RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 ADCY9O60503 1353 aa12.81□□□□□ -0.36
CPNE1-218ENST00000439806 GIGYF1O75420 1035 aaPredicted RBP12.81□□□□□ -0.36
CPNE1-218ENST00000439806 ALDH1L1O75891 902 aa12.81□□□□□ -0.36
CPNE1-218ENST00000439806 POLA2Q14181 598 aa12.81□□□□□ -0.36
CPNE1-218ENST00000439806 PPP1R42Q7Z4L9 355 aa12.81□□□□□ -0.36
CPNE1-218ENST00000439806 SSH3Q8TE77 659 aa12.81□□□□□ -0.36
CPNE1-218ENST00000439806 USP26Q9BXU7 913 aa12.81□□□□□ -0.36
CPNE1-218ENST00000439806 DNAJC5Q9H3Z4 198 aa12.81□□□□□ -0.36
CPNE1-218ENST00000439806 HYPKQ9NX55 129 aa12.81□□□□□ -0.36
CPNE1-218ENST00000439806 SALL3Q9BXA9 1300 aa12.81□□□□□ -0.36
CPNE1-218ENST00000439806 PLEKHG2Q9H7P9 1386 aa12.81□□□□□ -0.36
CPNE1-218ENST00000439806 HEG1Q9ULI3 1381 aa12.81□□□□□ -0.36
CPNE1-218ENST00000439806 MEGF6O75095 1541 aa12.8□□□□□ -0.36
CPNE1-218ENST00000439806 SURF6O75683 361 aaKnown RBP12.8□□□□□ -0.36
CPNE1-218ENST00000439806 DDX58O95786 925 aaKnown RBP12.8□□□□□ -0.36
CPNE1-218ENST00000439806 HSP90AB4PQ58FF6 505 aa12.8□□□□□ -0.36
CPNE1-218ENST00000439806 MAP3K2Q9Y2U5 619 aa12.8□□□□□ -0.36
CPNE1-218ENST00000439806 KDM6AO15550 1401 aaPredicted RBP12.79□□□□□ -0.36
CPNE1-218ENST00000439806 LAMB4A4D0S4 1761 aa12.79□□□□□ -0.36
CPNE1-218ENST00000439806 TRIM6-TRIM34B2RNG4 842 aa12.79□□□□□ -0.36
CPNE1-218ENST00000439806 HSPA2P54652 639 aa12.79□□□□□ -0.36
CPNE1-218ENST00000439806 KSR2Q6VAB6 950 aa12.79□□□□□ -0.36
CPNE1-218ENST00000439806 IFNL2Q8IZJ0 200 aa12.79□□□□□ -0.36
CPNE1-218ENST00000439806 RILPL2Q969X0 211 aa12.79□□□□□ -0.36
CPNE1-218ENST00000439806 RBM42Q9BTD8 480 aaKnown RBP12.79□□□□□ -0.36
CPNE1-218ENST00000439806 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.79□□□□□ -0.361e-6■■□□□ 12.2
CPNE1-218ENST00000439806 STAP2Q9UGK3 403 aa12.79□□□□□ -0.36
CPNE1-218ENST00000439806 SPATA31A3Q5VYP0 1347 aa12.79□□□□□ -0.36
CPNE1-218ENST00000439806 AFDNP55196 1824 aaKnown RBP12.78□□□□□ -0.36
CPNE1-218ENST00000439806 SRGAP3O43295 1099 aa12.78□□□□□ -0.36
CPNE1-218ENST00000439806 PHKG2P15735 406 aa12.78□□□□□ -0.36
CPNE1-218ENST00000439806 MCCP23508 829 aa12.78□□□□□ -0.36
CPNE1-218ENST00000439806 MCM4P33991 863 aa12.78□□□□□ -0.36
CPNE1-218ENST00000439806 OS9Q13438 667 aaPredicted RBP12.78□□□□□ -0.36
CPNE1-218ENST00000439806 CHRNA2Q15822 529 aa12.78□□□□□ -0.36
CPNE1-218ENST00000439806 CABLES1Q8TDN4 633 aa12.78□□□□□ -0.36
CPNE1-218ENST00000439806 KIF1BPQ96EK5 621 aa12.78□□□□□ -0.36
CPNE1-218ENST00000439806 SLC52A2Q9HAB3 445 aa12.78□□□□□ -0.36
CPNE1-218ENST00000439806 IL1RAPL2Q9NP60 686 aa12.78□□□□□ -0.36
CPNE1-218ENST00000439806 DDX21Q9NR30 783 aaKnown RBP eCLIP12.78□□□□□ -0.36
CPNE1-218ENST00000439806 C9orf78Q9NZ63 289 aaPredicted RBP12.78□□□□□ -0.36
CPNE1-218ENST00000439806 MRC1P22897 1456 aa12.78□□□□□ -0.36
CPNE1-218ENST00000439806 DDX11L8A8MPP1 907 aa12.77□□□□□ -0.37
CPNE1-218ENST00000439806 ST18O60284 1047 aa12.77□□□□□ -0.37
CPNE1-218ENST00000439806 NBPF7P0C2Y1 421 aaPredicted RBP12.77□□□□□ -0.37
CPNE1-218ENST00000439806 PROSER3Q2NL68 480 aa12.77□□□□□ -0.37
CPNE1-218ENST00000439806 TSHZ3Q63HK5 1081 aa12.77□□□□□ -0.37
CPNE1-218ENST00000439806 RHPN1Q8TCX5 695 aa12.77□□□□□ -0.37
CPNE1-218ENST00000439806 FOXD4L1Q9NU39 408 aa12.77□□□□□ -0.37
CPNE1-218ENST00000439806 CPDO75976 1380 aa12.77□□□□□ -0.37
CPNE1-218ENST00000439806 PRAMEF22A3QJZ6 481 aa12.76□□□□□ -0.37
CPNE1-218ENST00000439806 CD2BP2O95400 341 aaKnown RBP12.76□□□□□ -0.37
CPNE1-218ENST00000439806 DDIT3P35638 169 aa12.76□□□□□ -0.37
CPNE1-218ENST00000439806 ZNF790Q6PG37 636 aa12.76□□□□□ -0.37
CPNE1-218ENST00000439806 NUTM1Q86Y26 1132 aa12.76□□□□□ -0.37
CPNE1-218ENST00000439806 TTC5Q8N0Z6 440 aa12.76□□□□□ -0.37
CPNE1-218ENST00000439806 GBP4Q96PP9 640 aa12.76□□□□□ -0.37
CPNE1-218ENST00000439806 ESYT1Q9BSJ8 1104 aa12.76□□□□□ -0.37
CPNE1-218ENST00000439806 ABCA3Q99758 1704 aa12.76□□□□□ -0.37
CPNE1-218ENST00000439806 STRCQ7RTU9 1775 aa12.76□□□□□ -0.37
CPNE1-218ENST00000439806 AIMP1Q12904 312 aaKnown RBP12.75□□□□□ -0.37
CPNE1-218ENST00000439806 SLC39A6Q13433 755 aa12.75□□□□□ -0.37
CPNE1-218ENST00000439806 RIC3Q7Z5B4 369 aa12.75□□□□□ -0.37
CPNE1-218ENST00000439806 LINS1Q8NG48 757 aa12.75□□□□□ -0.37
CPNE1-218ENST00000439806 DCAF5Q96JK2 942 aa12.75□□□□□ -0.37
CPNE1-218ENST00000439806 ARFGEF2Q9Y6D5 1785 aa12.74□□□□□ -0.37
CPNE1-218ENST00000439806 PTMSP20962 102 aa12.74□□□□□ -0.37
CPNE1-218ENST00000439806 CHMLP26374 656 aa12.74□□□□□ -0.37
CPNE1-218ENST00000439806 NEXNQ0ZGT2 675 aa12.74□□□□□ -0.37
CPNE1-218ENST00000439806 MTX1Q13505 466 aa12.74□□□□□ -0.37
CPNE1-218ENST00000439806 LARP1Q6PKG0 1096 aaKnown RBP12.74□□□□□ -0.37
CPNE1-218ENST00000439806 ERC1Q8IUD2 1116 aa12.74□□□□□ -0.37
CPNE1-218ENST00000439806 CABP4P57796 275 aa12.73□□□□□ -0.37
CPNE1-218ENST00000439806 RAB3GAP1Q15042 981 aa12.73□□□□□ -0.37
CPNE1-218ENST00000439806 CWF19L2Q2TBE0 894 aaKnown RBP12.73□□□□□ -0.37
CPNE1-218ENST00000439806 BRINP3Q76B58 766 aa12.73□□□□□ -0.37
CPNE1-218ENST00000439806 CNTROBQ8N137 903 aa12.73□□□□□ -0.37
CPNE1-218ENST00000439806 NFATC2IPQ8NCF5 419 aa12.73□□□□□ -0.37
CPNE1-218ENST00000439806 GPATCH3Q96I76 525 aa12.73□□□□□ -0.37
CPNE1-218ENST00000439806 GRM8O00222 908 aa12.72□□□□□ -0.37
CPNE1-218ENST00000439806 SNRPA1P09661 255 aaKnown RBP12.72□□□□□ -0.37
CPNE1-218ENST00000439806 MYL6BP14649 208 aa12.72□□□□□ -0.37
CPNE1-218ENST00000439806 CLASRPQ8N2M8 674 aaKnown RBP12.72□□□□□ -0.37
CPNE1-218ENST00000439806 TNPO1Q92973 898 aaKnown RBP12.72□□□□□ -0.37
CPNE1-218ENST00000439806 FMNL2Q96PY5 1086 aa12.72□□□□□ -0.37
CPNE1-218ENST00000439806 ANO2Q9NQ90 1003 aa12.72□□□□□ -0.37
CPNE1-218ENST00000439806 PRDM11Q9NQV5 511 aa12.72□□□□□ -0.37
CPNE1-218ENST00000439806 UTYO14607 1347 aa12.71□□□□□ -0.37
CPNE1-218ENST00000439806 TTC41PQ6P2S7 1318 aa12.71□□□□□ -0.37
CPNE1-218ENST00000439806 CYP27B1O15528 508 aa12.71□□□□□ -0.37
CPNE1-218ENST00000439806 PDIA6Q15084 440 aa12.71□□□□□ -0.37
CPNE1-218ENST00000439806 L1TD1Q5T7N2 865 aaKnown RBP12.71□□□□□ -0.37
CPNE1-218ENST00000439806 XAGE3Q8WTP9 111 aa12.71□□□□□ -0.37
CPNE1-218ENST00000439806 SUCLG2Q96I99 432 aa12.71□□□□□ -0.37
CPNE1-218ENST00000439806 ZNF496Q96IT1 587 aaPredicted RBP12.71□□□□□ -0.37
CPNE1-218ENST00000439806 WDR17Q8IZU2 1322 aa12.7□□□□□ -0.38
CPNE1-218ENST00000439806 PCDH11XQ9BZA7 1347 aa12.7□□□□□ -0.38
CPNE1-218ENST00000439806 PCDH11YQ9BZA8 1340 aa12.7□□□□□ -0.38
CPNE1-218ENST00000439806 USP42Q9H9J4 1324 aaKnown RBP12.7□□□□□ -0.38
CPNE1-218ENST00000439806 EPB41L2O43491 1005 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms