RNA–Protein interactions for RNA: ENST00000435497.1

LINC00028-201, long intergenic non-protein coding RNA 28, humanhuman

TSL 2 BASIC

Gene LINC00028, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00028-201ENST00000435497 BCL2L12Q9HB09 334 aa18.53■□□□□ 0.56
LINC00028-201ENST00000435497 RRAGCQ9HB90 399 aa18.53■□□□□ 0.56
LINC00028-201ENST00000435497 AFDNP55196 1824 aaKnown RBP18.52■□□□□ 0.56
LINC00028-201ENST00000435497 HMOX1P09601 288 aa18.52■□□□□ 0.56
LINC00028-201ENST00000435497 NARFQ9UHQ1 456 aa18.52■□□□□ 0.56
LINC00028-201ENST00000435497 ZBTB1Q9Y2K1 713 aa18.52■□□□□ 0.56
LINC00028-201ENST00000435497 VIRMAQ69YN4 1812 aaKnown RBP18.51■□□□□ 0.55
LINC00028-201ENST00000435497 MTHFSDQ2M296 383 aaKnown RBP18.51■□□□□ 0.55
LINC00028-201ENST00000435497 MRC1P22897 1456 aa18.51■□□□□ 0.55
LINC00028-201ENST00000435497 KDM2BQ8NHM5 1336 aa18.5■□□□□ 0.55
LINC00028-201ENST00000435497 WDR90Q96KV7 1748 aa18.5■□□□□ 0.55
LINC00028-201ENST00000435497 PRELPP51888 382 aa18.5■□□□□ 0.55
LINC00028-201ENST00000435497 FSTL1Q12841 308 aa18.5■□□□□ 0.55
LINC00028-201ENST00000435497 C16orf71Q8IYS4 520 aaPredicted RBP18.5■□□□□ 0.55
LINC00028-201ENST00000435497 RASSF7Q02833 373 aa18.49■□□□□ 0.55
LINC00028-201ENST00000435497 NRXN2Q9P2S2 1712 aa18.49■□□□□ 0.55
LINC00028-201ENST00000435497 COL15A1P39059 1388 aa18.48■□□□□ 0.55
LINC00028-201ENST00000435497 SERPINB2P05120 415 aa18.48■□□□□ 0.55
LINC00028-201ENST00000435497 PER1O15534 1290 aaPredicted RBP18.47■□□□□ 0.55
LINC00028-201ENST00000435497 VSIG10Q8N0Z9 540 aa18.47■□□□□ 0.55
LINC00028-201ENST00000435497 KLRG1Q96E93 195 aa18.47■□□□□ 0.55
LINC00028-201ENST00000435497 JMYQ8N9B5 988 aa18.46■□□□□ 0.55
LINC00028-201ENST00000435497 CANXP27824 592 aaKnown RBP18.45■□□□□ 0.54
LINC00028-201ENST00000435497 EIF5P55010 431 aaKnown RBP18.45■□□□□ 0.54
LINC00028-201ENST00000435497 KIF7Q2M1P5 1343 aa18.45■□□□□ 0.54
LINC00028-201ENST00000435497 CCDC88AQ3V6T2 1871 aa18.44■□□□□ 0.54
LINC00028-201ENST00000435497 DIAPH1O60610 1272 aaKnown RBP18.44■□□□□ 0.54
LINC00028-201ENST00000435497 LMNB1P20700 586 aa18.44■□□□□ 0.54
LINC00028-201ENST00000435497 TTLL6Q8N841 843 aa18.44■□□□□ 0.54
LINC00028-201ENST00000435497 TNRC6CQ9HCJ0 1690 aaKnown RBP18.44■□□□□ 0.54
LINC00028-201ENST00000435497 CARMIL3Q8ND23 1372 aa18.43■□□□□ 0.54
LINC00028-201ENST00000435497 PCNTO95613 3336 aa18.43■□□□□ 0.54
LINC00028-201ENST00000435497 UBR2Q8IWV8 1755 aa18.43■□□□□ 0.54
LINC00028-201ENST00000435497 DLEC1Q9Y238 1755 aa18.43■□□□□ 0.54
LINC00028-201ENST00000435497 C2CD5Q86YS7 1000 aa18.43■□□□□ 0.54
LINC00028-201ENST00000435497 ZC3H4Q9UPT8 1303 aaKnown RBP18.43■□□□□ 0.54
LINC00028-201ENST00000435497 GLTPD2A6NH11 291 aa18.42■□□□□ 0.54
LINC00028-201ENST00000435497 NFKBIEO00221 500 aa18.42■□□□□ 0.54
LINC00028-201ENST00000435497 CC2D1BQ5T0F9 858 aaKnown RBP18.42■□□□□ 0.54
LINC00028-201ENST00000435497 BICDL1Q6ZP65 573 aa18.42■□□□□ 0.54
LINC00028-201ENST00000435497 IL17REQ8NFR9 667 aa18.42■□□□□ 0.54
LINC00028-201ENST00000435497 H0YIN7 160 aa18.41■□□□□ 0.54
LINC00028-201ENST00000435497 TBC1D9BQ66K14 1250 aa18.41■□□□□ 0.54
LINC00028-201ENST00000435497 SMC1BQ8NDV3 1235 aa18.41■□□□□ 0.54
LINC00028-201ENST00000435497 ZNF496Q96IT1 587 aaPredicted RBP18.41■□□□□ 0.54
LINC00028-201ENST00000435497 POTECB2RU33 542 aa18.4■□□□□ 0.54
LINC00028-201ENST00000435497 STARD3NLO95772 234 aa18.4■□□□□ 0.54
LINC00028-201ENST00000435497 COL13A1Q5TAT6 717 aaPredicted RBP18.4■□□□□ 0.54
LINC00028-201ENST00000435497 VEGFAP15692 232 aaPredicted RBP18.39■□□□□ 0.53
LINC00028-201ENST00000435497 TTC5Q8N0Z6 440 aa18.39■□□□□ 0.53
LINC00028-201ENST00000435497 CCER1Q8TC90 406 aaPredicted RBP18.39■□□□□ 0.53
LINC00028-201ENST00000435497 ANKRD31Q8N7Z5 1873 aa18.39■□□□□ 0.53
LINC00028-201ENST00000435497 A0A087WZG4 1122 aa18.38■□□□□ 0.53
LINC00028-201ENST00000435497 ZNF790Q6PG37 636 aa18.38■□□□□ 0.53
LINC00028-201ENST00000435497 CCDC24Q8N4L8 307 aa18.38■□□□□ 0.53
LINC00028-201ENST00000435497 TBC1D2BQ9UPU7 963 aa18.38■□□□□ 0.53
LINC00028-201ENST00000435497 HEG1Q9ULI3 1381 aa18.38■□□□□ 0.53
LINC00028-201ENST00000435497 BRIP1Q9BX63 1249 aa18.37■□□□□ 0.53
LINC00028-201ENST00000435497 COL3A1P02461 1466 aaPredicted RBP18.37■□□□□ 0.53
LINC00028-201ENST00000435497 GNAT3A8MTJ3 354 aa18.36■□□□□ 0.53
LINC00028-201ENST00000435497 A1BGP04217 495 aa18.36■□□□□ 0.53
LINC00028-201ENST00000435497 TEFQ10587 303 aa18.36■□□□□ 0.53
LINC00028-201ENST00000435497 PRR5LQ6MZQ0 368 aa18.36■□□□□ 0.53
LINC00028-201ENST00000435497 ZNF622Q969S3 477 aaKnown RBP eCLIP18.36■□□□□ 0.53
LINC00028-201ENST00000435497 TEX13AQ9BXU3 409 aaPredicted RBP18.36■□□□□ 0.53
LINC00028-201ENST00000435497 SIPA1L3O60292 1781 aaPredicted RBP18.35■□□□□ 0.53
LINC00028-201ENST00000435497 U2SURPO15042 1029 aaKnown RBP18.35■□□□□ 0.53
LINC00028-201ENST00000435497 KCNQ3O43525 872 aa18.35■□□□□ 0.53
LINC00028-201ENST00000435497 C21orf2O43822 256 aa18.35■□□□□ 0.53
LINC00028-201ENST00000435497 IL6STP40189 918 aaPredicted RBP18.35■□□□□ 0.53
LINC00028-201ENST00000435497 ZNF219Q9P2Y4 722 aaPredicted RBP18.35■□□□□ 0.53
LINC00028-201ENST00000435497 PDE6BP35913 854 aa18.34■□□□□ 0.53
LINC00028-201ENST00000435497 GAS2L2Q8NHY3 880 aa18.34■□□□□ 0.53
LINC00028-201ENST00000435497 ZNF330Q9Y3S2 320 aaPredicted RBP18.34■□□□□ 0.53
LINC00028-201ENST00000435497 FER1L6Q2WGJ9 1857 aa18.34■□□□□ 0.53
LINC00028-201ENST00000435497 TIAM2Q8IVF5 1701 aa18.34■□□□□ 0.53
LINC00028-201ENST00000435497 DICER1Q9UPY3 1922 aaKnown RBP18.33■□□□□ 0.53
LINC00028-201ENST00000435497 CAMTA2O94983 1202 aa18.33■□□□□ 0.52
LINC00028-201ENST00000435497 CNGB1Q14028 1251 aaPredicted RBP18.33■□□□□ 0.52
LINC00028-201ENST00000435497 PHACTR3Q96KR7 559 aa18.33■□□□□ 0.52
LINC00028-201ENST00000435497 PDZRN3Q9UPQ7 1066 aa18.33■□□□□ 0.52
LINC00028-201ENST00000435497 COL11A2P13942 1736 aaPredicted RBP18.32■□□□□ 0.52
LINC00028-201ENST00000435497 FMNL2Q96PY5 1086 aa18.32■□□□□ 0.52
LINC00028-201ENST00000435497 SCN7AQ01118 1682 aa18.31■□□□□ 0.52
LINC00028-201ENST00000435497 CEMIPQ8WUJ3 1361 aa18.31■□□□□ 0.52
LINC00028-201ENST00000435497 NPC1L1Q9UHC9 1359 aa18.31■□□□□ 0.52
LINC00028-201ENST00000435497 SLX4Q8IY92 1834 aa18.31■□□□□ 0.52
LINC00028-201ENST00000435497 ERFEQ4G0M1 354 aa18.31■□□□□ 0.52
LINC00028-201ENST00000435497 DPY19L2Q6NUT2 758 aa18.31■□□□□ 0.52
LINC00028-201ENST00000435497 SETDB2Q96T68 719 aa18.3■□□□□ 0.52
LINC00028-201ENST00000435497 USP16Q9Y5T5 823 aa18.3■□□□□ 0.52
LINC00028-201ENST00000435497 LTBP3Q9NS15 1303 aa18.29■□□□□ 0.52
LINC00028-201ENST00000435497 SRGNP10124 158 aa18.29■□□□□ 0.52
LINC00028-201ENST00000435497 PIP4K2AP48426 406 aaPredicted RBP18.29■□□□□ 0.52
LINC00028-201ENST00000435497 PRAMEF22A3QJZ6 481 aa18.28■□□□□ 0.52
LINC00028-201ENST00000435497 BTBD11A6QL63 1104 aa18.28■□□□□ 0.52
LINC00028-201ENST00000435497 STYK1Q6J9G0 422 aa18.28■□□□□ 0.52
LINC00028-201ENST00000435497 DZIP3Q86Y13 1208 aaKnown RBP18.28■□□□□ 0.52
LINC00028-201ENST00000435497 CNBD1Q8NA66 436 aa18.28■□□□□ 0.52
LINC00028-201ENST00000435497 RSPH6AQ9H0K4 717 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms