RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 TTLL12Q14166 644 aaPredicted RBP11.93□□□□□ -0.5
SCN10A-201ENST00000449082 CCDC96Q2M329 555 aa11.93□□□□□ -0.5
SCN10A-201ENST00000449082 LDHCP07864 332 aa11.93□□□□□ -0.5
SCN10A-201ENST00000449082 PPP1R12BO60237 982 aaPredicted RBP11.92□□□□□ -0.5
SCN10A-201ENST00000449082 RFC4P35249 363 aa11.92□□□□□ -0.5
SCN10A-201ENST00000449082 DNAI2Q9GZS0 605 aa11.92□□□□□ -0.5
SCN10A-201ENST00000449082 SEPT11Q9NVA2 429 aaKnown RBP11.92□□□□□ -0.5
SCN10A-201ENST00000449082 PPP4R3AQ6IN85 833 aa11.92□□□□□ -0.5
SCN10A-201ENST00000449082 PHAXQ9H814 394 aaKnown RBP11.92□□□□□ -0.5
SCN10A-201ENST00000449082 SNRPA1P09661 255 aaKnown RBP11.92□□□□□ -0.5
SCN10A-201ENST00000449082 ANKRD36BQ8N2N9 1353 aa11.92□□□□□ -0.5
SCN10A-201ENST00000449082 EHMT1Q9H9B1 1298 aa11.92□□□□□ -0.5
SCN10A-201ENST00000449082 TTC21AQ8NDW8 1320 aa11.92□□□□□ -0.5
SCN10A-201ENST00000449082 ZNF608Q9ULD9 1512 aaPredicted RBP11.92□□□□□ -0.5
SCN10A-201ENST00000449082 TOM1O60784 492 aa11.92□□□□□ -0.5
SCN10A-201ENST00000449082 UPF3BQ9BZI7 483 aaKnown RBP11.92□□□□□ -0.5
SCN10A-201ENST00000449082 SLC12A7Q9Y666 1083 aa11.92□□□□□ -0.5
SCN10A-201ENST00000449082 SH2B1Q9NRF2 756 aaPredicted RBP11.91□□□□□ -0.5
SCN10A-201ENST00000449082 ZNF219Q9P2Y4 722 aaPredicted RBP11.91□□□□□ -0.5
SCN10A-201ENST00000449082 PIK3R4Q99570 1358 aa11.91□□□□□ -0.5
SCN10A-201ENST00000449082 ST5P78524 1137 aa11.91□□□□□ -0.5
SCN10A-201ENST00000449082 CCDC83Q8IWF9 413 aa11.91□□□□□ -0.5
SCN10A-201ENST00000449082 LDHAL6AQ6ZMR3 332 aa11.91□□□□□ -0.5
SCN10A-201ENST00000449082 RAB34Q9BZG1 259 aa11.91□□□□□ -0.5
SCN10A-201ENST00000449082 SPTY2D1Q68D10 685 aaPredicted RBP11.91□□□□□ -0.5
SCN10A-201ENST00000449082 POTEJP0CG39 1038 aa11.9□□□□□ -0.5
SCN10A-201ENST00000449082 CHRNA2Q15822 529 aa11.9□□□□□ -0.5
SCN10A-201ENST00000449082 SKIDA1Q1XH10 827 aa11.9□□□□□ -0.5
SCN10A-201ENST00000449082 EVI5LQ96CN4 794 aa11.9□□□□□ -0.5
SCN10A-201ENST00000449082 NPHP3Q7Z494 1330 aa11.9□□□□□ -0.5
SCN10A-201ENST00000449082 BAG3O95817 575 aa11.9□□□□□ -0.5
SCN10A-201ENST00000449082 EIF5P55010 431 aaKnown RBP11.9□□□□□ -0.5
SCN10A-201ENST00000449082 C8orf76Q96K31 380 aa11.9□□□□□ -0.5
SCN10A-201ENST00000449082 SCLT1Q96NL6 688 aa11.9□□□□□ -0.5
SCN10A-201ENST00000449082 NEFHP12036 1026 aa11.89□□□□□ -0.51
SCN10A-201ENST00000449082 CATIPQ7Z7H3 387 aa11.89□□□□□ -0.51
SCN10A-201ENST00000449082 UHRF1BP1LA0JNW5 1464 aa11.89□□□□□ -0.51
SCN10A-201ENST00000449082 SSRP1Q08945 709 aaKnown RBP11.89□□□□□ -0.51
SCN10A-201ENST00000449082 TMEM266Q2M3C6 531 aa11.89□□□□□ -0.51
SCN10A-201ENST00000449082 IFIT3O14879 490 aaKnown RBP11.89□□□□□ -0.51
SCN10A-201ENST00000449082 HMGN5P82970 282 aaKnown RBP11.89□□□□□ -0.51
SCN10A-201ENST00000449082 ANKRD18AQ8IVF6 992 aa11.89□□□□□ -0.51
SCN10A-201ENST00000449082 ZCRB1Q8TBF4 217 aaKnown RBP11.89□□□□□ -0.51
SCN10A-201ENST00000449082 ZNF397Q8NF99 534 aaPredicted RBP11.89□□□□□ -0.51
SCN10A-201ENST00000449082 MAP3K11Q16584 847 aa11.88□□□□□ -0.51
SCN10A-201ENST00000449082 ZNF622Q969S3 477 aaKnown RBP eCLIP11.88□□□□□ -0.51
SCN10A-201ENST00000449082 TSG101Q99816 390 aa11.88□□□□□ -0.51
SCN10A-201ENST00000449082 ECHDC1Q9NTX5 307 aa11.88□□□□□ -0.51
SCN10A-201ENST00000449082 GOLGA6L10A6NI86 522 aa11.88□□□□□ -0.51
SCN10A-201ENST00000449082 ATP5J2-PTCD1G3V325 749 aa11.88□□□□□ -0.51
SCN10A-201ENST00000449082 PLEKHH1Q9ULM0 1364 aa11.88□□□□□ -0.51
SCN10A-201ENST00000449082 GOLGA8AA7E2F4 631 aa11.88□□□□□ -0.51
SCN10A-201ENST00000449082 GOLGA8BA8MQT2 603 aa11.88□□□□□ -0.51
SCN10A-201ENST00000449082 CCDC152Q4G0S7 254 aa11.88□□□□□ -0.51
SCN10A-201ENST00000449082 RPRD2Q5VT52 1461 aaKnown RBP11.88□□□□□ -0.51
SCN10A-201ENST00000449082 IL16Q14005 1332 aa11.88□□□□□ -0.51
SCN10A-201ENST00000449082 NEBLO76041 1014 aa11.88□□□□□ -0.51
SCN10A-201ENST00000449082 WDR78Q5VTH9 848 aa11.88□□□□□ -0.51
SCN10A-201ENST00000449082 MTERF4Q7Z6M4 381 aaKnown RBP11.88□□□□□ -0.51
SCN10A-201ENST00000449082 HLA-DOAP06340 250 aa11.88□□□□□ -0.51
SCN10A-201ENST00000449082 NBPF6Q5VWK0 638 aa11.88□□□□□ -0.51
SCN10A-201ENST00000449082 NBPF5PQ86XG9 351 aaPredicted RBP11.88□□□□□ -0.51
SCN10A-201ENST00000449082 NBPF4Q96M43 638 aa11.88□□□□□ -0.51
SCN10A-201ENST00000449082 CABP5Q9NP86 173 aa11.88□□□□□ -0.51
SCN10A-201ENST00000449082 UBAP1LF5GYI3 381 aa11.87□□□□□ -0.51
SCN10A-201ENST00000449082 SEPT7Q16181 437 aaKnown RBP11.87□□□□□ -0.51
SCN10A-201ENST00000449082 IQCEQ6IPM2 695 aa11.87□□□□□ -0.51
SCN10A-201ENST00000449082 PLCH2O75038 1416 aa11.87□□□□□ -0.51
SCN10A-201ENST00000449082 CCDC194A0A1B0GVG4 234 aa11.87□□□□□ -0.51
SCN10A-201ENST00000449082 IBSPP21815 317 aaPredicted RBP11.87□□□□□ -0.51
SCN10A-201ENST00000449082 NLRP5P59047 1200 aa11.87□□□□□ -0.51
SCN10A-201ENST00000449082 PDE4BQ07343 736 aa11.87□□□□□ -0.51
SCN10A-201ENST00000449082 UBE3BQ7Z3V4 1068 aa11.87□□□□□ -0.51
SCN10A-201ENST00000449082 CCDC12Q8WUD4 166 aaPredicted RBP11.87□□□□□ -0.51
SCN10A-201ENST00000449082 ASXL2Q76L83 1435 aa11.87□□□□□ -0.51
SCN10A-201ENST00000449082 ZRSR2Q15696 482 aaKnown RBP11.87□□□□□ -0.51
SCN10A-201ENST00000449082 PAXIP1Q6ZW49 1069 aaPredicted RBP11.87□□□□□ -0.51
SCN10A-201ENST00000449082 MBIPQ9NS73 344 aa11.87□□□□□ -0.51
SCN10A-201ENST00000449082 DUOX2Q9NRD8 1548 aa11.87□□□□□ -0.51
SCN10A-201ENST00000449082 PI4KAP2A4QPH2 592 aa11.87□□□□□ -0.51
SCN10A-201ENST00000449082 UQCRFS1P1P0C7P4 283 aa11.87□□□□□ -0.51
SCN10A-201ENST00000449082 GSTO1P78417 241 aa11.87□□□□□ -0.51
SCN10A-201ENST00000449082 PI4KAP1Q8N8J0 262 aa11.87□□□□□ -0.51
SCN10A-201ENST00000449082 SCAND2PQ9GZW5 306 aaPredicted RBP11.87□□□□□ -0.51
SCN10A-201ENST00000449082 RAPGEF6Q8TEU7 1601 aa11.87□□□□□ -0.51
SCN10A-201ENST00000449082 GOLIM4O00461 696 aa11.87□□□□□ -0.51
SCN10A-201ENST00000449082 TRIM27P14373 513 aa11.87□□□□□ -0.51
SCN10A-201ENST00000449082 AXDND1Q5T1B0 1012 aaPredicted RBP11.87□□□□□ -0.51
SCN10A-201ENST00000449082 ANKRD13DQ6ZTN6 518 aa11.87□□□□□ -0.51
SCN10A-201ENST00000449082 SMARCC1Q92922 1105 aaPredicted RBP11.87□□□□□ -0.51
SCN10A-201ENST00000449082 FEZ1Q99689 392 aa11.87□□□□□ -0.51
SCN10A-201ENST00000449082 C11orf95C9JLR9 678 aaPredicted RBP11.86□□□□□ -0.51
SCN10A-201ENST00000449082 EPB41L2O43491 1005 aaKnown RBP11.86□□□□□ -0.51
SCN10A-201ENST00000449082 BAG4O95429 457 aaKnown RBP11.86□□□□□ -0.51
SCN10A-201ENST00000449082 KIF5BP33176 963 aa11.86□□□□□ -0.51
SCN10A-201ENST00000449082 FERMT3Q86UX7 667 aa11.86□□□□□ -0.51
SCN10A-201ENST00000449082 MYO1BO43795 1136 aa11.86□□□□□ -0.51
SCN10A-201ENST00000449082 GPATCH8Q9UKJ3 1502 aaKnown RBP11.86□□□□□ -0.51
SCN10A-201ENST00000449082 THOC2Q8NI27 1593 aaKnown RBP11.86□□□□□ -0.51
SCN10A-201ENST00000449082 A2MP01023 1474 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms