RNA–Protein interactions for RNA: ENST00000453163.6

PDCD2-204, Transcript of programmed cell death 2, humanhuman

TSL 1 (best) BASIC

Gene PDCD2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-204ENST00000453163 SSH3Q8TE77 659 aa24.92■■□□□ 1.58
PDCD2-204ENST00000453163 USP26Q9BXU7 913 aa24.92■■□□□ 1.58
PDCD2-204ENST00000453163 EIF5BO60841 1220 aaKnown RBP24.92■■□□□ 1.58
PDCD2-204ENST00000453163 PPP1R42Q7Z4L9 355 aa24.92■■□□□ 1.58
PDCD2-204ENST00000453163 KDM6AO15550 1401 aaPredicted RBP24.92■■□□□ 1.58
PDCD2-204ENST00000453163 HSP90AB1P08238 724 aaKnown RBP24.91■■□□□ 1.58
PDCD2-204ENST00000453163 MX1P20591 662 aa24.91■■□□□ 1.58
PDCD2-204ENST00000453163 CSB-PGBD3P0DP91 1061 aa24.9■■□□□ 1.58
PDCD2-204ENST00000453163 TATP17735 454 aaPredicted RBP24.89■■□□□ 1.58
PDCD2-204ENST00000453163 SPATA31A3Q5VYP0 1347 aa24.89■■□□□ 1.57
PDCD2-204ENST00000453163 C5P01031 1676 aa24.89■■□□□ 1.57
PDCD2-204ENST00000453163 DDIT3P35638 169 aa24.89■■□□□ 1.57
PDCD2-204ENST00000453163 POLA2Q14181 598 aa24.89■■□□□ 1.57
PDCD2-204ENST00000453163 MAP3K2Q9Y2U5 619 aa24.89■■□□□ 1.57
PDCD2-204ENST00000453163 SLC39A6Q13433 755 aa24.88■■□□□ 1.57
PDCD2-204ENST00000453163 IL1RAPL2Q9NP60 686 aa24.88■■□□□ 1.57
PDCD2-204ENST00000453163 SRGAP3O43295 1099 aa24.88■■□□□ 1.57
PDCD2-204ENST00000453163 PHKG2P15735 406 aa24.88■■□□□ 1.57
PDCD2-204ENST00000453163 K7ELQ4 463 aaPredicted RBP24.87■■□□□ 1.57
PDCD2-204ENST00000453163 SURF6O75683 361 aaKnown RBP24.87■■□□□ 1.57
PDCD2-204ENST00000453163 SLC52A2Q9HAB3 445 aa24.86■■□□□ 1.57
PDCD2-204ENST00000453163 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.86■■□□□ 1.57
PDCD2-204ENST00000453163 SPG7Q9UQ90 795 aa24.86■■□□□ 1.57
PDCD2-204ENST00000453163 ZNF790Q6PG37 636 aa24.86■■□□□ 1.57
PDCD2-204ENST00000453163 ERC2O15083 957 aa24.85■■□□□ 1.57
PDCD2-204ENST00000453163 KSR2Q6VAB6 950 aa24.85■■□□□ 1.57
PDCD2-204ENST00000453163 ABCC6O95255 1503 aa24.85■■□□□ 1.57
PDCD2-204ENST00000453163 REC8O95072 547 aa24.84■■□□□ 1.57
PDCD2-204ENST00000453163 NFATC2IPQ8NCF5 419 aa24.84■■□□□ 1.57
PDCD2-204ENST00000453163 STAP2Q9UGK3 403 aa24.84■■□□□ 1.57
PDCD2-204ENST00000453163 RABEP1Q15276 862 aa24.84■■□□□ 1.57
PDCD2-204ENST00000453163 FOXD4L1Q9NU39 408 aa24.84■■□□□ 1.57
PDCD2-204ENST00000453163 HYPKQ9NX55 129 aa24.83■■□□□ 1.57
PDCD2-204ENST00000453163 CWF19L2Q2TBE0 894 aaKnown RBP24.83■■□□□ 1.57
PDCD2-204ENST00000453163 BRINP3Q76B58 766 aa24.83■■□□□ 1.57
PDCD2-204ENST00000453163 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.83■■□□□ 1.57
PDCD2-204ENST00000453163 PKD1L3Q7Z443 1732 aa24.83■■□□□ 1.56
PDCD2-204ENST00000453163 RAB11FIP3O75154 756 aa24.82■■□□□ 1.56
PDCD2-204ENST00000453163 NUTM1Q86Y26 1132 aa24.82■■□□□ 1.56
PDCD2-204ENST00000453163 IFNL2Q8IZJ0 200 aa24.82■■□□□ 1.56
PDCD2-204ENST00000453163 TRIM6-TRIM34B2RNG4 842 aa24.82■■□□□ 1.56
PDCD2-204ENST00000453163 HSP90AA1P07900 732 aaKnown RBP24.82■■□□□ 1.56
PDCD2-204ENST00000453163 MCM4P33991 863 aa24.82■■□□□ 1.56
PDCD2-204ENST00000453163 RHPN1Q8TCX5 695 aa24.82■■□□□ 1.56
PDCD2-204ENST00000453163 DDX21Q9NR30 783 aaKnown RBP eCLIP24.82■■□□□ 1.56
PDCD2-204ENST00000453163 PDIA6Q15084 440 aa24.81■■□□□ 1.56
PDCD2-204ENST00000453163 RILPL2Q969X0 211 aa24.81■■□□□ 1.56
PDCD2-204ENST00000453163 CYP27B1O15528 508 aa24.81■■□□□ 1.56
PDCD2-204ENST00000453163 AIMP1Q12904 312 aaKnown RBP24.81■■□□□ 1.56
PDCD2-204ENST00000453163 CPDO75976 1380 aa24.81■■□□□ 1.56
PDCD2-204ENST00000453163 ALDH1L1O75891 902 aa24.8■■□□□ 1.56
PDCD2-204ENST00000453163 C9orf78Q9NZ63 289 aaPredicted RBP24.8■■□□□ 1.56
PDCD2-204ENST00000453163 STRCQ7RTU9 1775 aa24.8■■□□□ 1.56
PDCD2-204ENST00000453163 UNC5CLQ8IV45 518 aa24.8■■□□□ 1.56
PDCD2-204ENST00000453163 AK9Q5TCS8 1911 aa24.8■■□□□ 1.56
PDCD2-204ENST00000453163 FAM43AQ8N2R8 423 aa24.79■■□□□ 1.56
PDCD2-204ENST00000453163 MRC1P22897 1456 aa24.79■■□□□ 1.56
PDCD2-204ENST00000453163 AOX1Q06278 1338 aa24.79■■□□□ 1.56
PDCD2-204ENST00000453163 KIF1BPQ96EK5 621 aa24.79■■□□□ 1.56
PDCD2-204ENST00000453163 ESYT1Q9BSJ8 1104 aa24.78■■□□□ 1.56
PDCD2-204ENST00000453163 ZNF496Q96IT1 587 aaPredicted RBP24.78■■□□□ 1.56
PDCD2-204ENST00000453163 CIZ1Q9ULV3 898 aaPredicted RBP24.78■■□□□ 1.56
PDCD2-204ENST00000453163 CHMLP26374 656 aa24.77■■□□□ 1.56
PDCD2-204ENST00000453163 MTX1Q13505 466 aa24.77■■□□□ 1.56
PDCD2-204ENST00000453163 DCAF5Q96JK2 942 aa24.77■■□□□ 1.56
PDCD2-204ENST00000453163 DDX58O95786 925 aaKnown RBP24.76■■□□□ 1.55
PDCD2-204ENST00000453163 MYL6BP14649 208 aa24.76■■□□□ 1.55
PDCD2-204ENST00000453163 LINS1Q8NG48 757 aa24.76■■□□□ 1.55
PDCD2-204ENST00000453163 PI4K2BQ8TCG2 481 aa24.75■■□□□ 1.55
PDCD2-204ENST00000453163 TNPO1Q92973 898 aaKnown RBP24.74■■□□□ 1.55
PDCD2-204ENST00000453163 PLEKHG2Q9H7P9 1386 aa24.74■■□□□ 1.55
PDCD2-204ENST00000453163 GRM8O00222 908 aa24.73■■□□□ 1.55
PDCD2-204ENST00000453163 MAP4K4O95819 1239 aaPredicted RBP24.73■■□□□ 1.55
PDCD2-204ENST00000453163 RAB3GAP1Q15042 981 aa24.73■■□□□ 1.55
PDCD2-204ENST00000453163 OS9Q13438 667 aaPredicted RBP24.73■■□□□ 1.55
PDCD2-204ENST00000453163 HSP90AB4PQ58FF6 505 aa24.73■■□□□ 1.55
PDCD2-204ENST00000453163 RIC3Q7Z5B4 369 aa24.73■■□□□ 1.55
PDCD2-204ENST00000453163 TTC5Q8N0Z6 440 aa24.73■■□□□ 1.55
PDCD2-204ENST00000453163 PRDM11Q9NQV5 511 aa24.72■■□□□ 1.55
PDCD2-204ENST00000453163 ZNF335Q9H4Z2 1342 aaPredicted RBP24.72■■□□□ 1.55
PDCD2-204ENST00000453163 XAGE3Q8WTP9 111 aa24.72■■□□□ 1.55
PDCD2-204ENST00000453163 SUCLG2Q96I99 432 aa24.72■■□□□ 1.55
PDCD2-204ENST00000453163 PA2G4Q9UQ80 394 aaKnown RBP24.72■■□□□ 1.55
PDCD2-204ENST00000453163 USP16Q9Y5T5 823 aa24.72■■□□□ 1.55
PDCD2-204ENST00000453163 IGKV5-2P06315 115 aa24.71■■□□□ 1.55
PDCD2-204ENST00000453163 KAZALD1Q96I82 304 aa24.71■■□□□ 1.55
PDCD2-204ENST00000453163 PARP4Q9UKK3 1724 aaKnown RBP24.71■■□□□ 1.55
PDCD2-204ENST00000453163 PIP4K2AP48426 406 aaPredicted RBP24.71■■□□□ 1.55
PDCD2-204ENST00000453163 ANO2Q9NQ90 1003 aa24.71■■□□□ 1.55
PDCD2-204ENST00000453163 ST18O60284 1047 aa24.7■■□□□ 1.55
PDCD2-204ENST00000453163 UTYO14607 1347 aa24.7■■□□□ 1.55
PDCD2-204ENST00000453163 COPS6Q7L5N1 327 aa24.7■■□□□ 1.54
PDCD2-204ENST00000453163 IL25Q9H293 177 aa24.7■■□□□ 1.54
PDCD2-204ENST00000453163 SNRPA1P09661 255 aaKnown RBP24.69■■□□□ 1.54
PDCD2-204ENST00000453163 BICC1Q9H694 974 aaKnown RBP24.69■■□□□ 1.54
PDCD2-204ENST00000453163 SLAIN2Q9P270 581 aa24.69■■□□□ 1.54
PDCD2-204ENST00000453163 GLI3P10071 1580 aa24.69■■□□□ 1.54
PDCD2-204ENST00000453163 SOS2Q07890 1332 aaPredicted RBP24.69■■□□□ 1.54
PDCD2-204ENST00000453163 CABP4P57796 275 aa24.69■■□□□ 1.54
PDCD2-204ENST00000453163 WDR17Q8IZU2 1322 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms