RNA–Protein interactions for RNA: ENST00000440452.5

PCGF3-207, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 3,609 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-207ENST00000440452 PREX1Q8TCU6 1659 aa14.93□□□□□ -0.02
PCGF3-207ENST00000440452 NPHP1O15259 732 aa14.92□□□□□ -0.02
PCGF3-207ENST00000440452 KCNA6P17658 529 aa14.92□□□□□ -0.02
PCGF3-207ENST00000440452 U2AF2P26368 475 aaKnown RBP eCLIP14.92□□□□□ -0.027e-20■□□□□ 10.2
PCGF3-207ENST00000440452 LRSAM1Q6UWE0 723 aa14.92□□□□□ -0.02
PCGF3-207ENST00000440452 NSFL1CQ9UNZ2 370 aaKnown RBP14.92□□□□□ -0.02
PCGF3-207ENST00000440452 ESYT1Q9BSJ8 1104 aa14.92□□□□□ -0.02
PCGF3-207ENST00000440452 SRCIN1Q9C0H9 1055 aa14.92□□□□□ -0.02
PCGF3-207ENST00000440452 CHPF2Q9P2E5 772 aa14.92□□□□□ -0.02
PCGF3-207ENST00000440452 MED14O60244 1454 aa14.92□□□□□ -0.02
PCGF3-207ENST00000440452 AATKQ6ZMQ8 1374 aa14.92□□□□□ -0.02
PCGF3-207ENST00000440452 CDK12Q9NYV4 1490 aaPredicted RBP14.92□□□□□ -0.02
PCGF3-207ENST00000440452 NBPF7P0C2Y1 421 aaPredicted RBP14.91□□□□□ -0.02
PCGF3-207ENST00000440452 DDIT3P35638 169 aa14.91□□□□□ -0.02
PCGF3-207ENST00000440452 NOLC1Q14978 699 aaKnown RBP eCLIP14.91□□□□□ -0.02
PCGF3-207ENST00000440452 ZNF445P59923 1031 aa14.91□□□□□ -0.02
PCGF3-207ENST00000440452 DMTNQ08495 405 aa14.91□□□□□ -0.02
PCGF3-207ENST00000440452 TERF1P54274 439 aa14.91□□□□□ -0.02
PCGF3-207ENST00000440452 ZNF530Q6P9A1 599 aaPredicted RBP14.9□□□□□ -0.02
PCGF3-207ENST00000440452 PA2G4Q9UQ80 394 aaKnown RBP14.9□□□□□ -0.02
PCGF3-207ENST00000440452 PIP4K2AP48426 406 aaPredicted RBP14.9□□□□□ -0.02
PCGF3-207ENST00000440452 GPT2Q8TD30 523 aa14.9□□□□□ -0.02
PCGF3-207ENST00000440452 DIAPH3Q9NSV4 1193 aa14.9□□□□□ -0.02
PCGF3-207ENST00000440452 TMEM2Q9UHN6 1383 aa14.9□□□□□ -0.02
PCGF3-207ENST00000440452 FIBPO43427 364 aa14.9□□□□□ -0.02
PCGF3-207ENST00000440452 PHF14O94880 888 aa14.9□□□□□ -0.02
PCGF3-207ENST00000440452 MBD3O95983 291 aa14.9□□□□□ -0.02
PCGF3-207ENST00000440452 HOXC9P31274 260 aa14.9□□□□□ -0.02
PCGF3-207ENST00000440452 HS1BP3Q53T59 392 aa14.9□□□□□ -0.02
PCGF3-207ENST00000440452 CHMLP26374 656 aa14.89□□□□□ -0.03
PCGF3-207ENST00000440452 ZBTB22O15209 634 aa14.89□□□□□ -0.03
PCGF3-207ENST00000440452 HCLS1P14317 486 aaPredicted RBP14.89□□□□□ -0.03
PCGF3-207ENST00000440452 VIRMAQ69YN4 1812 aaKnown RBP14.89□□□□□ -0.03
PCGF3-207ENST00000440452 USP44Q9H0E7 712 aa14.89□□□□□ -0.03
PCGF3-207ENST00000440452 FLT4P35916 1363 aa14.89□□□□□ -0.03
PCGF3-207ENST00000440452 ATP8B2P98198 1209 aa14.89□□□□□ -0.03
PCGF3-207ENST00000440452 TCEANC2Q96MN5 208 aa14.89□□□□□ -0.03
PCGF3-207ENST00000440452 CWC22Q9HCG8 908 aaKnown RBP14.89□□□□□ -0.03
PCGF3-207ENST00000440452 VPS37CA5D8V6 355 aaPredicted RBP14.88□□□□□ -0.03
PCGF3-207ENST00000440452 BTBD11A6QL63 1104 aa14.88□□□□□ -0.03
PCGF3-207ENST00000440452 ADCY5O95622 1261 aa14.88□□□□□ -0.03
PCGF3-207ENST00000440452 CHMP4AQ9BY43 222 aa14.88□□□□□ -0.03
PCGF3-207ENST00000440452 PPP6R1Q9UPN7 881 aa14.88□□□□□ -0.03
PCGF3-207ENST00000440452 ATP10DQ9P241 1426 aa14.88□□□□□ -0.03
PCGF3-207ENST00000440452 PLEKHG3A1L390 1219 aa14.88□□□□□ -0.03
PCGF3-207ENST00000440452 MYL6BP14649 208 aa14.88□□□□□ -0.03
PCGF3-207ENST00000440452 IL25Q9H293 177 aa14.88□□□□□ -0.03
PCGF3-207ENST00000440452 CLTCQ00610 1675 aaKnown RBP14.88□□□□□ -0.03
PCGF3-207ENST00000440452 SETD1BQ9UPS6 1966 aaKnown RBP14.88□□□□□ -0.03
PCGF3-207ENST00000440452 MCM5P33992 734 aa14.87□□□□□ -0.03
PCGF3-207ENST00000440452 MYRIPQ8NFW9 859 aa14.87□□□□□ -0.03
PCGF3-207ENST00000440452 ATP2B3Q16720 1220 aa14.87□□□□□ -0.03
PCGF3-207ENST00000440452 CWF19L2Q2TBE0 894 aaKnown RBP14.87□□□□□ -0.03
PCGF3-207ENST00000440452 NAP1L2Q9ULW6 460 aaPredicted RBP14.87□□□□□ -0.03
PCGF3-207ENST00000440452 IFIT2P09913 472 aaKnown RBP14.86□□□□□ -0.03
PCGF3-207ENST00000440452 C1orf141Q5JVX7 400 aa14.86□□□□□ -0.03
PCGF3-207ENST00000440452 RHPN1Q8TCX5 695 aa14.86□□□□□ -0.03
PCGF3-207ENST00000440452 ZDHHC9Q9Y397 364 aa14.86□□□□□ -0.03
PCGF3-207ENST00000440452 USP6P35125 1406 aa14.86□□□□□ -0.03
PCGF3-207ENST00000440452 ZC3H6P61129 1189 aaKnown RBP14.86□□□□□ -0.03
PCGF3-207ENST00000440452 CCDC8Q9H0W5 538 aaPredicted RBP14.86□□□□□ -0.03
PCGF3-207ENST00000440452 PRAMEF22A3QJZ6 481 aa14.85□□□□□ -0.03
PCGF3-207ENST00000440452 ZSCAN20P17040 1043 aaPredicted RBP14.85□□□□□ -0.03
PCGF3-207ENST00000440452 CASTP20810 708 aaKnown RBP14.85□□□□□ -0.03
PCGF3-207ENST00000440452 FOSBP53539 338 aa14.85□□□□□ -0.03
PCGF3-207ENST00000440452 NBPF6Q5VWK0 638 aa14.85□□□□□ -0.03
PCGF3-207ENST00000440452 NBPF4Q96M43 638 aa14.85□□□□□ -0.03
PCGF3-207ENST00000440452 BCL2L12Q9HB09 334 aa14.85□□□□□ -0.03
PCGF3-207ENST00000440452 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.85□□□□□ -0.03
PCGF3-207ENST00000440452 FERMT3Q86UX7 667 aa14.85□□□□□ -0.03
PCGF3-207ENST00000440452 ZNF330Q9Y3S2 320 aaPredicted RBP14.85□□□□□ -0.03
PCGF3-207ENST00000440452 GADD45BO75293 160 aaPredicted RBP14.85□□□□□ -0.03
PCGF3-207ENST00000440452 PPFIA3O75145 1194 aa14.84□□□□□ -0.03
PCGF3-207ENST00000440452 PRPF40BQ6NWY9 871 aaKnown RBP14.84□□□□□ -0.03
PCGF3-207ENST00000440452 CCDC83Q8IWF9 413 aa14.84□□□□□ -0.03
PCGF3-207ENST00000440452 CLASRPQ8N2M8 674 aaKnown RBP14.84□□□□□ -0.03
PCGF3-207ENST00000440452 DNAAF4Q8WXU2 420 aa14.84□□□□□ -0.03
PCGF3-207ENST00000440452 C16orf45Q96MC5 204 aaPredicted RBP14.84□□□□□ -0.03
PCGF3-207ENST00000440452 KIAA0232Q92628 1395 aa14.84□□□□□ -0.03
PCGF3-207ENST00000440452 STK3Q13188 491 aa14.84□□□□□ -0.03
PCGF3-207ENST00000440452 CNTROBQ8N137 903 aa14.84□□□□□ -0.03
PCGF3-207ENST00000440452 KLHDC4Q8TBB5 520 aa14.84□□□□□ -0.03
PCGF3-207ENST00000440452 CSB-PGBD3P0DP91 1061 aa14.84□□□□□ -0.03
PCGF3-207ENST00000440452 AACSQ86V21 672 aa14.84□□□□□ -0.03
PCGF3-207ENST00000440452 THEMISQ8N1K5 641 aaPredicted RBP14.84□□□□□ -0.03
PCGF3-207ENST00000440452 SMC3Q9UQE7 1217 aa14.84□□□□□ -0.03
PCGF3-207ENST00000440452 SOS1Q07889 1333 aaPredicted RBP14.83□□□□□ -0.03
PCGF3-207ENST00000440452 LETM1O95202 739 aaPredicted RBP14.83□□□□□ -0.04
PCGF3-207ENST00000440452 TNNT3P45378 269 aaPredicted RBP14.83□□□□□ -0.04
PCGF3-207ENST00000440452 SLC39A6Q13433 755 aa14.83□□□□□ -0.04
PCGF3-207ENST00000440452 PRIMPOLQ96LW4 560 aa14.83□□□□□ -0.04
PCGF3-207ENST00000440452 JAKMIP1Q96N16 626 aaKnown RBP14.83□□□□□ -0.04
PCGF3-207ENST00000440452 GTPBP4Q9BZE4 634 aaKnown RBP14.83□□□□□ -0.04
PCGF3-207ENST00000440452 PHF8Q9UPP1 1060 aa14.83□□□□□ -0.04
PCGF3-207ENST00000440452 NCOA3Q9Y6Q9 1424 aa14.83□□□□□ -0.04
PCGF3-207ENST00000440452 MAP3K2Q9Y2U5 619 aa14.83□□□□□ -0.04
PCGF3-207ENST00000440452 KIF20BQ96Q89 1820 aa14.82□□□□□ -0.04
PCGF3-207ENST00000440452 SBNO1A3KN83 1393 aa14.82□□□□□ -0.04
PCGF3-207ENST00000440452 GOLGA6L4A6NEF3 574 aa14.82□□□□□ -0.04
PCGF3-207ENST00000440452 NECAB1Q8N987 351 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms