RNA–Protein interactions for RNA: ENST00000441366.6

EPB42-202, Transcript of erythrocyte membrane protein band 4.2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPB42, Length 2,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-202ENST00000441366 PNMA6EA0A0J9YXQ4 647 aa16.55■□□□□ 0.24
EPB42-202ENST00000441366 GNAI3P08754 354 aa16.55■□□□□ 0.24
EPB42-202ENST00000441366 MAP3K2Q9Y2U5 619 aa16.55■□□□□ 0.24
EPB42-202ENST00000441366 USP16Q9Y5T5 823 aa16.55■□□□□ 0.24
EPB42-202ENST00000441366 PKD1L3Q7Z443 1732 aa16.54■□□□□ 0.24
EPB42-202ENST00000441366 UBTFL1P0CB47 393 aaPredicted RBP16.54■□□□□ 0.24
EPB42-202ENST00000441366 OTUD7AQ8TE49 926 aaPredicted RBP16.54■□□□□ 0.24
EPB42-202ENST00000441366 EXOC6BQ9Y2D4 811 aa16.54■□□□□ 0.24
EPB42-202ENST00000441366 ADCY9O60503 1353 aa16.54■□□□□ 0.24
EPB42-202ENST00000441366 HSP90AB1P08238 724 aaKnown RBP16.53■□□□□ 0.24
EPB42-202ENST00000441366 NBPF7P0C2Y1 421 aaPredicted RBP16.53■□□□□ 0.24
EPB42-202ENST00000441366 PIP4K2BP78356 416 aa16.53■□□□□ 0.24
EPB42-202ENST00000441366 PCDH11XQ9BZA7 1347 aa16.53■□□□□ 0.24
EPB42-202ENST00000441366 PCDH11YQ9BZA8 1340 aa16.53■□□□□ 0.24
EPB42-202ENST00000441366 BEND3Q5T5X7 828 aa16.53■□□□□ 0.24
EPB42-202ENST00000441366 CHMP4AQ9BY43 222 aa16.53■□□□□ 0.24
EPB42-202ENST00000441366 PDIA6Q15084 440 aa16.52■□□□□ 0.24
EPB42-202ENST00000441366 HMMRO75330 724 aa16.52■□□□□ 0.23
EPB42-202ENST00000441366 MFAP1P55081 439 aaKnown RBP16.52■□□□□ 0.23
EPB42-202ENST00000441366 ADAMTS2O95450 1211 aa16.51■□□□□ 0.23
EPB42-202ENST00000441366 CWF19L2Q2TBE0 894 aaKnown RBP16.51■□□□□ 0.23
EPB42-202ENST00000441366 DDX21Q9NR30 783 aaKnown RBP eCLIP16.51■□□□□ 0.23
EPB42-202ENST00000441366 C5P01031 1676 aa16.51■□□□□ 0.23
EPB42-202ENST00000441366 PLEKHM2Q8IWE5 1019 aa16.51■□□□□ 0.23
EPB42-202ENST00000441366 HYPKQ9NX55 129 aa16.51■□□□□ 0.23
EPB42-202ENST00000441366 KAT6BQ8WYB5 2073 aa16.5■□□□□ 0.23
EPB42-202ENST00000441366 PARP4Q9UKK3 1724 aaKnown RBP16.5■□□□□ 0.23
EPB42-202ENST00000441366 ATP8B2P98198 1209 aa16.5■□□□□ 0.23
EPB42-202ENST00000441366 KSR2Q6VAB6 950 aa16.5■□□□□ 0.23
EPB42-202ENST00000441366 DAXXQ9UER7 740 aaPredicted RBP16.5■□□□□ 0.23
EPB42-202ENST00000441366 LTBP4Q8N2S1 1624 aa16.5■□□□□ 0.23
EPB42-202ENST00000441366 SNRPA1P09661 255 aaKnown RBP16.5■□□□□ 0.23
EPB42-202ENST00000441366 FMNL2Q96PY5 1086 aa16.5■□□□□ 0.23
EPB42-202ENST00000441366 PXDNLA1KZ92 1463 aa16.49■□□□□ 0.23
EPB42-202ENST00000441366 PTCD1O75127 700 aaKnown RBP16.49■□□□□ 0.23
EPB42-202ENST00000441366 UPF2Q9HAU5 1272 aaKnown RBP16.49■□□□□ 0.23
EPB42-202ENST00000441366 NUTM2BA6NNL0 878 aaPredicted RBP16.48■□□□□ 0.23
EPB42-202ENST00000441366 NUTM2EB1AL46 878 aaPredicted RBP16.48■□□□□ 0.23
EPB42-202ENST00000441366 FRAT2O75474 233 aaPredicted RBP16.48■□□□□ 0.23
EPB42-202ENST00000441366 BMP2KLQ5H9B9 411 aa16.48■□□□□ 0.23
EPB42-202ENST00000441366 COPS6Q7L5N1 327 aa16.48■□□□□ 0.23
EPB42-202ENST00000441366 RIC3Q7Z5B4 369 aa16.48■□□□□ 0.23
EPB42-202ENST00000441366 NUTM2AQ8IVF1 878 aaPredicted RBP16.48■□□□□ 0.23
EPB42-202ENST00000441366 XAGE3Q8WTP9 111 aa16.48■□□□□ 0.23
EPB42-202ENST00000441366 GSPT1P15170 499 aaKnown RBP16.48■□□□□ 0.23
EPB42-202ENST00000441366 PPP1R42Q7Z4L9 355 aa16.48■□□□□ 0.23
EPB42-202ENST00000441366 FAM43AQ8N2R8 423 aa16.48■□□□□ 0.23
EPB42-202ENST00000441366 C9orf78Q9NZ63 289 aaPredicted RBP16.47■□□□□ 0.23
EPB42-202ENST00000441366 MRC1P22897 1456 aa16.47■□□□□ 0.23
EPB42-202ENST00000441366 N4BP2Q86UW6 1770 aaPredicted RBP16.46■□□□□ 0.23
EPB42-202ENST00000441366 TSHZ3Q63HK5 1081 aa16.46■□□□□ 0.23
EPB42-202ENST00000441366 SRGAP3O43295 1099 aa16.45■□□□□ 0.22
EPB42-202ENST00000441366 DDX58O95786 925 aaKnown RBP16.45■□□□□ 0.22
EPB42-202ENST00000441366 ERVV-2B6SEH9 535 aa16.45■□□□□ 0.22
EPB42-202ENST00000441366 TBC1D32Q96NH3 1257 aa16.45■□□□□ 0.22
EPB42-202ENST00000441366 SHANK3Q9BYB0 1731 aa16.45■□□□□ 0.22
EPB42-202ENST00000441366 NKX1-1Q15270 411 aaPredicted RBP16.44■□□□□ 0.22
EPB42-202ENST00000441366 PLEKHG2Q9H7P9 1386 aa16.44■□□□□ 0.22
EPB42-202ENST00000441366 JARID2Q92833 1246 aaPredicted RBP16.44■□□□□ 0.22
EPB42-202ENST00000441366 IL1RAPL2Q9NP60 686 aa16.44■□□□□ 0.22
EPB42-202ENST00000441366 SURF6O75683 361 aaKnown RBP16.43■□□□□ 0.22
EPB42-202ENST00000441366 TTC22Q5TAA0 569 aa16.43■□□□□ 0.22
EPB42-202ENST00000441366 MYD88Q99836 296 aa16.43■□□□□ 0.22
EPB42-202ENST00000441366 LRRCC1Q9C099 1032 aa16.43■□□□□ 0.22
EPB42-202ENST00000441366 AHDC1Q5TGY3 1603 aaPredicted RBP16.43■□□□□ 0.22
EPB42-202ENST00000441366 IGKV5-2P06315 115 aa16.43■□□□□ 0.22
EPB42-202ENST00000441366 TBC1D9Q6ZT07 1266 aa16.43■□□□□ 0.22
EPB42-202ENST00000441366 C22orf23Q9BZE7 217 aa16.43■□□□□ 0.22
EPB42-202ENST00000441366 A1BGP04217 495 aa16.42■□□□□ 0.22
EPB42-202ENST00000441366 ANKRD13DQ6ZTN6 518 aa16.42■□□□□ 0.22
EPB42-202ENST00000441366 LRP10Q7Z4F1 713 aa16.42■□□□□ 0.22
EPB42-202ENST00000441366 LINS1Q8NG48 757 aa16.42■□□□□ 0.22
EPB42-202ENST00000441366 SSH3Q8TE77 659 aa16.42■□□□□ 0.22
EPB42-202ENST00000441366 COL16A1Q07092 1604 aaPredicted RBP16.42■□□□□ 0.22
EPB42-202ENST00000441366 ALDH1L1O75891 902 aa16.42■□□□□ 0.22
EPB42-202ENST00000441366 TMOD3Q9NYL9 352 aa16.42■□□□□ 0.22
EPB42-202ENST00000441366 PHLPP1O60346 1717 aa16.42■□□□□ 0.22
EPB42-202ENST00000441366 ASAP1Q9ULH1 1129 aa16.41■□□□□ 0.22
EPB42-202ENST00000441366 COL14A1Q05707 1796 aaKnown RBP16.41■□□□□ 0.22
EPB42-202ENST00000441366 IBTKQ9P2D0 1353 aaPredicted RBP16.41■□□□□ 0.22
EPB42-202ENST00000441366 NBPF26B4DH59 902 aa16.41■□□□□ 0.22
EPB42-202ENST00000441366 ATP5J2-PTCD1G3V325 749 aa16.41■□□□□ 0.22
EPB42-202ENST00000441366 NBPF14Q5TI25 921 aa16.41■□□□□ 0.22
EPB42-202ENST00000441366 NBPF10Q6P3W6 841 aaKnown RBP16.41■□□□□ 0.22
EPB42-202ENST00000441366 NBPF15Q8N660 670 aa16.41■□□□□ 0.22
EPB42-202ENST00000441366 SYTL4Q96C24 671 aaPredicted RBP16.41■□□□□ 0.22
EPB42-202ENST00000441366 GRM8O00222 908 aa16.4■□□□□ 0.22
EPB42-202ENST00000441366 TOM1O60784 492 aa16.4■□□□□ 0.22
EPB42-202ENST00000441366 NEXNQ0ZGT2 675 aa16.4■□□□□ 0.22
EPB42-202ENST00000441366 PIGBQ92521 554 aa16.4■□□□□ 0.22
EPB42-202ENST00000441366 SUCLG2Q96I99 432 aa16.4■□□□□ 0.22
EPB42-202ENST00000441366 SDSP20132 328 aa16.4■□□□□ 0.22
EPB42-202ENST00000441366 PDE1AP54750 535 aa16.4■□□□□ 0.22
EPB42-202ENST00000441366 POLA2Q14181 598 aa16.4■□□□□ 0.22
EPB42-202ENST00000441366 ZNF330Q9Y3S2 320 aaPredicted RBP16.4■□□□□ 0.22
EPB42-202ENST00000441366 A0A0G2JS52 829 aa16.39■□□□□ 0.21
EPB42-202ENST00000441366 NUTM1Q86Y26 1132 aa16.39■□□□□ 0.21
EPB42-202ENST00000441366 METTL22Q9BUU2 404 aaPredicted RBP16.39■□□□□ 0.21
EPB42-202ENST00000441366 PA2G4Q9UQ80 394 aaKnown RBP16.39■□□□□ 0.21
EPB42-202ENST00000441366 TOGARAM1Q9Y4F4 1720 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms