RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 MBD3O95983 291 aa16.58■□□□□ 0.25
POLR1B-209ENST00000448770 RASEFQ8IZ41 740 aa16.58■□□□□ 0.25
POLR1B-209ENST00000448770 MCCP23508 829 aa16.58■□□□□ 0.24
POLR1B-209ENST00000448770 HOXC9P31274 260 aa16.58■□□□□ 0.24
POLR1B-209ENST00000448770 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.58■□□□□ 0.24
POLR1B-209ENST00000448770 PPP1R42Q7Z4L9 355 aa16.58■□□□□ 0.24
POLR1B-209ENST00000448770 USP48Q86UV5 1035 aa16.58■□□□□ 0.24
POLR1B-209ENST00000448770 AMOTL2Q9Y2J4 779 aa16.58■□□□□ 0.24
POLR1B-209ENST00000448770 PXDNLA1KZ92 1463 aa16.57■□□□□ 0.24
POLR1B-209ENST00000448770 UBTFL1P0CB47 393 aaPredicted RBP16.57■□□□□ 0.24
POLR1B-209ENST00000448770 NGDNQ8NEJ9 315 aaKnown RBP16.57■□□□□ 0.24
POLR1B-209ENST00000448770 LTV1Q96GA3 475 aaPredicted RBP16.57■□□□□ 0.24
POLR1B-209ENST00000448770 MAP3K5Q99683 1374 aa16.57■□□□□ 0.24
POLR1B-209ENST00000448770 CEBPAP49715 358 aaPredicted RBP16.57■□□□□ 0.24
POLR1B-209ENST00000448770 SRCIN1Q9C0H9 1055 aa16.57■□□□□ 0.24
POLR1B-209ENST00000448770 NBPF7P0C2Y1 421 aaPredicted RBP16.56■□□□□ 0.24
POLR1B-209ENST00000448770 CPA1P15085 419 aa16.56■□□□□ 0.24
POLR1B-209ENST00000448770 RBM10P98175 930 aaKnown RBP16.56■□□□□ 0.24
POLR1B-209ENST00000448770 POLA2Q14181 598 aa16.56■□□□□ 0.24
POLR1B-209ENST00000448770 MPNDQ8N594 471 aa16.56■□□□□ 0.24
POLR1B-209ENST00000448770 SNX14Q9Y5W7 946 aa16.56■□□□□ 0.24
POLR1B-209ENST00000448770 PLEKHG5O94827 1062 aa16.56■□□□□ 0.24
POLR1B-209ENST00000448770 TTC14Q96N46 770 aa16.56■□□□□ 0.24
POLR1B-209ENST00000448770 HTATSF1O43719 755 aaKnown RBP16.55■□□□□ 0.24
POLR1B-209ENST00000448770 SURF6O75683 361 aaKnown RBP16.55■□□□□ 0.24
POLR1B-209ENST00000448770 LARGE1O95461 756 aa16.55■□□□□ 0.24
POLR1B-209ENST00000448770 NLRP6P59044 892 aa16.55■□□□□ 0.24
POLR1B-209ENST00000448770 AOX1Q06278 1338 aa16.55■□□□□ 0.24
POLR1B-209ENST00000448770 RHPN1Q8TCX5 695 aa16.55■□□□□ 0.24
POLR1B-209ENST00000448770 RAD50Q92878 1312 aa16.55■□□□□ 0.24
POLR1B-209ENST00000448770 LSG1Q9H089 658 aaKnown RBP16.55■□□□□ 0.24
POLR1B-209ENST00000448770 TSPY26PQ9H489 355 aa16.55■□□□□ 0.24
POLR1B-209ENST00000448770 SGSM2O43147 1006 aa16.55■□□□□ 0.24
POLR1B-209ENST00000448770 TPRNQ4KMQ1 711 aa16.55■□□□□ 0.24
POLR1B-209ENST00000448770 HDGFL1Q5TGJ6 251 aa16.55■□□□□ 0.24
POLR1B-209ENST00000448770 CNPY2Q9Y2B0 182 aa16.55■□□□□ 0.24
POLR1B-209ENST00000448770 ANXA1P04083 346 aa16.54■□□□□ 0.24
POLR1B-209ENST00000448770 TAF7Q15545 349 aaPredicted RBP16.54■□□□□ 0.24
POLR1B-209ENST00000448770 RUFY3Q7L099 469 aa16.54■□□□□ 0.24
POLR1B-209ENST00000448770 CRYBG1Q9Y4K1 1723 aa16.54■□□□□ 0.24
POLR1B-209ENST00000448770 KCNQ3O43525 872 aa16.54■□□□□ 0.24
POLR1B-209ENST00000448770 AK2P54819 239 aa16.53■□□□□ 0.24
POLR1B-209ENST00000448770 VSIG10Q8N0Z9 540 aa16.53■□□□□ 0.24
POLR1B-209ENST00000448770 CACNA1FO60840 1977 aa16.53■□□□□ 0.24
POLR1B-209ENST00000448770 COL9A3Q14050 684 aaPredicted RBP16.53■□□□□ 0.24
POLR1B-209ENST00000448770 SPG7Q9UQ90 795 aa16.53■□□□□ 0.24
POLR1B-209ENST00000448770 SRGAP3O43295 1099 aa16.52■□□□□ 0.24
POLR1B-209ENST00000448770 EIF2S2P20042 333 aaKnown RBP16.52■□□□□ 0.24
POLR1B-209ENST00000448770 LGR6Q9HBX8 967 aa16.52■□□□□ 0.23
POLR1B-209ENST00000448770 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.52■□□□□ 0.23
POLR1B-209ENST00000448770 WDR33Q9C0J8 1336 aaKnown RBP16.51■□□□□ 0.23
POLR1B-209ENST00000448770 CHPF2Q9P2E5 772 aa16.51■□□□□ 0.23
POLR1B-209ENST00000448770 CCDC39Q9UFE4 941 aa16.51■□□□□ 0.23
POLR1B-209ENST00000448770 ST3GAL1Q11201 340 aa16.51■□□□□ 0.23
POLR1B-209ENST00000448770 CWC27Q6UX04 472 aaKnown RBP16.51■□□□□ 0.23
POLR1B-209ENST00000448770 FER1L4A9Z1Z3 1794 aa16.5■□□□□ 0.23
POLR1B-209ENST00000448770 MED1Q15648 1581 aaPredicted RBP16.5■□□□□ 0.23
POLR1B-209ENST00000448770 UQCRHLA0A096LP55 91 aa16.5■□□□□ 0.23
POLR1B-209ENST00000448770 ZBTB7CA1YPR0 619 aa16.5■□□□□ 0.23
POLR1B-209ENST00000448770 UQCRHP07919 91 aa16.5■□□□□ 0.23
POLR1B-209ENST00000448770 TERF1P54274 439 aa16.5■□□□□ 0.23
POLR1B-209ENST00000448770 BEND3Q5T5X7 828 aa16.5■□□□□ 0.23
POLR1B-209ENST00000448770 TMEM87AQ8NBN3 555 aa16.5■□□□□ 0.23
POLR1B-209ENST00000448770 ZNF830Q96NB3 372 aaPredicted RBP16.5■□□□□ 0.23
POLR1B-209ENST00000448770 SYT1P21579 422 aa16.5■□□□□ 0.23
POLR1B-209ENST00000448770 PTH1RQ03431 593 aa16.5■□□□□ 0.23
POLR1B-209ENST00000448770 ADCK5Q3MIX3 580 aa16.5■□□□□ 0.23
POLR1B-209ENST00000448770 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.5■□□□□ 0.23
POLR1B-209ENST00000448770 CEMIPQ8WUJ3 1361 aa16.49■□□□□ 0.23
POLR1B-209ENST00000448770 PI4KAP2A4QPH2 592 aa16.49■□□□□ 0.23
POLR1B-209ENST00000448770 EIF4A1P60842 406 aaKnown RBP16.49■□□□□ 0.23
POLR1B-209ENST00000448770 PI4KAP1Q8N8J0 262 aa16.49■□□□□ 0.23
POLR1B-209ENST00000448770 DDX54Q8TDD1 881 aaKnown RBP16.49■□□□□ 0.23
POLR1B-209ENST00000448770 JARID2Q92833 1246 aaPredicted RBP16.49■□□□□ 0.23
POLR1B-209ENST00000448770 USP25Q9UHP3 1055 aa16.49■□□□□ 0.23
POLR1B-209ENST00000448770 ADCY9O60503 1353 aa16.49■□□□□ 0.23
POLR1B-209ENST00000448770 RAB11FIP3O75154 756 aa16.48■□□□□ 0.23
POLR1B-209ENST00000448770 ZSCAN22P10073 491 aaPredicted RBP16.48■□□□□ 0.23
POLR1B-209ENST00000448770 PDCL3Q9H2J4 239 aa16.48■□□□□ 0.23
POLR1B-209ENST00000448770 KIF1BPQ96EK5 621 aa16.48■□□□□ 0.23
POLR1B-209ENST00000448770 PLPPR3Q6T4P5 718 aa16.47■□□□□ 0.23
POLR1B-209ENST00000448770 C17orf53Q8N3J3 647 aaPredicted RBP16.47■□□□□ 0.23
POLR1B-209ENST00000448770 KDM3BQ7LBC6 1761 aa16.47■□□□□ 0.23
POLR1B-209ENST00000448770 EPB41L2O43491 1005 aaKnown RBP16.47■□□□□ 0.23
POLR1B-209ENST00000448770 HCLS1P14317 486 aaPredicted RBP16.47■□□□□ 0.23
POLR1B-209ENST00000448770 MCM5P33992 734 aa16.47■□□□□ 0.23
POLR1B-209ENST00000448770 ZMYND15Q9H091 742 aa16.47■□□□□ 0.23
POLR1B-209ENST00000448770 FAM13BQ9NYF5 915 aa16.47■□□□□ 0.23
POLR1B-209ENST00000448770 STX6O43752 255 aa16.46■□□□□ 0.23
POLR1B-209ENST00000448770 ARHGAP23Q9P227 1491 aa16.46■□□□□ 0.23
POLR1B-209ENST00000448770 USP54Q70EL1 1684 aa16.46■□□□□ 0.23
POLR1B-209ENST00000448770 AP5Z1O43299 807 aa16.46■□□□□ 0.23
POLR1B-209ENST00000448770 FIBPO43427 364 aa16.46■□□□□ 0.23
POLR1B-209ENST00000448770 CASTP20810 708 aaKnown RBP16.46■□□□□ 0.23
POLR1B-209ENST00000448770 NBPF6Q5VWK0 638 aa16.46■□□□□ 0.23
POLR1B-209ENST00000448770 DNAAF4Q8WXU2 420 aa16.46■□□□□ 0.23
POLR1B-209ENST00000448770 SYAP1Q96A49 352 aaPredicted RBP16.46■□□□□ 0.23
POLR1B-209ENST00000448770 NBPF4Q96M43 638 aa16.46■□□□□ 0.23
POLR1B-209ENST00000448770 HYPKQ9NX55 129 aa16.46■□□□□ 0.23
POLR1B-209ENST00000448770 PA2G4Q9UQ80 394 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms