RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 GSTO1P78417 241 aa14.28□□□□□ -0.12
NEK1-201ENST00000439128 ZC3H12CQ9C0D7 883 aaKnown RBP14.28□□□□□ -0.12
NEK1-201ENST00000439128 NAT10Q9H0A0 1025 aaKnown RBP14.28□□□□□ -0.12
NEK1-201ENST00000439128 UNC13AQ9UPW8 1703 aa14.27□□□□□ -0.12
NEK1-201ENST00000439128 TRIM21P19474 475 aaKnown RBP14.27□□□□□ -0.12
NEK1-201ENST00000439128 TMEM57Q8N5G2 664 aa14.27□□□□□ -0.12
NEK1-201ENST00000439128 JMYQ8N9B5 988 aa14.27□□□□□ -0.12
NEK1-201ENST00000439128 ZNF592Q92610 1267 aa14.27□□□□□ -0.12
NEK1-201ENST00000439128 DDX17Q92841 729 aaKnown RBP14.27□□□□□ -0.12
NEK1-201ENST00000439128 CDCA7Q9BWT1 371 aaPredicted RBP14.27□□□□□ -0.12
NEK1-201ENST00000439128 LRRFIP2Q9Y608 721 aaKnown RBP14.27□□□□□ -0.12
NEK1-201ENST00000439128 EIF4G3O43432 1585 aaKnown RBP14.27□□□□□ -0.12
NEK1-201ENST00000439128 JAKMIP1Q96N16 626 aaKnown RBP14.27□□□□□ -0.12
NEK1-201ENST00000439128 EHMT1Q9H9B1 1298 aa14.27□□□□□ -0.12
NEK1-201ENST00000439128 DUOX2Q9NRD8 1548 aa14.27□□□□□ -0.13
NEK1-201ENST00000439128 RAB11FIP3O75154 756 aa14.27□□□□□ -0.13
NEK1-201ENST00000439128 MPHOSPH6Q99547 160 aaKnown RBP14.27□□□□□ -0.13
NEK1-201ENST00000439128 KINO60870 393 aaKnown RBP14.27□□□□□ -0.13
NEK1-201ENST00000439128 FLIIQ13045 1269 aa14.26□□□□□ -0.13
NEK1-201ENST00000439128 IQCA1Q86XH1 822 aa14.26□□□□□ -0.13
NEK1-201ENST00000439128 HOMER1Q86YM7 354 aa14.26□□□□□ -0.13
NEK1-201ENST00000439128 PICALMQ13492 652 aa14.26□□□□□ -0.13
NEK1-201ENST00000439128 ABCC2Q92887 1545 aa14.26□□□□□ -0.13
NEK1-201ENST00000439128 ZNF804AQ7Z570 1209 aa14.26□□□□□ -0.13
NEK1-201ENST00000439128 CTCFLQ8NI51 663 aaPredicted RBP14.26□□□□□ -0.13
NEK1-201ENST00000439128 SNRKQ9NRH2 765 aa14.26□□□□□ -0.13
NEK1-201ENST00000439128 NSFL1CQ9UNZ2 370 aaKnown RBP14.26□□□□□ -0.13
NEK1-201ENST00000439128 WASF1Q92558 559 aa14.26□□□□□ -0.13
NEK1-201ENST00000439128 ORAI2Q96SN7 254 aa14.26□□□□□ -0.13
NEK1-201ENST00000439128 IQSEC3Q9UPP2 1182 aaPredicted RBP14.26□□□□□ -0.13
NEK1-201ENST00000439128 PCDH11XQ9BZA7 1347 aa14.26□□□□□ -0.13
NEK1-201ENST00000439128 PCDH11YQ9BZA8 1340 aa14.26□□□□□ -0.13
NEK1-201ENST00000439128 AKAP4Q5JQC9 854 aa14.26□□□□□ -0.13
NEK1-201ENST00000439128 TRMT1LQ7Z2T5 733 aaKnown RBP14.26□□□□□ -0.13
NEK1-201ENST00000439128 NFATC2IPQ8NCF5 419 aa14.25□□□□□ -0.13
NEK1-201ENST00000439128 PDRG1Q9NUG6 133 aa14.25□□□□□ -0.13
NEK1-201ENST00000439128 XAGE3Q8WTP9 111 aa14.25□□□□□ -0.13
NEK1-201ENST00000439128 CHD1LQ86WJ1 897 aa14.25□□□□□ -0.13
NEK1-201ENST00000439128 CHMP5Q9NZZ3 219 aa14.25□□□□□ -0.13
NEK1-201ENST00000439128 TBX22Q9Y458 520 aa14.25□□□□□ -0.13
NEK1-201ENST00000439128 KRT32Q14532 448 aa14.25□□□□□ -0.13
NEK1-201ENST00000439128 U3KPZ7 1027 aaPredicted RBP14.25□□□□□ -0.13
NEK1-201ENST00000439128 ATP10AO60312 1499 aa14.25□□□□□ -0.13
NEK1-201ENST00000439128 PI4KAP2A4QPH2 592 aa14.24□□□□□ -0.13
NEK1-201ENST00000439128 PPM1FP49593 454 aaPredicted RBP14.24□□□□□ -0.13
NEK1-201ENST00000439128 PI4KAP1Q8N8J0 262 aa14.24□□□□□ -0.13
NEK1-201ENST00000439128 SMARCA5O60264 1052 aaPredicted RBP14.24□□□□□ -0.13
NEK1-201ENST00000439128 STIM1Q13586 685 aa14.24□□□□□ -0.13
NEK1-201ENST00000439128 RBM17Q96I25 401 aaKnown RBP14.24□□□□□ -0.13
NEK1-201ENST00000439128 EYA3Q99504 573 aa14.24□□□□□ -0.13
NEK1-201ENST00000439128 ZRANB1Q9UGI0 708 aa14.24□□□□□ -0.13
NEK1-201ENST00000439128 LIG1P18858 919 aa14.24□□□□□ -0.13
NEK1-201ENST00000439128 VAT1LQ9HCJ6 419 aa14.24□□□□□ -0.13
NEK1-201ENST00000439128 FAM13BQ9NYF5 915 aa14.24□□□□□ -0.13
NEK1-201ENST00000439128 TTF1Q15361 905 aaPredicted RBP14.24□□□□□ -0.13
NEK1-201ENST00000439128 GLRX3O76003 335 aaKnown RBP14.24□□□□□ -0.13
NEK1-201ENST00000439128 COPS6Q7L5N1 327 aa14.24□□□□□ -0.13
NEK1-201ENST00000439128 RDXP35241 583 aaKnown RBP14.23□□□□□ -0.13
NEK1-201ENST00000439128 MCM2P49736 904 aa14.23□□□□□ -0.13
NEK1-201ENST00000439128 FILIP1LQ4L180 1135 aa14.23□□□□□ -0.13
NEK1-201ENST00000439128 RNF41Q9H4P4 317 aaPredicted RBP14.23□□□□□ -0.13
NEK1-201ENST00000439128 CCDC82Q8N4S0 544 aa14.23□□□□□ -0.13
NEK1-201ENST00000439128 NEBLO76041 1014 aa14.23□□□□□ -0.13
NEK1-201ENST00000439128 KIF21AQ7Z4S6 1674 aa14.23□□□□□ -0.13
NEK1-201ENST00000439128 ZNF213O14771 459 aa14.22□□□□□ -0.13
NEK1-201ENST00000439128 PLS1Q14651 629 aa14.22□□□□□ -0.13
NEK1-201ENST00000439128 TTLL5Q6EMB2 1281 aa14.22□□□□□ -0.13
NEK1-201ENST00000439128 CNBD1Q8NA66 436 aa14.22□□□□□ -0.13
NEK1-201ENST00000439128 CHPF2Q9P2E5 772 aa14.22□□□□□ -0.13
NEK1-201ENST00000439128 NSD2O96028 1365 aa14.22□□□□□ -0.13
NEK1-201ENST00000439128 ME1P48163 572 aa14.22□□□□□ -0.13
NEK1-201ENST00000439128 TSPY2A6NKD2 308 aa14.22□□□□□ -0.13
NEK1-201ENST00000439128 PDE4BQ07343 736 aa14.22□□□□□ -0.13
NEK1-201ENST00000439128 GOLIM4O00461 696 aa14.22□□□□□ -0.13
NEK1-201ENST00000439128 MX1P20591 662 aa14.22□□□□□ -0.13
NEK1-201ENST00000439128 CRNKL1Q9BZJ0 848 aaKnown RBP14.22□□□□□ -0.13
NEK1-201ENST00000439128 QTRT2Q9H974 415 aaKnown RBP14.22□□□□□ -0.13
NEK1-201ENST00000439128 ZGPATQ8N5A5 531 aaKnown RBP14.21□□□□□ -0.13
NEK1-201ENST00000439128 ABCC11Q96J66 1382 aa14.21□□□□□ -0.13
NEK1-201ENST00000439128 RABEP1Q15276 862 aa14.21□□□□□ -0.13
NEK1-201ENST00000439128 FIBPO43427 364 aa14.21□□□□□ -0.13
NEK1-201ENST00000439128 SEPT11Q9NVA2 429 aaKnown RBP14.21□□□□□ -0.13
NEK1-201ENST00000439128 RXRBP28702 533 aa14.21□□□□□ -0.13
NEK1-201ENST00000439128 CCDC173Q0VFZ6 552 aa14.21□□□□□ -0.13
NEK1-201ENST00000439128 ANKRD36BQ8N2N9 1353 aa14.21□□□□□ -0.13
NEK1-201ENST00000439128 DNAI2Q9GZS0 605 aa14.21□□□□□ -0.13
NEK1-201ENST00000439128 PEG3Q9GZU2 1588 aa14.21□□□□□ -0.14
NEK1-201ENST00000439128 PIK3R4Q99570 1358 aa14.21□□□□□ -0.14
NEK1-201ENST00000439128 EIF6P56537 245 aaKnown RBP14.2□□□□□ -0.14
NEK1-201ENST00000439128 SLC12A7Q9Y666 1083 aa14.2□□□□□ -0.14
NEK1-201ENST00000439128 NUP153P49790 1475 aaKnown RBP14.2□□□□□ -0.14
NEK1-201ENST00000439128 SSH1Q8WYL5 1049 aa14.2□□□□□ -0.14
NEK1-201ENST00000439128 CCDC87Q9NVE4 849 aa14.2□□□□□ -0.14
NEK1-201ENST00000439128 UQCRFS1P1P0C7P4 283 aa14.2□□□□□ -0.14
NEK1-201ENST00000439128 ALDH1L2Q3SY69 923 aa14.2□□□□□ -0.14
NEK1-201ENST00000439128 EAPPQ56P03 285 aaPredicted RBP14.2□□□□□ -0.14
NEK1-201ENST00000439128 LARP1BQ659C4 914 aaKnown RBP14.2□□□□□ -0.14
NEK1-201ENST00000439128 DCAF5Q96JK2 942 aa14.2□□□□□ -0.14
NEK1-201ENST00000439128 WDR62O43379 1518 aa14.2□□□□□ -0.14
NEK1-201ENST00000439128 H0YIN7 160 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms