RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 JAKMIP1Q96N16 626 aaKnown RBP13.15□□□□□ -0.3
FN1-211ENST00000443816 TNMDQ9H2S6 317 aa13.15□□□□□ -0.3
FN1-211ENST00000443816 ZNF608Q9ULD9 1512 aaPredicted RBP13.15□□□□□ -0.3
FN1-211ENST00000443816 TTC21AQ8NDW8 1320 aa13.15□□□□□ -0.3
FN1-211ENST00000443816 FIBPO43427 364 aa13.15□□□□□ -0.3
FN1-211ENST00000443816 SETDB2Q96T68 719 aa13.15□□□□□ -0.3
FN1-211ENST00000443816 GSTO1P78417 241 aa13.15□□□□□ -0.31
FN1-211ENST00000443816 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.14□□□□□ -0.31
FN1-211ENST00000443816 CCDC152Q4G0S7 254 aa13.14□□□□□ -0.31
FN1-211ENST00000443816 C8orf37Q96NL8 207 aa13.14□□□□□ -0.31
FN1-211ENST00000443816 MYCNP04198 464 aaPredicted RBP13.14□□□□□ -0.31
FN1-211ENST00000443816 NEFHP12036 1026 aa13.14□□□□□ -0.31
FN1-211ENST00000443816 PHAXQ9H814 394 aaKnown RBP13.14□□□□□ -0.31
FN1-211ENST00000443816 NKTRP30414 1462 aaKnown RBP13.14□□□□□ -0.31
FN1-211ENST00000443816 PPP4R3BQ5MIZ7 849 aa13.14□□□□□ -0.31
FN1-211ENST00000443816 ZNF397Q8NF99 534 aaPredicted RBP13.14□□□□□ -0.31
FN1-211ENST00000443816 PIBF1Q8WXW3 757 aa13.14□□□□□ -0.31
FN1-211ENST00000443816 NOM1Q5C9Z4 860 aaKnown RBP13.13□□□□□ -0.31
FN1-211ENST00000443816 NBPF6Q5VWK0 638 aa13.13□□□□□ -0.31
FN1-211ENST00000443816 CATIPQ7Z7H3 387 aa13.13□□□□□ -0.31
FN1-211ENST00000443816 NBPF5PQ86XG9 351 aaPredicted RBP13.13□□□□□ -0.31
FN1-211ENST00000443816 ANKRD24Q8TF21 1146 aa13.13□□□□□ -0.31
FN1-211ENST00000443816 NBPF4Q96M43 638 aa13.13□□□□□ -0.31
FN1-211ENST00000443816 CFAP43Q8NDM7 1665 aa13.13□□□□□ -0.31
FN1-211ENST00000443816 IBSPP21815 317 aaPredicted RBP13.13□□□□□ -0.31
FN1-211ENST00000443816 CHMP4BP1P59074 171 aa13.13□□□□□ -0.31
FN1-211ENST00000443816 NBPF8Q3BBV2 869 aa13.13□□□□□ -0.31
FN1-211ENST00000443816 NBPF14Q5TI25 921 aa13.13□□□□□ -0.31
FN1-211ENST00000443816 NME9Q86XW9 330 aa13.13□□□□□ -0.31
FN1-211ENST00000443816 NYXQ9GZU5 481 aa13.13□□□□□ -0.31
FN1-211ENST00000443816 SYCP2Q9BX26 1530 aa13.13□□□□□ -0.31
FN1-211ENST00000443816 POLD1P28340 1107 aa13.13□□□□□ -0.31
FN1-211ENST00000443816 TMEM266Q2M3C6 531 aa13.13□□□□□ -0.31
FN1-211ENST00000443816 DRC1Q96MC2 740 aa13.13□□□□□ -0.31
FN1-211ENST00000443816 CABP5Q9NP86 173 aa13.13□□□□□ -0.31
FN1-211ENST00000443816 ZNF213O14771 459 aa13.13□□□□□ -0.31
FN1-211ENST00000443816 FGFR1OPO95684 399 aaKnown RBP13.13□□□□□ -0.31
FN1-211ENST00000443816 HDAC9Q9UKV0 1011 aa13.13□□□□□ -0.31
FN1-211ENST00000443816 SEPT11Q9NVA2 429 aaKnown RBP13.12□□□□□ -0.31
FN1-211ENST00000443816 CASTP20810 708 aaKnown RBP13.12□□□□□ -0.31
FN1-211ENST00000443816 CCDC12Q8WUD4 166 aaPredicted RBP13.12□□□□□ -0.31
FN1-211ENST00000443816 ZNF219Q9P2Y4 722 aaPredicted RBP13.12□□□□□ -0.31
FN1-211ENST00000443816 PDE4BQ07343 736 aa13.12□□□□□ -0.31
FN1-211ENST00000443816 CAVIN1Q6NZI2 390 aaKnown RBP13.12□□□□□ -0.31
FN1-211ENST00000443816 IL1RAPL2Q9NP60 686 aa13.12□□□□□ -0.31
FN1-211ENST00000443816 SNRPA1P09661 255 aaKnown RBP13.12□□□□□ -0.31
FN1-211ENST00000443816 OGFOD1Q8N543 542 aa13.12□□□□□ -0.31
FN1-211ENST00000443816 ZCRB1Q8TBF4 217 aaKnown RBP13.12□□□□□ -0.31
FN1-211ENST00000443816 DNAAF4Q8WXU2 420 aa13.12□□□□□ -0.31
FN1-211ENST00000443816 RANBP6O60518 1105 aaKnown RBP13.12□□□□□ -0.31
FN1-211ENST00000443816 KIF5BP33176 963 aa13.11□□□□□ -0.31
FN1-211ENST00000443816 GPTP24298 496 aa13.11□□□□□ -0.31
FN1-211ENST00000443816 GOLGA6L10A6NI86 522 aa13.11□□□□□ -0.31
FN1-211ENST00000443816 K7ELQ4 463 aaPredicted RBP13.11□□□□□ -0.31
FN1-211ENST00000443816 BAG4O95429 457 aaKnown RBP13.11□□□□□ -0.31
FN1-211ENST00000443816 CCDC181Q5TID7 509 aa13.11□□□□□ -0.31
FN1-211ENST00000443816 CETN2P41208 172 aa13.11□□□□□ -0.31
FN1-211ENST00000443816 TSG101Q99816 390 aa13.11□□□□□ -0.31
FN1-211ENST00000443816 LMTK3Q96Q04 1460 aa13.11□□□□□ -0.31
FN1-211ENST00000443816 KIAA0556O60303 1618 aa13.11□□□□□ -0.31
FN1-211ENST00000443816 ATP6V1AP38606 617 aa13.11□□□□□ -0.31
FN1-211ENST00000443816 SPATA32Q96LK8 384 aa13.1□□□□□ -0.31
FN1-211ENST00000443816 SLC12A7Q9Y666 1083 aa13.1□□□□□ -0.31
FN1-211ENST00000443816 GBP2P32456 591 aaPredicted RBP13.1□□□□□ -0.31
FN1-211ENST00000443816 IQCEQ6IPM2 695 aa13.1□□□□□ -0.31
FN1-211ENST00000443816 BOLA2Q9H3K6 86 aa13.1□□□□□ -0.31
FN1-211ENST00000443816 MAP3K2Q9Y2U5 619 aa13.1□□□□□ -0.31
FN1-211ENST00000443816 PRPF40AO75400 957 aaKnown RBP13.1□□□□□ -0.31
FN1-211ENST00000443816 TMEM57Q8N5G2 664 aa13.1□□□□□ -0.31
FN1-211ENST00000443816 ACEP12821 1306 aa13.1□□□□□ -0.31
FN1-211ENST00000443816 SMTNL1A8MU46 457 aa13.1□□□□□ -0.31
FN1-211ENST00000443816 NF2P35240 595 aa13.09□□□□□ -0.31
FN1-211ENST00000443816 TRAF1Q13077 416 aa13.09□□□□□ -0.31
FN1-211ENST00000443816 ADAMTS12P58397 1594 aa13.09□□□□□ -0.31
FN1-211ENST00000443816 FANCIQ9NVI1 1328 aa13.09□□□□□ -0.31
FN1-211ENST00000443816 DDB1Q16531 1140 aa13.09□□□□□ -0.31
FN1-211ENST00000443816 LDHAL6AQ6ZMR3 332 aa13.09□□□□□ -0.31
FN1-211ENST00000443816 PIK3R4Q99570 1358 aa13.09□□□□□ -0.31
FN1-211ENST00000443816 RIMS2Q9UQ26 1411 aa13.09□□□□□ -0.31
FN1-211ENST00000443816 SSRP1Q08945 709 aaKnown RBP13.08□□□□□ -0.31
FN1-211ENST00000443816 EXOC6BQ9Y2D4 811 aa13.08□□□□□ -0.31
FN1-211ENST00000443816 MX1P20591 662 aa13.08□□□□□ -0.32
FN1-211ENST00000443816 ZNF771Q7L3S4 317 aaPredicted RBP13.08□□□□□ -0.32
FN1-211ENST00000443816 JAKMIP3Q5VZ66 844 aa13.08□□□□□ -0.32
FN1-211ENST00000443816 RSPH6AQ9H0K4 717 aa13.08□□□□□ -0.32
FN1-211ENST00000443816 PLCH2O75038 1416 aa13.08□□□□□ -0.32
FN1-211ENST00000443816 NUTM1Q86Y26 1132 aa13.08□□□□□ -0.32
FN1-211ENST00000443816 DNAJC5BQ9UF47 199 aa13.08□□□□□ -0.32
FN1-211ENST00000443816 ABCC10Q5T3U5 1492 aa13.08□□□□□ -0.32
FN1-211ENST00000443816 HSP90AA2PQ14568 343 aaPredicted RBP13.07□□□□□ -0.32
FN1-211ENST00000443816 PPIP5K1Q6PFW1 1433 aa13.07□□□□□ -0.32
FN1-211ENST00000443816 ANKRD36BQ8N2N9 1353 aa13.07□□□□□ -0.32
FN1-211ENST00000443816 TRAK2O60296 914 aa13.07□□□□□ -0.32
FN1-211ENST00000443816 CRNKL1Q9BZJ0 848 aaKnown RBP13.07□□□□□ -0.32
FN1-211ENST00000443816 CLEC11AQ9Y240 323 aa13.07□□□□□ -0.32
FN1-211ENST00000443816 ADGRF5Q8IZF2 1346 aa13.07□□□□□ -0.32
FN1-211ENST00000443816 KIF20AO95235 890 aa13.07□□□□□ -0.32
FN1-211ENST00000443816 MRE11P49959 708 aa13.07□□□□□ -0.32
FN1-211ENST00000443816 C14orf93Q9H972 538 aaKnown RBP13.07□□□□□ -0.32
FN1-211ENST00000443816 ABCC1P33527 1531 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms