RNA–Protein interactions for RNA: ENST00000438067.5

PTCH2-202, Transcript of patched 2, humanhuman

TSL 3

Gene PTCH2, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-202ENST00000438067 DIAPH1O60610 1272 aaKnown RBP23.48■■□□□ 1.35
PTCH2-202ENST00000438067 RBM46Q8TBY0 533 aaKnown RBP23.48■■□□□ 1.35
PTCH2-202ENST00000438067 ZBTB1Q9Y2K1 713 aa23.48■■□□□ 1.35
PTCH2-202ENST00000438067 VSIG10Q8N0Z9 540 aa23.47■■□□□ 1.35
PTCH2-202ENST00000438067 ADAMTS7Q9UKP4 1686 aa23.47■■□□□ 1.35
PTCH2-202ENST00000438067 MRC1P22897 1456 aa23.46■■□□□ 1.35
PTCH2-202ENST00000438067 C16orf71Q8IYS4 520 aaPredicted RBP23.46■■□□□ 1.35
PTCH2-202ENST00000438067 KDM2BQ8NHM5 1336 aa23.46■■□□□ 1.35
PTCH2-202ENST00000438067 BCL2L12Q9HB09 334 aa23.46■■□□□ 1.35
PTCH2-202ENST00000438067 COL15A1P39059 1388 aa23.45■■□□□ 1.34
PTCH2-202ENST00000438067 CC2D1BQ5T0F9 858 aaKnown RBP23.45■■□□□ 1.34
PTCH2-202ENST00000438067 KCPQ6ZWJ8 1503 aa23.44■■□□□ 1.34
PTCH2-202ENST00000438067 ARFGEF1Q9Y6D6 1849 aa23.44■■□□□ 1.34
PTCH2-202ENST00000438067 SERPINB2P05120 415 aa23.43■■□□□ 1.34
PTCH2-202ENST00000438067 RRAGCQ9HB90 399 aa23.43■■□□□ 1.34
PTCH2-202ENST00000438067 CANXP27824 592 aaKnown RBP23.42■■□□□ 1.34
PTCH2-202ENST00000438067 STARD3NLO95772 234 aa23.41■■□□□ 1.34
PTCH2-202ENST00000438067 FSTL1Q12841 308 aa23.41■■□□□ 1.34
PTCH2-202ENST00000438067 EIF5P55010 431 aaKnown RBP23.4■■□□□ 1.34
PTCH2-202ENST00000438067 TTC5Q8N0Z6 440 aa23.4■■□□□ 1.34
PTCH2-202ENST00000438067 RASSF7Q02833 373 aa23.39■■□□□ 1.33
PTCH2-202ENST00000438067 TTLL6Q8N841 843 aa23.39■■□□□ 1.33
PTCH2-202ENST00000438067 IL17REQ8NFR9 667 aa23.39■■□□□ 1.33
PTCH2-202ENST00000438067 C2CD5Q86YS7 1000 aa23.38■■□□□ 1.33
PTCH2-202ENST00000438067 ZNF496Q96IT1 587 aaPredicted RBP23.38■■□□□ 1.33
PTCH2-202ENST00000438067 LMNB1P20700 586 aa23.37■■□□□ 1.33
PTCH2-202ENST00000438067 HTRA3P83110 453 aa23.37■■□□□ 1.33
PTCH2-202ENST00000438067 BICDL1Q6ZP65 573 aa23.37■■□□□ 1.33
PTCH2-202ENST00000438067 ZC3H4Q9UPT8 1303 aaKnown RBP23.36■■□□□ 1.33
PTCH2-202ENST00000438067 A0A087WZG4 1122 aa23.36■■□□□ 1.33
PTCH2-202ENST00000438067 H0YIN7 160 aa23.36■■□□□ 1.33
PTCH2-202ENST00000438067 U2SURPO15042 1029 aaKnown RBP23.36■■□□□ 1.33
PTCH2-202ENST00000438067 PRELPP51888 382 aa23.36■■□□□ 1.33
PTCH2-202ENST00000438067 TEFQ10587 303 aa23.36■■□□□ 1.33
PTCH2-202ENST00000438067 ZNF790Q6PG37 636 aa23.36■■□□□ 1.33
PTCH2-202ENST00000438067 GNAT3A8MTJ3 354 aa23.35■■□□□ 1.33
PTCH2-202ENST00000438067 CNGB1Q14028 1251 aaPredicted RBP23.35■■□□□ 1.33
PTCH2-202ENST00000438067 TEX13AQ9BXU3 409 aaPredicted RBP23.35■■□□□ 1.33
PTCH2-202ENST00000438067 GAS2L2Q8NHY3 880 aa23.34■■□□□ 1.33
PTCH2-202ENST00000438067 CARMIL3Q8ND23 1372 aa23.34■■□□□ 1.33
PTCH2-202ENST00000438067 NRXN2Q9P2S2 1712 aa23.33■■□□□ 1.33
PTCH2-202ENST00000438067 NPC1L1Q9UHC9 1359 aa23.33■■□□□ 1.33
PTCH2-202ENST00000438067 HEG1Q9ULI3 1381 aa23.33■■□□□ 1.33
PTCH2-202ENST00000438067 TBC1D9BQ66K14 1250 aa23.33■■□□□ 1.33
PTCH2-202ENST00000438067 KLRG1Q96E93 195 aa23.33■■□□□ 1.33
PTCH2-202ENST00000438067 COL3A1P02461 1466 aaPredicted RBP23.32■■□□□ 1.32
PTCH2-202ENST00000438067 GLTPD2A6NH11 291 aa23.32■■□□□ 1.32
PTCH2-202ENST00000438067 SMC1BQ8NDV3 1235 aa23.32■■□□□ 1.32
PTCH2-202ENST00000438067 TBC1D2BQ9UPU7 963 aa23.32■■□□□ 1.32
PTCH2-202ENST00000438067 AFDNP55196 1824 aaKnown RBP23.31■■□□□ 1.32
PTCH2-202ENST00000438067 NFKBIEO00221 500 aa23.31■■□□□ 1.32
PTCH2-202ENST00000438067 VEGFAP15692 232 aaPredicted RBP23.31■■□□□ 1.32
PTCH2-202ENST00000438067 BRIP1Q9BX63 1249 aa23.31■■□□□ 1.32
PTCH2-202ENST00000438067 SBF1O95248 1867 aa23.3■■□□□ 1.32
PTCH2-202ENST00000438067 IL6STP40189 918 aaPredicted RBP23.3■■□□□ 1.32
PTCH2-202ENST00000438067 JMYQ8N9B5 988 aa23.3■■□□□ 1.32
PTCH2-202ENST00000438067 ZNF330Q9Y3S2 320 aaPredicted RBP23.3■■□□□ 1.32
PTCH2-202ENST00000438067 UBR2Q8IWV8 1755 aa23.29■■□□□ 1.32
PTCH2-202ENST00000438067 A1BGP04217 495 aa23.29■■□□□ 1.32
PTCH2-202ENST00000438067 PDE6BP35913 854 aa23.29■■□□□ 1.32
PTCH2-202ENST00000438067 ZNF622Q969S3 477 aaKnown RBP eCLIP23.29■■□□□ 1.32
PTCH2-202ENST00000438067 FMNL2Q96PY5 1086 aa23.29■■□□□ 1.32
PTCH2-202ENST00000438067 PDZRN3Q9UPQ7 1066 aa23.29■■□□□ 1.32
PTCH2-202ENST00000438067 PRR5LQ6MZQ0 368 aa23.28■■□□□ 1.32
PTCH2-202ENST00000438067 CCDC24Q8N4L8 307 aa23.28■■□□□ 1.32
PTCH2-202ENST00000438067 PHACTR3Q96KR7 559 aa23.28■■□□□ 1.32
PTCH2-202ENST00000438067 WDR90Q96KV7 1748 aa23.28■■□□□ 1.32
PTCH2-202ENST00000438067 CEMIPQ8WUJ3 1361 aa23.27■■□□□ 1.31
PTCH2-202ENST00000438067 KCNQ3O43525 872 aa23.26■■□□□ 1.31
PTCH2-202ENST00000438067 NPM2Q86SE8 214 aaKnown RBP23.26■■□□□ 1.31
PTCH2-202ENST00000438067 VIRMAQ69YN4 1812 aaKnown RBP23.26■■□□□ 1.31
PTCH2-202ENST00000438067 TNRC6CQ9HCJ0 1690 aaKnown RBP23.25■■□□□ 1.31
PTCH2-202ENST00000438067 BTBD11A6QL63 1104 aa23.25■■□□□ 1.31
PTCH2-202ENST00000438067 C21orf2O43822 256 aa23.25■■□□□ 1.31
PTCH2-202ENST00000438067 CAMTA2O94983 1202 aa23.25■■□□□ 1.31
PTCH2-202ENST00000438067 SETDB2Q96T68 719 aa23.25■■□□□ 1.31
PTCH2-202ENST00000438067 ZNF219Q9P2Y4 722 aaPredicted RBP23.25■■□□□ 1.31
PTCH2-202ENST00000438067 PRKAR2BP31323 418 aa23.24■■□□□ 1.31
PTCH2-202ENST00000438067 DLEC1Q9Y238 1755 aa23.23■■□□□ 1.31
PTCH2-202ENST00000438067 POTECB2RU33 542 aa23.23■■□□□ 1.31
PTCH2-202ENST00000438067 DPY19L2Q6NUT2 758 aa23.23■■□□□ 1.31
PTCH2-202ENST00000438067 RSPH6AQ9H0K4 717 aa23.23■■□□□ 1.31
PTCH2-202ENST00000438067 CNBD1Q8NA66 436 aa23.22■■□□□ 1.31
PTCH2-202ENST00000438067 CFAP53Q96M91 514 aa23.22■■□□□ 1.31
PTCH2-202ENST00000438067 USP16Q9Y5T5 823 aa23.22■■□□□ 1.31
PTCH2-202ENST00000438067 ERFEQ4G0M1 354 aa23.21■■□□□ 1.31
PTCH2-202ENST00000438067 DZIP3Q86Y13 1208 aaKnown RBP23.21■■□□□ 1.31
PTCH2-202ENST00000438067 PCNTO95613 3336 aa23.2■■□□□ 1.3
PTCH2-202ENST00000438067 NPHP1O15259 732 aa23.2■■□□□ 1.3
PTCH2-202ENST00000438067 CNKSR1Q969H4 720 aa23.2■■□□□ 1.3
PTCH2-202ENST00000438067 SRGNP10124 158 aa23.19■■□□□ 1.3
PTCH2-202ENST00000438067 PIP4K2AP48426 406 aaPredicted RBP23.19■■□□□ 1.3
PTCH2-202ENST00000438067 COL13A1Q5TAT6 717 aaPredicted RBP23.19■■□□□ 1.3
PTCH2-202ENST00000438067 STYK1Q6J9G0 422 aa23.19■■□□□ 1.3
PTCH2-202ENST00000438067 NUDCQ9Y266 331 aa23.19■■□□□ 1.3
PTCH2-202ENST00000438067 LTBP3Q9NS15 1303 aa23.18■■□□□ 1.3
PTCH2-202ENST00000438067 PRAMEF22A3QJZ6 481 aa23.18■■□□□ 1.3
PTCH2-202ENST00000438067 ST5P78524 1137 aa23.18■■□□□ 1.3
PTCH2-202ENST00000438067 SIPA1L3O60292 1781 aaPredicted RBP23.17■■□□□ 1.3
PTCH2-202ENST00000438067 SCN7AQ01118 1682 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms