-210ENST00000455624 CCDC40Q4G0X9 1142 aa11.7□□□□□ -0.54
SCN5A-210ENST00000455624 TMCO3Q6UWJ1 677 aa11.7□□□□□ -0.54
SCN5A-210ENST00000455624 PLCD3Q8N3E9 789 aa11.7□□□□□ -0.54
SCN5A-210ENST00000455624 ALS2CR12Q96Q35 445 aa11.7□□□□□ -0.54
SCN5A-210ENST00000455624 FERMT1Q9BQL6 677 aa11.7□□□□□ -0.54
SCN5A-210ENST00000455624 HYPKQ9NX55 129 aa11.7□□□□□ -0.54
SCN5A-210ENST00000455624 ERICH4A6NGS2 130 aa11.69□□□□□ -0.54
SCN5A-210ENST00000455624 PRC1O43663 620 aa11.69□□□□□ -0.54
SCN5A-210ENST00000455624 FAM114A1Q8IWE2 563 aa11.69□□□□□ -0.54
SCN5A-210ENST00000455624 FERP16591 822 aa11.69□□□□□ -0.54
SCN5A-210ENST00000455624 CCDC183Q5T5S1 534 aa11.69□□□□□ -0.54
SCN5A-210ENST00000455624 CNNM3Q8NE01 707 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms