RNA–Protein interactions for RNA: ENST00000449086.5

LINC00954-202, long intergenic non-protein coding RNA 954, humanhuman

TSL 1 (best) BASIC

Gene LINC00954, Length 2,995 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-202ENST00000449086 SMC4Q9NTJ3 1288 aa10.03□□□□□ -0.8
LINC00954-202ENST00000449086 HTATSF1O43719 755 aaKnown RBP10.02□□□□□ -0.8
LINC00954-202ENST00000449086 SKOR2Q2VWA4 1001 aaPredicted RBP10.02□□□□□ -0.8
LINC00954-202ENST00000449086 SSFA2P28290 1259 aa10.02□□□□□ -0.81
LINC00954-202ENST00000449086 ZKSCAN2Q63HK3 967 aa10.02□□□□□ -0.81
LINC00954-202ENST00000449086 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.02□□□□□ -0.81
LINC00954-202ENST00000449086 IFNL2Q8IZJ0 200 aa10.02□□□□□ -0.81
LINC00954-202ENST00000449086 PRDM10Q9NQV6 1147 aa10.02□□□□□ -0.81
LINC00954-202ENST00000449086 AKAP4Q5JQC9 854 aa10.02□□□□□ -0.81
LINC00954-202ENST00000449086 TSR2Q969E8 191 aaKnown RBP10.02□□□□□ -0.81
LINC00954-202ENST00000449086 KRT27Q7Z3Y8 459 aa10.01□□□□□ -0.81
LINC00954-202ENST00000449086 RBM42Q9BTD8 480 aaKnown RBP10.01□□□□□ -0.81
LINC00954-202ENST00000449086 PHKG2P15735 406 aa10.01□□□□□ -0.81
LINC00954-202ENST00000449086 CAVIN1Q6NZI2 390 aaKnown RBP10.01□□□□□ -0.81
LINC00954-202ENST00000449086 MRC1P22897 1456 aa10.01□□□□□ -0.81
LINC00954-202ENST00000449086 OFD1O75665 1012 aa10□□□□□ -0.81
LINC00954-202ENST00000449086 MAP3K5Q99683 1374 aa10□□□□□ -0.81
LINC00954-202ENST00000449086 NHSQ6T4R5 1651 aa10□□□□□ -0.81
LINC00954-202ENST00000449086 UQCRHLA0A096LP55 91 aa10□□□□□ -0.81
LINC00954-202ENST00000449086 CD2BP2O95400 341 aaKnown RBP10□□□□□ -0.81
LINC00954-202ENST00000449086 UQCRHP07919 91 aa10□□□□□ -0.81
LINC00954-202ENST00000449086 RIPK4P57078 832 aa10□□□□□ -0.81
LINC00954-202ENST00000449086 LMOD3Q0VAK6 560 aa10□□□□□ -0.81
LINC00954-202ENST00000449086 NFE2L2Q16236 605 aa10□□□□□ -0.81
LINC00954-202ENST00000449086 MTHFSDQ2M296 383 aaKnown RBP10□□□□□ -0.81
LINC00954-202ENST00000449086 C1orf141Q5JVX7 400 aa10□□□□□ -0.81
LINC00954-202ENST00000449086 MCTP1Q6DN14 999 aa10□□□□□ -0.81
LINC00954-202ENST00000449086 ZNF530Q6P9A1 599 aaPredicted RBP10□□□□□ -0.81
LINC00954-202ENST00000449086 SCN11AQ9UI33 1791 aa10□□□□□ -0.81
LINC00954-202ENST00000449086 A0A0G2JS52 829 aa9.99□□□□□ -0.81
LINC00954-202ENST00000449086 CYP27B1O15528 508 aa9.99□□□□□ -0.81
LINC00954-202ENST00000449086 RAB3GAP1Q15042 981 aa9.99□□□□□ -0.81
LINC00954-202ENST00000449086 FAM196AQ6ZSG2 479 aa9.99□□□□□ -0.81
LINC00954-202ENST00000449086 DCAF5Q96JK2 942 aa9.99□□□□□ -0.81
LINC00954-202ENST00000449086 MARCH10Q8NA82 808 aaPredicted RBP9.99□□□□□ -0.81
LINC00954-202ENST00000449086 PHACTR3Q96KR7 559 aa9.99□□□□□ -0.81
LINC00954-202ENST00000449086 CALD1Q05682 793 aaKnown RBP9.99□□□□□ -0.81
LINC00954-202ENST00000449086 AAMPQ13685 434 aa9.99□□□□□ -0.81
LINC00954-202ENST00000449086 ZHX1Q9UKY1 873 aaPredicted RBP9.99□□□□□ -0.81
LINC00954-202ENST00000449086 GNAT3A8MTJ3 354 aa9.98□□□□□ -0.81
LINC00954-202ENST00000449086 CCDC27Q2M243 656 aa9.98□□□□□ -0.81
LINC00954-202ENST00000449086 DOT1LQ8TEK3 1739 aa9.98□□□□□ -0.81
LINC00954-202ENST00000449086 TOGARAM1Q9Y4F4 1720 aa9.98□□□□□ -0.81
LINC00954-202ENST00000449086 DLG5Q8TDM6 1919 aa9.98□□□□□ -0.81
LINC00954-202ENST00000449086 SMC5Q8IY18 1101 aa9.98□□□□□ -0.81
LINC00954-202ENST00000449086 SBF2Q86WG5 1849 aa9.98□□□□□ -0.81
LINC00954-202ENST00000449086 CEMIPQ8WUJ3 1361 aa9.97□□□□□ -0.81
LINC00954-202ENST00000449086 ERVV-2B6SEH9 535 aa9.97□□□□□ -0.81
LINC00954-202ENST00000449086 TMPOP42166 694 aaKnown RBP9.97□□□□□ -0.81
LINC00954-202ENST00000449086 DNTTIP2Q5QJE6 756 aaKnown RBP9.97□□□□□ -0.81
LINC00954-202ENST00000449086 KDM6AO15550 1401 aaPredicted RBP9.97□□□□□ -0.81
LINC00954-202ENST00000449086 TRIM27P14373 513 aa9.97□□□□□ -0.81
LINC00954-202ENST00000449086 ANKRD45Q5TZF3 282 aa9.97□□□□□ -0.81
LINC00954-202ENST00000449086 CIZ1Q9ULV3 898 aaPredicted RBP9.97□□□□□ -0.81
LINC00954-202ENST00000449086 RGPD3A6NKT7 1758 aaPredicted RBP9.97□□□□□ -0.81
LINC00954-202ENST00000449086 RGPD4Q7Z3J3 1758 aa9.97□□□□□ -0.81
LINC00954-202ENST00000449086 SIPA1L3O60292 1781 aaPredicted RBP9.97□□□□□ -0.81
LINC00954-202ENST00000449086 K7ELQ4 463 aaPredicted RBP9.96□□□□□ -0.81
LINC00954-202ENST00000449086 EXOSC9Q06265 439 aaKnown RBP9.96□□□□□ -0.81
LINC00954-202ENST00000449086 FOXD4L5Q5VV16 416 aaPredicted RBP9.96□□□□□ -0.81
LINC00954-202ENST00000449086 MPNDQ8N594 471 aa9.96□□□□□ -0.81
LINC00954-202ENST00000449086 DDX54Q8TDD1 881 aaKnown RBP9.96□□□□□ -0.81
LINC00954-202ENST00000449086 FOXD4L4Q8WXT5 416 aaPredicted RBP9.96□□□□□ -0.81
LINC00954-202ENST00000449086 DDX19BQ9UMR2 479 aa9.96□□□□□ -0.81
LINC00954-202ENST00000449086 BAG4O95429 457 aaKnown RBP9.96□□□□□ -0.82
LINC00954-202ENST00000449086 PTMSP20962 102 aa9.96□□□□□ -0.82
LINC00954-202ENST00000449086 RNF214Q8ND24 703 aa9.96□□□□□ -0.82
LINC00954-202ENST00000449086 PPP1R9BQ96SB3 815 aa9.96□□□□□ -0.82
LINC00954-202ENST00000449086 TRIM35Q9UPQ4 493 aa9.96□□□□□ -0.82
LINC00954-202ENST00000449086 PTMAP06454 111 aaKnown RBP9.96□□□□□ -0.82
LINC00954-202ENST00000449086 RTF1Q92541 710 aaKnown RBP9.96□□□□□ -0.82
LINC00954-202ENST00000449086 PAPPAQ13219 1627 aa9.95□□□□□ -0.82
LINC00954-202ENST00000449086 RNMTO43148 476 aaKnown RBP9.95□□□□□ -0.82
LINC00954-202ENST00000449086 RBM25P49756 843 aaKnown RBP9.95□□□□□ -0.82
LINC00954-202ENST00000449086 CCDC125Q86Z20 511 aa9.95□□□□□ -0.82
LINC00954-202ENST00000449086 WDR63Q8IWG1 891 aa9.95□□□□□ -0.82
LINC00954-202ENST00000449086 TMEM57Q8N5G2 664 aa9.95□□□□□ -0.82
LINC00954-202ENST00000449086 SNX21Q969T3 373 aa9.95□□□□□ -0.82
LINC00954-202ENST00000449086 BABAM1Q9NWV8 329 aa9.95□□□□□ -0.82
LINC00954-202ENST00000449086 NOB1Q9ULX3 412 aaKnown RBP9.95□□□□□ -0.82
LINC00954-202ENST00000449086 DDIT3P35638 169 aa9.95□□□□□ -0.82
LINC00954-202ENST00000449086 KLHL40Q2TBA0 621 aa9.95□□□□□ -0.82
LINC00954-202ENST00000449086 TPRNQ4KMQ1 711 aa9.95□□□□□ -0.82
LINC00954-202ENST00000449086 SSH1Q8WYL5 1049 aa9.95□□□□□ -0.82
LINC00954-202ENST00000449086 C1orf115Q9H7X2 142 aa9.95□□□□□ -0.82
LINC00954-202ENST00000449086 PRDM4Q9UKN5 801 aa9.95□□□□□ -0.82
LINC00954-202ENST00000449086 TNS1Q9HBL0 1735 aaKnown RBP9.95□□□□□ -0.82
LINC00954-202ENST00000449086 ITGB4P16144 1822 aa9.95□□□□□ -0.82
LINC00954-202ENST00000449086 AK9Q5TCS8 1911 aa9.94□□□□□ -0.82
LINC00954-202ENST00000449086 BCL11BQ9C0K0 894 aaPredicted RBP9.94□□□□□ -0.82
LINC00954-202ENST00000449086 RBM27Q9P2N5 1060 aaKnown RBP9.94□□□□□ -0.82
LINC00954-202ENST00000449086 ZNF831Q5JPB2 1677 aa9.94□□□□□ -0.82
LINC00954-202ENST00000449086 PRPF40AO75400 957 aaKnown RBP9.94□□□□□ -0.82
LINC00954-202ENST00000449086 ZSCAN23Q3MJ62 389 aa9.94□□□□□ -0.82
LINC00954-202ENST00000449086 MAP7D2Q96T17 732 aa9.94□□□□□ -0.82
LINC00954-202ENST00000449086 RBSNQ9H1K0 784 aa9.94□□□□□ -0.82
LINC00954-202ENST00000449086 CICQ96RK0 1608 aaPredicted RBP9.94□□□□□ -0.82
LINC00954-202ENST00000449086 HMGB2P26583 209 aaKnown RBP9.93□□□□□ -0.82
LINC00954-202ENST00000449086 PRIM1P49642 420 aaKnown RBP9.93□□□□□ -0.82
LINC00954-202ENST00000449086 ATF7IPQ6VMQ6 1270 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms