RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 TEX13AQ9BXU3 409 aaPredicted RBP7.57□□□□□ -1.2
CNOT1-202ENST00000441024 NOL7Q9UMY1 257 aaKnown RBP7.57□□□□□ -1.2
CNOT1-202ENST00000441024 HMGB1P09429 215 aaKnown RBP7.56□□□□□ -1.2
CNOT1-202ENST00000441024 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.56□□□□□ -1.2
CNOT1-202ENST00000441024 IL1RAPL2Q9NP60 686 aa7.56□□□□□ -1.2
CNOT1-202ENST00000441024 FAM13BQ9NYF5 915 aa7.56□□□□□ -1.2
CNOT1-202ENST00000441024 SPATA31E1Q6ZUB1 1445 aa7.56□□□□□ -1.2
CNOT1-202ENST00000441024 TSPOAP1O95153 1857 aa7.56□□□□□ -1.2
CNOT1-202ENST00000441024 ACEP12821 1306 aa7.56□□□□□ -1.2
CNOT1-202ENST00000441024 IGHMBP2P38935 993 aaKnown RBP7.56□□□□□ -1.2
CNOT1-202ENST00000441024 IMMTQ16891 758 aaKnown RBP7.56□□□□□ -1.2
CNOT1-202ENST00000441024 CWC27Q6UX04 472 aaKnown RBP7.56□□□□□ -1.2
CNOT1-202ENST00000441024 TNMDQ9H2S6 317 aa7.56□□□□□ -1.2
CNOT1-202ENST00000441024 GRPEL1Q9HAV7 217 aa7.56□□□□□ -1.2
CNOT1-202ENST00000441024 U3KPZ7 1027 aaPredicted RBP7.56□□□□□ -1.2
CNOT1-202ENST00000441024 ADGRB1O14514 1584 aa7.56□□□□□ -1.2
CNOT1-202ENST00000441024 SETBP1Q9Y6X0 1596 aa7.56□□□□□ -1.2
CNOT1-202ENST00000441024 CBFA2T2O43439 604 aa7.56□□□□□ -1.2
CNOT1-202ENST00000441024 FLIIQ13045 1269 aa7.56□□□□□ -1.2
CNOT1-202ENST00000441024 EXOC6BQ9Y2D4 811 aa7.56□□□□□ -1.2
CNOT1-202ENST00000441024 ZNF652Q9Y2D9 606 aa7.56□□□□□ -1.2
CNOT1-202ENST00000441024 ZC3H6P61129 1189 aaKnown RBP7.55□□□□□ -1.2
CNOT1-202ENST00000441024 FMNL2Q96PY5 1086 aa7.55□□□□□ -1.2
CNOT1-202ENST00000441024 MBIPQ9NS73 344 aa7.55□□□□□ -1.2
CNOT1-202ENST00000441024 TMOD3Q9NYL9 352 aa7.55□□□□□ -1.2
CNOT1-202ENST00000441024 SOS1Q07889 1333 aaPredicted RBP7.55□□□□□ -1.2
CNOT1-202ENST00000441024 RNF214Q8ND24 703 aa7.55□□□□□ -1.2
CNOT1-202ENST00000441024 ARHGAP31Q2M1Z3 1444 aa7.55□□□□□ -1.2
CNOT1-202ENST00000441024 NEXMIFQ5QGS0 1516 aa7.55□□□□□ -1.2
CNOT1-202ENST00000441024 MAP4K4O95819 1239 aaPredicted RBP7.55□□□□□ -1.2
CNOT1-202ENST00000441024 DCTN1Q14203 1278 aa7.55□□□□□ -1.2
CNOT1-202ENST00000441024 NUTM1Q86Y26 1132 aa7.55□□□□□ -1.2
CNOT1-202ENST00000441024 SPATA32Q96LK8 384 aa7.55□□□□□ -1.2
CNOT1-202ENST00000441024 TESK2Q96S53 571 aa7.55□□□□□ -1.2
CNOT1-202ENST00000441024 ARID3AQ99856 593 aa7.55□□□□□ -1.2
CNOT1-202ENST00000441024 MAGEC2Q9UBF1 373 aaPredicted RBP7.55□□□□□ -1.2
CNOT1-202ENST00000441024 TNNT3P45378 269 aaPredicted RBP7.54□□□□□ -1.2
CNOT1-202ENST00000441024 NCBP3Q53F19 620 aaKnown RBP7.54□□□□□ -1.2
CNOT1-202ENST00000441024 MIS18AQ9NYP9 233 aa7.54□□□□□ -1.2
CNOT1-202ENST00000441024 PPIP5K1Q6PFW1 1433 aa7.54□□□□□ -1.2
CNOT1-202ENST00000441024 RRP12Q5JTH9 1297 aaKnown RBP7.54□□□□□ -1.2
CNOT1-202ENST00000441024 ERCC4Q92889 916 aaPredicted RBP7.54□□□□□ -1.2
CNOT1-202ENST00000441024 CDK5RAP3Q96JB5 506 aa7.54□□□□□ -1.2
CNOT1-202ENST00000441024 FKBP4Q02790 459 aaKnown RBP eCLIP7.54□□□□□ -1.2
CNOT1-202ENST00000441024 IFNL2Q8IZJ0 200 aa7.54□□□□□ -1.2
CNOT1-202ENST00000441024 TXLNBQ8N3L3 684 aa7.54□□□□□ -1.2
CNOT1-202ENST00000441024 EVI5LQ96CN4 794 aa7.54□□□□□ -1.2
CNOT1-202ENST00000441024 NRKQ7Z2Y5 1582 aa7.54□□□□□ -1.2
CNOT1-202ENST00000441024 FAM177BA6PVY3 158 aa7.54□□□□□ -1.2
CNOT1-202ENST00000441024 CDR1P51861 262 aa7.54□□□□□ -1.2
CNOT1-202ENST00000441024 STIM1Q13586 685 aa7.54□□□□□ -1.2
CNOT1-202ENST00000441024 SMC2O95347 1197 aa7.53□□□□□ -1.2
CNOT1-202ENST00000441024 CASTP20810 708 aaKnown RBP7.53□□□□□ -1.2
CNOT1-202ENST00000441024 ME1P48163 572 aa7.53□□□□□ -1.2
CNOT1-202ENST00000441024 KRT28Q7Z3Y7 464 aa7.53□□□□□ -1.2
CNOT1-202ENST00000441024 PDILTQ8N807 584 aa7.53□□□□□ -1.2
CNOT1-202ENST00000441024 MYD88Q99836 296 aa7.53□□□□□ -1.2
CNOT1-202ENST00000441024 NUP62CLQ9H1M0 184 aa7.53□□□□□ -1.2
CNOT1-202ENST00000441024 LRRFIP2Q9Y608 721 aaKnown RBP7.53□□□□□ -1.2
CNOT1-202ENST00000441024 STRCP1A6NGW2 1772 aa7.53□□□□□ -1.2
CNOT1-202ENST00000441024 SMTNL1A8MU46 457 aa7.53□□□□□ -1.2
CNOT1-202ENST00000441024 NUCB1Q02818 461 aa7.53□□□□□ -1.2
CNOT1-202ENST00000441024 AK7Q96M32 723 aa7.53□□□□□ -1.2
CNOT1-202ENST00000441024 UBAC1Q9BSL1 405 aa7.53□□□□□ -1.2
CNOT1-202ENST00000441024 CEP131Q9UPN4 1083 aa7.53□□□□□ -1.2
CNOT1-202ENST00000441024 IFIT1P09914 478 aaKnown RBP7.53□□□□□ -1.2
CNOT1-202ENST00000441024 EPS15P42566 896 aa7.53□□□□□ -1.2
CNOT1-202ENST00000441024 STK3Q13188 491 aa7.53□□□□□ -1.2
CNOT1-202ENST00000441024 CEP57L1Q8IYX8 460 aa7.53□□□□□ -1.2
CNOT1-202ENST00000441024 SCAND2PQ9GZW5 306 aaPredicted RBP7.53□□□□□ -1.2
CNOT1-202ENST00000441024 XRN1Q8IZH2 1706 aaKnown RBP7.53□□□□□ -1.2
CNOT1-202ENST00000441024 METTL24Q5JXM2 366 aa7.53□□□□□ -1.2
CNOT1-202ENST00000441024 SOGA3Q5TF21 947 aa7.53□□□□□ -1.2
CNOT1-202ENST00000441024 USP32Q8NFA0 1604 aa7.53□□□□□ -1.2
CNOT1-202ENST00000441024 TDO2P48775 406 aa7.52□□□□□ -1.2
CNOT1-202ENST00000441024 XPCQ01831 940 aaPredicted RBP7.52□□□□□ -1.2
CNOT1-202ENST00000441024 TTC22Q5TAA0 569 aa7.52□□□□□ -1.2
CNOT1-202ENST00000441024 AIDAQ96BJ3 306 aa7.52□□□□□ -1.2
CNOT1-202ENST00000441024 ZNF287Q9HBT7 754 aa7.52□□□□□ -1.2
CNOT1-202ENST00000441024 ECHDC1Q9NTX5 307 aa7.52□□□□□ -1.2
CNOT1-202ENST00000441024 SMARCA5O60264 1052 aaPredicted RBP7.52□□□□□ -1.21
CNOT1-202ENST00000441024 LIMCH1Q9UPQ0 1083 aa7.52□□□□□ -1.21
CNOT1-202ENST00000441024 R3HCC1Q9Y3T6 440 aaKnown RBP7.52□□□□□ -1.21
CNOT1-202ENST00000441024 SHPRHQ149N8 1683 aa7.52□□□□□ -1.21
CNOT1-202ENST00000441024 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.52□□□□□ -1.21
CNOT1-202ENST00000441024 ALDH1L1O75891 902 aa7.52□□□□□ -1.21
CNOT1-202ENST00000441024 SETQ01105 290 aaPredicted RBP7.52□□□□□ -1.21
CNOT1-202ENST00000441024 MRPL50Q8N5N7 158 aaKnown RBP7.52□□□□□ -1.21
CNOT1-202ENST00000441024 CCDC196A0A1B0GTZ2 297 aa7.52□□□□□ -1.21
CNOT1-202ENST00000441024 CADPS2Q86UW7 1296 aa7.52□□□□□ -1.21
CNOT1-202ENST00000441024 CCAR1Q8IX12 1150 aaKnown RBP7.52□□□□□ -1.21
CNOT1-202ENST00000441024 TBC1D32Q96NH3 1257 aa7.52□□□□□ -1.21
CNOT1-202ENST00000441024 OFD1O75665 1012 aa7.51□□□□□ -1.21
CNOT1-202ENST00000441024 PRPF40BQ6NWY9 871 aaKnown RBP7.51□□□□□ -1.21
CNOT1-202ENST00000441024 MPRIPQ6WCQ1 1025 aa7.51□□□□□ -1.21
CNOT1-202ENST00000441024 ZNHIT6Q9NWK9 470 aaKnown RBP7.51□□□□□ -1.21
CNOT1-202ENST00000441024 RAI14Q9P0K7 980 aa7.51□□□□□ -1.21
CNOT1-202ENST00000441024 HMG20BQ9P0W2 317 aa7.51□□□□□ -1.21
CNOT1-202ENST00000441024 LRP2BPQ9P2M1 347 aa7.51□□□□□ -1.21
CNOT1-202ENST00000441024 DMRT2Q9Y5R5 561 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms