RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 BEND3Q5T5X7 828 aa22.11■■□□□ 1.13
LMNA-208ENST00000448611 SRCIN1Q9C0H9 1055 aa22.11■■□□□ 1.13
LMNA-208ENST00000448611 COL14A1Q05707 1796 aaKnown RBP22.1■■□□□ 1.13
LMNA-208ENST00000448611 HMMRO75330 724 aa22.1■■□□□ 1.13
LMNA-208ENST00000448611 PDIA6Q15084 440 aa22.1■■□□□ 1.13
LMNA-208ENST00000448611 HYPKQ9NX55 129 aa22.1■■□□□ 1.13
LMNA-208ENST00000448611 BTG4Q9NY30 223 aa22.1■■□□□ 1.13
LMNA-208ENST00000448611 DDX21Q9NR30 783 aaKnown RBP eCLIP22.1■■□□□ 1.13
LMNA-208ENST00000448611 TTC5Q8N0Z6 440 aa22.09■■□□□ 1.13
LMNA-208ENST00000448611 NOP58Q9Y2X3 529 aaKnown RBP22.09■■□□□ 1.13
LMNA-208ENST00000448611 GLI3P10071 1580 aa22.07■■□□□ 1.12
LMNA-208ENST00000448611 LRP6O75581 1613 aa22.07■■□□□ 1.12
LMNA-208ENST00000448611 ERVV-2B6SEH9 535 aa22.07■■□□□ 1.12
LMNA-208ENST00000448611 ATP8B2P98198 1209 aa22.07■■□□□ 1.12
LMNA-208ENST00000448611 KSR2Q6VAB6 950 aa22.07■■□□□ 1.12
LMNA-208ENST00000448611 LRRFIP2Q9Y608 721 aaKnown RBP22.07■■□□□ 1.12
LMNA-208ENST00000448611 SNRPA1P09661 255 aaKnown RBP22.06■■□□□ 1.12
LMNA-208ENST00000448611 UBTFL1P0CB47 393 aaPredicted RBP22.06■■□□□ 1.12
LMNA-208ENST00000448611 BMP2KLQ5H9B9 411 aa22.06■■□□□ 1.12
LMNA-208ENST00000448611 FMNL2Q96PY5 1086 aa22.06■■□□□ 1.12
LMNA-208ENST00000448611 MEX3CQ5U5Q3 659 aaKnown RBP22.06■■□□□ 1.12
LMNA-208ENST00000448611 C8orf37Q96NL8 207 aa22.06■■□□□ 1.12
LMNA-208ENST00000448611 ZBTB47Q9UFB7 747 aaPredicted RBP22.06■■□□□ 1.12
LMNA-208ENST00000448611 DDRGK1Q96HY6 314 aa22.05■■□□□ 1.12
LMNA-208ENST00000448611 MAP3K2Q9Y2U5 619 aa22.05■■□□□ 1.12
LMNA-208ENST00000448611 DDX54Q8TDD1 881 aaKnown RBP22.04■■□□□ 1.12
LMNA-208ENST00000448611 USP35Q9P2H5 1018 aa22.04■■□□□ 1.12
LMNA-208ENST00000448611 PNMA6EA0A0J9YXQ4 647 aa22.04■■□□□ 1.12
LMNA-208ENST00000448611 PLEKHM2Q8IWE5 1019 aa22.04■■□□□ 1.12
LMNA-208ENST00000448611 USP16Q9Y5T5 823 aa22.04■■□□□ 1.12
LMNA-208ENST00000448611 NGLY1Q96IV0 654 aa22.03■■□□□ 1.12
LMNA-208ENST00000448611 ALDH1L1O75891 902 aa22.02■■□□□ 1.12
LMNA-208ENST00000448611 NBPF7P0C2Y1 421 aaPredicted RBP22.02■■□□□ 1.12
LMNA-208ENST00000448611 DISP2A7MBM2 1401 aa22.02■■□□□ 1.12
LMNA-208ENST00000448611 DDX58O95786 925 aaKnown RBP22.02■■□□□ 1.11
LMNA-208ENST00000448611 LRP10Q7Z4F1 713 aa22.02■■□□□ 1.11
LMNA-208ENST00000448611 PAPPAQ13219 1627 aa22.01■■□□□ 1.11
LMNA-208ENST00000448611 C16orf71Q8IYS4 520 aaPredicted RBP22.01■■□□□ 1.11
LMNA-208ENST00000448611 UBR2Q8IWV8 1755 aa22.01■■□□□ 1.11
LMNA-208ENST00000448611 LAMB4A4D0S4 1761 aa22■■□□□ 1.11
LMNA-208ENST00000448611 SMARCA5O60264 1052 aaPredicted RBP22■■□□□ 1.11
LMNA-208ENST00000448611 ERICH6Q7L0X2 663 aa22■■□□□ 1.11
LMNA-208ENST00000448611 ILDR1Q86SU0 546 aaPredicted RBP22■■□□□ 1.11
LMNA-208ENST00000448611 SSH3Q8TE77 659 aa22■■□□□ 1.11
LMNA-208ENST00000448611 TOGARAM1Q9Y4F4 1720 aa22■■□□□ 1.11
LMNA-208ENST00000448611 KCPQ6ZWJ8 1503 aa22■■□□□ 1.11
LMNA-208ENST00000448611 APBB1O00213 710 aa21.99■■□□□ 1.11
LMNA-208ENST00000448611 MYL6BP14649 208 aa21.99■■□□□ 1.11
LMNA-208ENST00000448611 AIMP1Q12904 312 aaKnown RBP21.99■■□□□ 1.11
LMNA-208ENST00000448611 TBC1D32Q96NH3 1257 aa21.99■■□□□ 1.11
LMNA-208ENST00000448611 UPF2Q9HAU5 1272 aaKnown RBP21.99■■□□□ 1.11
LMNA-208ENST00000448611 EXOC6BQ9Y2D4 811 aa21.99■■□□□ 1.11
LMNA-208ENST00000448611 PLCH1Q4KWH8 1693 aa21.99■■□□□ 1.11
LMNA-208ENST00000448611 LINS1Q8NG48 757 aa21.98■■□□□ 1.11
LMNA-208ENST00000448611 OTUD7AQ8TE49 926 aaPredicted RBP21.98■■□□□ 1.11
LMNA-208ENST00000448611 XAGE3Q8WTP9 111 aa21.98■■□□□ 1.11
LMNA-208ENST00000448611 TNS2Q63HR2 1409 aa21.98■■□□□ 1.11
LMNA-208ENST00000448611 IBTKQ9P2D0 1353 aaPredicted RBP21.97■■□□□ 1.11
LMNA-208ENST00000448611 GSPT1P15170 499 aaKnown RBP21.97■■□□□ 1.11
LMNA-208ENST00000448611 POLA2Q14181 598 aa21.97■■□□□ 1.11
LMNA-208ENST00000448611 COPS6Q7L5N1 327 aa21.97■■□□□ 1.11
LMNA-208ENST00000448611 CWF19L2Q2TBE0 894 aaKnown RBP21.96■■□□□ 1.11
LMNA-208ENST00000448611 TTC22Q5TAA0 569 aa21.96■■□□□ 1.11
LMNA-208ENST00000448611 PPP1R42Q7Z4L9 355 aa21.96■■□□□ 1.11
LMNA-208ENST00000448611 RIC3Q7Z5B4 369 aa21.95■■□□□ 1.1
LMNA-208ENST00000448611 SLIT2O94813 1529 aa21.95■■□□□ 1.1
LMNA-208ENST00000448611 UTYO14607 1347 aa21.94■■□□□ 1.1
LMNA-208ENST00000448611 ERBB4Q15303 1308 aa21.94■■□□□ 1.1
LMNA-208ENST00000448611 LRRCC1Q9C099 1032 aa21.94■■□□□ 1.1
LMNA-208ENST00000448611 IGKV5-2P06315 115 aa21.94■■□□□ 1.1
LMNA-208ENST00000448611 FNBP4Q8N3X1 1017 aaPredicted RBP21.94■■□□□ 1.1
LMNA-208ENST00000448611 ANP32EQ9BTT0 268 aa21.94■■□□□ 1.1
LMNA-208ENST00000448611 C9orf78Q9NZ63 289 aaPredicted RBP21.94■■□□□ 1.1
LMNA-208ENST00000448611 PIP4K2AP48426 406 aaPredicted RBP21.93■■□□□ 1.1
LMNA-208ENST00000448611 MFAP1P55081 439 aaKnown RBP21.93■■□□□ 1.1
LMNA-208ENST00000448611 MTX1Q13505 466 aa21.93■■□□□ 1.1
LMNA-208ENST00000448611 USP21Q9UK80 565 aa21.93■■□□□ 1.1
LMNA-208ENST00000448611 WNK3Q9BYP7 1800 aa21.92■■□□□ 1.1
LMNA-208ENST00000448611 SRGAP3O43295 1099 aa21.92■■□□□ 1.1
LMNA-208ENST00000448611 ANKRD13DQ6ZTN6 518 aa21.92■■□□□ 1.1
LMNA-208ENST00000448611 METTL22Q9BUU2 404 aaPredicted RBP21.92■■□□□ 1.1
LMNA-208ENST00000448611 BCL11AQ9H165 835 aa21.92■■□□□ 1.1
LMNA-208ENST00000448611 TMOD3Q9NYL9 352 aa21.92■■□□□ 1.1
LMNA-208ENST00000448611 NRAPQ86VF7 1730 aa21.92■■□□□ 1.1
LMNA-208ENST00000448611 NWD2Q9ULI1 1742 aa21.92■■□□□ 1.1
LMNA-208ENST00000448611 AFF2P51816 1311 aa21.92■■□□□ 1.1
LMNA-208ENST00000448611 SALL3Q9BXA9 1300 aa21.92■■□□□ 1.1
LMNA-208ENST00000448611 GRM8O00222 908 aa21.92■■□□□ 1.1
LMNA-208ENST00000448611 UNC5CLQ8IV45 518 aa21.92■■□□□ 1.1
LMNA-208ENST00000448611 OSBPL3Q9H4L5 887 aa21.92■■□□□ 1.1
LMNA-208ENST00000448611 HDAC5Q9UQL6 1122 aa21.92■■□□□ 1.1
LMNA-208ENST00000448611 BCL9LQ86UU0 1499 aa21.91■■□□□ 1.1
LMNA-208ENST00000448611 NBPF26B4DH59 902 aa21.91■■□□□ 1.1
LMNA-208ENST00000448611 NBPF14Q5TI25 921 aa21.91■■□□□ 1.1
LMNA-208ENST00000448611 NBPF10Q6P3W6 841 aaKnown RBP21.91■■□□□ 1.1
LMNA-208ENST00000448611 NBPF15Q8N660 670 aa21.91■■□□□ 1.1
LMNA-208ENST00000448611 NEXNQ0ZGT2 675 aa21.9■■□□□ 1.1
LMNA-208ENST00000448611 TBC1D9Q6ZT07 1266 aa21.9■■□□□ 1.1
LMNA-208ENST00000448611 NEURL1BA8MQ27 555 aa21.9■■□□□ 1.1
LMNA-208ENST00000448611 PTCD1O75127 700 aaKnown RBP21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms